Gene annotation
Transcriptome id Sobic.004G247700.1
Synonym Sb04g028755
Functional annotation expressed protein
UniProt C5XZA6
Pfam -
Panther DB PTHR34780 PTHR34780:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g50110.1 : expressed protein
MaizeGDB (Corn) Zm00025a032667
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G482800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
2 Sobic.008G188400 GNS1/SUR4 membrane family protein, putative, expressed -
3 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
4 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
6 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
7 Sobic.007G138100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
8 Sobic.003G284100 expressed protein -
9 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
10 Sobic.010G043250 - -
11 Sobic.003G335300 E2F-related protein, putative, expressed -
12 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
13 Sobic.005G042900 expressed protein -
14 Sobic.001G505700 expressed protein -
15 Sobic.004G127000 - -
16 Sobic.009G157800 transporter family protein, putative, expressed -
17 Sobic.009G189700 - -
18 Sobic.007G219500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
19 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
20 Sobic.004G173700 SLL1 protein, putative, expressed -


Gene co-expression network
sample Sobic004G247700 Sobic004G247700 Sobic001G482800 Sobic001G482800 Sobic004G247700--Sobic001G482800 Sobic008G188400 Sobic008G188400 Sobic004G247700--Sobic008G188400 Sobic003G212000 Sobic003G212000 Sobic004G247700--Sobic003G212000 Sobic002G113200 Sobic002G113200 Sobic004G247700--Sobic002G113200 Sobic003G137600 Sobic003G137600 Sobic004G247700--Sobic003G137600 Sobic001G365700 Sobic001G365700 Sobic004G247700--Sobic001G365700 Sobic007G138100 Sobic007G138100 Sobic004G247700--Sobic007G138100 Sobic003G284100 Sobic003G284100 Sobic004G247700--Sobic003G284100 Sobic004G247500 Sobic004G247500 Sobic004G247700--Sobic004G247500 Sobic001G482800--Sobic004G247700 Sobic003G335300 Sobic003G335300 Sobic001G482800--Sobic003G335300 Sobic001G482800--Sobic001G365700 Sobic004G232500 Sobic004G232500 Sobic001G482800--Sobic004G232500 Sobic001G482800--Sobic008G188400 Sobic001G482800--Sobic003G137600 Sobic006G118400 Sobic006G118400 Sobic001G482800--Sobic006G118400 Sobic001G482800--Sobic004G247500 Sobic001G482800--Sobic003G284100 Sobic008G188400--Sobic004G247700 Sobic008G188400--Sobic001G482800 Sobic008G188400--Sobic004G232500 Sobic008G188400--Sobic001G365700 Sobic008G188400--Sobic003G335300 Sobic007G219500 Sobic007G219500 Sobic008G188400--Sobic007G219500 Sobic004G173700 Sobic004G173700 Sobic008G188400--Sobic004G173700 Sobic008G188400--Sobic003G284100 Sobic008G040400 Sobic008G040400 Sobic008G188400--Sobic008G040400 Sobic003G234500 Sobic003G234500 Sobic003G212000--Sobic003G234500 Sobic008G071300 Sobic008G071300 Sobic003G212000--Sobic008G071300 Sobic003G212000--Sobic002G113200 Sobic006G267100 Sobic006G267100 Sobic003G212000--Sobic006G267100 Sobic009G189700 Sobic009G189700 Sobic003G212000--Sobic009G189700 Sobic005G144000 Sobic005G144000 Sobic003G212000--Sobic005G144000 Sobic001G503600 Sobic001G503600 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic002G170100 Sobic002G170100 Sobic003G212000--Sobic002G170100 Sobic002G113200--Sobic003G212000 Sobic002G113200--Sobic008G071300 Sobic002G113200--Sobic003G234500 Sobic009G157800 Sobic009G157800 Sobic002G113200--Sobic009G157800 Sobic004G279200 Sobic004G279200 Sobic002G113200--Sobic004G279200 Sobic002G113200--Sobic001G503600 Sobic002G113200--Sobic006G267100 Sobic002G113200--Sobic003G284100 Sobic010G043250 Sobic010G043250 Sobic002G113200--Sobic010G043250 Sobic003G137600--Sobic004G173700 Sobic003G137600--Sobic003G212000 Sobic003G137600--Sobic003G234500 Sobic006G120900 Sobic006G120900 Sobic003G137600--Sobic006G120900 Sobic003G137600--Sobic002G113200 Sobic003G137600--Sobic001G365700 Sobic007G212100 Sobic007G212100 Sobic003G137600--Sobic007G212100 Sobic003G137600--Sobic003G284100 Sobic003G137600--Sobic009G189700 Sobic001G365700--Sobic003G335300 Sobic001G365700--Sobic004G173700 Sobic004G127000 Sobic004G127000 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G365700--Sobic001G482800 Sobic010G216400 Sobic010G216400 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic001G365700--Sobic004G232500 Sobic001G365700--Sobic010G043250 Sobic007G138100--Sobic002G113200 Sobic007G138100--Sobic003G212000 Sobic007G138100--Sobic003G137600 Sobic007G138000 Sobic007G138000 Sobic007G138100--Sobic007G138000 Sobic007G138100--Sobic003G234500 Sobic003G040700 Sobic003G040700 Sobic007G138100--Sobic003G040700 Sobic007G138100--Sobic008G071300 Sobic007G138100--Sobic006G120900 Sobic007G138100--Sobic006G267100 Sobic003G284100--Sobic003G212000 Sobic003G284100--Sobic002G113200 Sobic003G013700 Sobic003G013700 Sobic003G284100--Sobic003G013700 Sobic003G089100 Sobic003G089100 Sobic003G284100--Sobic003G089100 Sobic006G070564 Sobic006G070564 Sobic003G284100--Sobic006G070564 Sobic003G284100--Sobic004G279200 Sobic003G284100--Sobic004G247500 Sobic003G284100--Sobic009G157800 Sobic003G284100--Sobic003G137600 Sobic001G303900 Sobic001G303900 Sobic004G247500--Sobic001G303900 Sobic004G247500--Sobic009G157800 Sobic004G247500--Sobic009G189700 Sobic004G247500--Sobic006G070564 Sobic003G340000 Sobic003G340000 Sobic004G247500--Sobic003G340000 Sobic008G050900 Sobic008G050900 Sobic004G247500--Sobic008G050900 Sobic004G247500--Sobic005G144000 Sobic005G074300 Sobic005G074300 Sobic004G247500--Sobic005G074300 Sobic009G176600 Sobic009G176600 Sobic004G247500--Sobic009G176600
Octagon: transcription factors


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