Gene annotation
Transcriptome id Sobic.004G173700.2
Synonym Sb04g022430
Functional annotation SLL1 protein, putative, expressed
UniProt A0A1Z5RNF3
Pfam -
Panther DB PTHR36003 PTHR36003:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72020 : -
RAP-DB (Rice) LOC_Os04g35300.1 : SLL1 protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ99845
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
2 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
3 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
4 Sobic.001G387200 expressed protein -
5 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
6 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
7 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.001G303900 CPuORF23 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
9 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
10 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
11 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
12 Sobic.003G335300 E2F-related protein, putative, expressed -
13 Sobic.003G139200 - -
14 Sobic.002G228900 RNA recognition motif containing protein, putative, expressed -
15 Sobic.003G284100 expressed protein -
16 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
18 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
19 Sobic.004G165200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family protein, putative, expressed -
20 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase


Gene co-expression network
sample Sobic004G173700 Sobic004G173700 Sobic003G137600 Sobic003G137600 Sobic004G173700--Sobic003G137600 Sobic006G120900 Sobic006G120900 Sobic004G173700--Sobic006G120900 Sobic002G420600 Sobic002G420600 Sobic004G173700--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic004G173700--Sobic001G387200 Sobic001G365700 Sobic001G365700 Sobic004G173700--Sobic001G365700 Sobic003G129900 Sobic003G129900 Sobic004G173700--Sobic003G129900 Sobic007G212100 Sobic007G212100 Sobic004G173700--Sobic007G212100 Sobic001G303900 Sobic001G303900 Sobic004G173700--Sobic001G303900 Sobic008G018300 Sobic008G018300 Sobic004G173700--Sobic008G018300 Sobic003G137600--Sobic004G173700 Sobic003G212000 Sobic003G212000 Sobic003G137600--Sobic003G212000 Sobic003G234500 Sobic003G234500 Sobic003G137600--Sobic003G234500 Sobic003G137600--Sobic006G120900 Sobic002G113200 Sobic002G113200 Sobic003G137600--Sobic002G113200 Sobic003G137600--Sobic001G365700 Sobic003G137600--Sobic007G212100 Sobic003G284100 Sobic003G284100 Sobic003G137600--Sobic003G284100 Sobic009G189700 Sobic009G189700 Sobic003G137600--Sobic009G189700 Sobic006G120900--Sobic004G173700 Sobic006G120900--Sobic003G234500 Sobic003G089100 Sobic003G089100 Sobic006G120900--Sobic003G089100 Sobic006G120900--Sobic003G129900 Sobic003G380300 Sobic003G380300 Sobic006G120900--Sobic003G380300 Sobic006G120900--Sobic003G212000 Sobic006G120900--Sobic001G387200 Sobic006G120900--Sobic002G420600 Sobic006G120900--Sobic003G137600 Sobic002G420600--Sobic003G089100 Sobic002G420600--Sobic004G173700 Sobic002G420600--Sobic006G120900 Sobic003G201500 Sobic003G201500 Sobic002G420600--Sobic003G201500 Sobic002G352200 Sobic002G352200 Sobic002G420600--Sobic002G352200 Sobic002G255400 Sobic002G255400 Sobic002G420600--Sobic002G255400 Sobic002G420600--Sobic001G303900 Sobic003G260600 Sobic003G260600 Sobic002G420600--Sobic003G260600 Sobic003G372200 Sobic003G372200 Sobic002G420600--Sobic003G372200 Sobic001G387200--Sobic003G129900 Sobic004G093600 Sobic004G093600 Sobic001G387200--Sobic004G093600 Sobic001G387200--Sobic006G120900 Sobic001G387200--Sobic004G173700 Sobic001G387200--Sobic008G018300 Sobic004G256700 Sobic004G256700 Sobic001G387200--Sobic004G256700 Sobic001G387200--Sobic002G255400 Sobic001G387200--Sobic002G420600 Sobic005G019100 Sobic005G019100 Sobic001G387200--Sobic005G019100 Sobic003G335300 Sobic003G335300 Sobic001G365700--Sobic003G335300 Sobic001G365700--Sobic004G173700 Sobic004G127000 Sobic004G127000 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G482800 Sobic001G482800 Sobic001G365700--Sobic001G482800 Sobic010G216400 Sobic010G216400 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic004G232500 Sobic004G232500 Sobic001G365700--Sobic004G232500 Sobic010G043250 Sobic010G043250 Sobic001G365700--Sobic010G043250 Sobic003G129900--Sobic001G387200 Sobic003G129900--Sobic004G093600 Sobic003G129900--Sobic006G120900 Sobic003G129900--Sobic005G019100 Sobic003G129900--Sobic004G173700 Sobic003G129900--Sobic004G256700 Sobic003G129900--Sobic002G420600 Sobic003G034900 Sobic003G034900 Sobic003G129900--Sobic003G034900 Sobic001G518500 Sobic001G518500 Sobic003G129900--Sobic001G518500 Sobic009G176400 Sobic009G176400 Sobic007G212100--Sobic009G176400 Sobic007G212100--Sobic004G173700 Sobic007G212100--Sobic003G137600 Sobic007G212100--Sobic004G232500 Sobic010G250300 Sobic010G250300 Sobic007G212100--Sobic010G250300 Sobic004G232700 Sobic004G232700 Sobic007G212100--Sobic004G232700 Sobic003G139200 Sobic003G139200 Sobic007G212100--Sobic003G139200 Sobic004G247500 Sobic004G247500 Sobic007G212100--Sobic004G247500 Sobic004G165200 Sobic004G165200 Sobic007G212100--Sobic004G165200 Sobic001G303900--Sobic004G247500 Sobic001G303900--Sobic009G189700 Sobic005G050400 Sobic005G050400 Sobic001G303900--Sobic005G050400 Sobic004G120500 Sobic004G120500 Sobic001G303900--Sobic004G120500 Sobic003G013700 Sobic003G013700 Sobic001G303900--Sobic003G013700 Sobic005G144000 Sobic005G144000 Sobic001G303900--Sobic005G144000 Sobic001G303900--Sobic003G089100 Sobic001G342101 Sobic001G342101 Sobic001G303900--Sobic001G342101 Sobic001G303900--Sobic002G420600 Sobic008G018300--Sobic002G255400 Sobic008G018300--Sobic002G352200 Sobic008G018300--Sobic001G387200 Sobic008G018300--Sobic004G173700 Sobic008G018300--Sobic002G420600 Sobic008G018300--Sobic003G260600 Sobic001G282200 Sobic001G282200 Sobic008G018300--Sobic001G282200 Sobic008G018300--Sobic003G129900 Sobic003G016300 Sobic003G016300 Sobic008G018300--Sobic003G016300
Octagon: transcription factors


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