Gene annotation
Transcriptome id Sobic.001G505700.1
Synonym Sb01g047210
Functional annotation expressed protein
UniProt C5WXZ7
Pfam -
Panther DB PTHR33115 PTHR33115:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18980 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os12g34360.1 : expressed protein
MaizeGDB (Corn) Zm00025a002577 , Zm00025a025554 , Zm00025a000614 , Zm00025a002576
Brachypodium KQK21594 , KQK23688 , PNT64520
Barley HORVU4Hr1G079120.1 , HORVU6Hr1G080490.4 , HORVU6Hr1G080490.3 , HORVU6Hr1G080490.2 , HORVU6Hr1G080490.1
Wheat TraesCS6A02G331900 , TraesCS5D02G248400 , TraesCS6D02G311200 , TraesCS6B02G362700 , TraesCS5B02G239900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G247700 expressed protein -
2 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
3 Sobic.001G482800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
4 Sobic.007G219500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
5 Sobic.010G216400 expressed protein -
6 Sobic.004G127000 - -
7 Sobic.008G188400 GNS1/SUR4 membrane family protein, putative, expressed -
8 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
9 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.009G176400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.009G176600 cytokinin-O-glucosyltransferase 2, putative, expressed -
12 Sobic.010G043250 - -
13 Sobic.003G284100 expressed protein -
14 Sobic.007G138100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
15 Sobic.003G335300 E2F-related protein, putative, expressed -
16 Sobic.009G157800 transporter family protein, putative, expressed -
17 Sobic.002G361500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Indole-acetic acid (IAA)-amido synthetase(PubMedID : 30367619)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
18 Sobic.004G173700 SLL1 protein, putative, expressed -
19 Sobic.001G303900 CPuORF23 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
20 Sobic.005G185200 - -


Gene co-expression network
sample Sobic001G505700 Sobic001G505700 Sobic004G247700 Sobic004G247700 Sobic001G505700--Sobic004G247700 Sobic004G247500 Sobic004G247500 Sobic001G505700--Sobic004G247500 Sobic001G482800 Sobic001G482800 Sobic001G505700--Sobic001G482800 Sobic007G219500 Sobic007G219500 Sobic001G505700--Sobic007G219500 Sobic010G216400 Sobic010G216400 Sobic001G505700--Sobic010G216400 Sobic004G127000 Sobic004G127000 Sobic001G505700--Sobic004G127000 Sobic008G188400 Sobic008G188400 Sobic001G505700--Sobic008G188400 Sobic001G365700 Sobic001G365700 Sobic001G505700--Sobic001G365700 Sobic002G113200 Sobic002G113200 Sobic001G505700--Sobic002G113200 Sobic004G247700--Sobic001G482800 Sobic004G247700--Sobic008G188400 Sobic003G212000 Sobic003G212000 Sobic004G247700--Sobic003G212000 Sobic004G247700--Sobic002G113200 Sobic003G137600 Sobic003G137600 Sobic004G247700--Sobic003G137600 Sobic004G247700--Sobic001G365700 Sobic007G138100 Sobic007G138100 Sobic004G247700--Sobic007G138100 Sobic003G284100 Sobic003G284100 Sobic004G247700--Sobic003G284100 Sobic004G247700--Sobic004G247500 Sobic001G303900 Sobic001G303900 Sobic004G247500--Sobic001G303900 Sobic009G157800 Sobic009G157800 Sobic004G247500--Sobic009G157800 Sobic009G189700 Sobic009G189700 Sobic004G247500--Sobic009G189700 Sobic006G070564 Sobic006G070564 Sobic004G247500--Sobic006G070564 Sobic003G340000 Sobic003G340000 Sobic004G247500--Sobic003G340000 Sobic008G050900 Sobic008G050900 Sobic004G247500--Sobic008G050900 Sobic005G144000 Sobic005G144000 Sobic004G247500--Sobic005G144000 Sobic005G074300 Sobic005G074300 Sobic004G247500--Sobic005G074300 Sobic009G176600 Sobic009G176600 Sobic004G247500--Sobic009G176600 Sobic001G482800--Sobic004G247700 Sobic003G335300 Sobic003G335300 Sobic001G482800--Sobic003G335300 Sobic001G482800--Sobic001G365700 Sobic004G232500 Sobic004G232500 Sobic001G482800--Sobic004G232500 Sobic001G482800--Sobic008G188400 Sobic001G482800--Sobic003G137600 Sobic006G118400 Sobic006G118400 Sobic001G482800--Sobic006G118400 Sobic001G482800--Sobic004G247500 Sobic001G482800--Sobic003G284100 Sobic007G219500--Sobic002G113200 Sobic007G219500--Sobic003G284100 Sobic004G173700 Sobic004G173700 Sobic007G219500--Sobic004G173700 Sobic003G005100 Sobic003G005100 Sobic007G219500--Sobic003G005100 Sobic007G219500--Sobic008G188400 Sobic007G219500--Sobic003G212000 Sobic010G159000 Sobic010G159000 Sobic007G219500--Sobic010G159000 Sobic005G019100 Sobic005G019100 Sobic007G219500--Sobic005G019100 Sobic007G219500--Sobic004G247700 Sobic010G216400--Sobic001G365700 Sobic009G069600 Sobic009G069600 Sobic010G216400--Sobic009G069600 Sobic010G216400--Sobic004G232500 Sobic010G031000 Sobic010G031000 Sobic010G216400--Sobic010G031000 Sobic003G273000 Sobic003G273000 Sobic010G216400--Sobic003G273000 Sobic009G176400 Sobic009G176400 Sobic010G216400--Sobic009G176400 Sobic010G216400--Sobic003G335300 Sobic010G216400--Sobic004G173700 Sobic010G216400--Sobic001G482800 Sobic004G127000--Sobic001G365700 Sobic004G127000--Sobic002G113200 Sobic010G043250 Sobic010G043250 Sobic004G127000--Sobic010G043250 Sobic004G127000--Sobic003G137600 Sobic004G127000--Sobic004G173700 Sobic004G127000--Sobic003G284100 Sobic004G127000--Sobic003G212000 Sobic004G127000--Sobic004G247700 Sobic003G139200 Sobic003G139200 Sobic004G127000--Sobic003G139200 Sobic008G188400--Sobic004G247700 Sobic008G188400--Sobic001G482800 Sobic008G188400--Sobic004G232500 Sobic008G188400--Sobic001G365700 Sobic008G188400--Sobic003G335300 Sobic008G188400--Sobic007G219500 Sobic008G188400--Sobic004G173700 Sobic008G188400--Sobic003G284100 Sobic008G040400 Sobic008G040400 Sobic008G188400--Sobic008G040400 Sobic001G365700--Sobic003G335300 Sobic001G365700--Sobic004G173700 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G365700--Sobic001G482800 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic001G365700--Sobic004G232500 Sobic001G365700--Sobic010G043250 Sobic002G113200--Sobic003G212000 Sobic008G071300 Sobic008G071300 Sobic002G113200--Sobic008G071300 Sobic003G234500 Sobic003G234500 Sobic002G113200--Sobic003G234500 Sobic002G113200--Sobic009G157800 Sobic004G279200 Sobic004G279200 Sobic002G113200--Sobic004G279200 Sobic001G503600 Sobic001G503600 Sobic002G113200--Sobic001G503600 Sobic006G267100 Sobic006G267100 Sobic002G113200--Sobic006G267100 Sobic002G113200--Sobic003G284100 Sobic002G113200--Sobic010G043250
Octagon: transcription factors


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