Gene annotation
Transcriptome id Sobic.001G303900.1
Synonym Sb01g029590
Functional annotation CPuORF23 - conserved peptide uORF-containing transcript, expressed
UniProt C5WSJ2
Pfam PF02358
Panther DB PTHR10788 PTHR10788:SF38
NCBI CDD -
KEGG Orthology K01087; trehalose 6-phosphate phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT4G22590 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os10g40550.1 : CPuORF23 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a051998
Brachypodium PNT67855 , KQJ97742
Barley -
Wheat TraesCS1A02G210400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
2 Sobic.009G189700 - -
3 Sobic.005G050400 syntaxin 6, putative, expressed -
4 Sobic.004G120500 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
5 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
6 Sobic.005G144000 glycosyltransferase, putative, expressed -
7 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.001G342101 - -
9 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
10 Sobic.006G070564 - K01193: INV, beta-fructofuranosidase
11 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
12 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
13 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
14 Sobic.003G340000 expressed protein -
15 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
16 Sobic.004G173700 SLL1 protein, putative, expressed -
17 Sobic.008G050900 expressed protein -
18 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
19 Sobic.004G253200 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
20 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G303900 Sobic001G303900 Sobic004G247500 Sobic004G247500 Sobic001G303900--Sobic004G247500 Sobic009G189700 Sobic009G189700 Sobic001G303900--Sobic009G189700 Sobic005G050400 Sobic005G050400 Sobic001G303900--Sobic005G050400 Sobic004G120500 Sobic004G120500 Sobic001G303900--Sobic004G120500 Sobic003G013700 Sobic003G013700 Sobic001G303900--Sobic003G013700 Sobic005G144000 Sobic005G144000 Sobic001G303900--Sobic005G144000 Sobic003G089100 Sobic003G089100 Sobic001G303900--Sobic003G089100 Sobic001G342101 Sobic001G342101 Sobic001G303900--Sobic001G342101 Sobic002G420600 Sobic002G420600 Sobic001G303900--Sobic002G420600 Sobic004G247500--Sobic001G303900 Sobic009G157800 Sobic009G157800 Sobic004G247500--Sobic009G157800 Sobic004G247500--Sobic009G189700 Sobic006G070564 Sobic006G070564 Sobic004G247500--Sobic006G070564 Sobic003G340000 Sobic003G340000 Sobic004G247500--Sobic003G340000 Sobic008G050900 Sobic008G050900 Sobic004G247500--Sobic008G050900 Sobic004G247500--Sobic005G144000 Sobic005G074300 Sobic005G074300 Sobic004G247500--Sobic005G074300 Sobic009G176600 Sobic009G176600 Sobic004G247500--Sobic009G176600 Sobic009G189700--Sobic005G144000 Sobic002G170100 Sobic002G170100 Sobic009G189700--Sobic002G170100 Sobic001G503600 Sobic001G503600 Sobic009G189700--Sobic001G503600 Sobic008G071300 Sobic008G071300 Sobic009G189700--Sobic008G071300 Sobic006G272400 Sobic006G272400 Sobic009G189700--Sobic006G272400 Sobic001G039100 Sobic001G039100 Sobic009G189700--Sobic001G039100 Sobic009G242200 Sobic009G242200 Sobic009G189700--Sobic009G242200 Sobic003G441000 Sobic003G441000 Sobic009G189700--Sobic003G441000 Sobic005G042900 Sobic005G042900 Sobic009G189700--Sobic005G042900 Sobic001G112600 Sobic001G112600 Sobic005G050400--Sobic001G112600 Sobic001G072000 Sobic001G072000 Sobic005G050400--Sobic001G072000 Sobic008G156600 Sobic008G156600 Sobic005G050400--Sobic008G156600 Sobic005G050400--Sobic009G242200 Sobic005G050400--Sobic002G170100 Sobic005G050400--Sobic003G441000 Sobic004G007400 Sobic004G007400 Sobic005G050400--Sobic004G007400 Sobic005G050400--Sobic005G144000 Sobic009G163100 Sobic009G163100 Sobic005G050400--Sobic009G163100 Sobic004G253200 Sobic004G253200 Sobic004G120500--Sobic004G253200 Sobic004G120500--Sobic009G189700 Sobic008G055600 Sobic008G055600 Sobic004G120500--Sobic008G055600 Sobic004G120500--Sobic005G144000 Sobic001G350100 Sobic001G350100 Sobic004G120500--Sobic001G350100 Sobic003G187700 Sobic003G187700 Sobic004G120500--Sobic003G187700 Sobic004G120500--Sobic002G170100 Sobic004G120500--Sobic001G503600 Sobic009G119600 Sobic009G119600 Sobic004G120500--Sobic009G119600 Sobic004G261800 Sobic004G261800 Sobic003G013700--Sobic004G261800 Sobic003G013700--Sobic005G050400 Sobic003G013700--Sobic001G072000 Sobic003G013700--Sobic008G156600 Sobic003G013700--Sobic003G089100 Sobic003G013700--Sobic009G163100 Sobic001G322400 Sobic001G322400 Sobic003G013700--Sobic001G322400 Sobic002G172401 Sobic002G172401 Sobic003G013700--Sobic002G172401 Sobic003G013700--Sobic001G112600 Sobic005G144000--Sobic003G441000 Sobic005G144000--Sobic002G170100 Sobic008G122800 Sobic008G122800 Sobic005G144000--Sobic008G122800 Sobic001G279000 Sobic001G279000 Sobic005G144000--Sobic001G279000 Sobic005G144000--Sobic009G242200 Sobic005G144000--Sobic001G503600 Sobic004G180100 Sobic004G180100 Sobic005G144000--Sobic004G180100 Sobic005G144000--Sobic008G071300 Sobic002G404600 Sobic002G404600 Sobic005G144000--Sobic002G404600 Sobic003G201500 Sobic003G201500 Sobic003G089100--Sobic003G201500 Sobic003G089100--Sobic003G013700 Sobic003G260600 Sobic003G260600 Sobic003G089100--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic003G089100--Sobic002G255400 Sobic004G113600 Sobic004G113600 Sobic003G089100--Sobic004G113600 Sobic001G400000 Sobic001G400000 Sobic003G089100--Sobic001G400000 Sobic003G089100--Sobic002G420600 Sobic003G089100--Sobic005G050400 Sobic001G356200 Sobic001G356200 Sobic003G089100--Sobic001G356200 Sobic001G342101--Sobic008G055600 Sobic001G342101--Sobic005G144000 Sobic001G342101--Sobic003G187700 Sobic001G342101--Sobic004G253200 Sobic001G342101--Sobic003G441000 Sobic001G342101--Sobic001G279000 Sobic010G189432 Sobic010G189432 Sobic001G342101--Sobic010G189432 Sobic001G342101--Sobic005G050400 Sobic001G342101--Sobic001G400000 Sobic002G420600--Sobic003G089100 Sobic004G173700 Sobic004G173700 Sobic002G420600--Sobic004G173700 Sobic006G120900 Sobic006G120900 Sobic002G420600--Sobic006G120900 Sobic002G420600--Sobic003G201500 Sobic002G352200 Sobic002G352200 Sobic002G420600--Sobic002G352200 Sobic002G420600--Sobic002G255400 Sobic002G420600--Sobic001G303900 Sobic002G420600--Sobic003G260600 Sobic003G372200 Sobic003G372200 Sobic002G420600--Sobic003G372200
Octagon: transcription factors


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