Gene annotation
Transcriptome id Sobic.004G165200.1,Sobic.004G165200.2
Synonym Sb04g021660
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
hydrolase, alpha/beta fold family protein, putative, expressed
UniProt C5XTE6 , A0A1Z5RNW1
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF819
NCBI CDD KOG4409; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) KOG1454Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48410 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os04g33590.1,LOC_Os02g32970.1 : hydrolase, alpha/beta fold family protein, putative, expressed
MaizeGDB (Corn) Zm00025a020539 , Zm00025a011527 , Zm00025a011529
Brachypodium KQJ99723 , KQJ99724
Barley HORVU1Hr1G074380.9 , HORVU1Hr1G074380.8 , HORVU1Hr1G074380.7 , HORVU1Hr1G074380.6 , HORVU1Hr1G074380.5 , HORVU1Hr1G074380.4 , HORVU1Hr1G074380.3 , HORVU7Hr1G050150.2 , HORVU1Hr1G074380.22 , HORVU1Hr1G074380.23 , HORVU1Hr1G074380.20 , HORVU1Hr1G074380.21 , HORVU1Hr1G024040.1 , HORVU2Hr1G072830.4 , HORVU2Hr1G072830.5 , HORVU2Hr1G072830.6 , HORVU2Hr1G072830.1 , HORVU2Hr1G072830.3 , HORVU1Hr1G074380.17 , HORVU1Hr1G074380.16 , HORVU1Hr1G074380.15 , HORVU1Hr1G074380.14 , HORVU1Hr1G074380.12 , HORVU1Hr1G074380.11 , HORVU1Hr1G074380.19 , HORVU1Hr1G074380.18 , HORVU6Hr1G033060.8 , HORVU6Hr1G033060.1 , HORVU6Hr1G033060.2 , HORVU6Hr1G033060.3 , HORVU6Hr1G033060.4 , HORVU6Hr1G033060.5 , HORVU6Hr1G033060.6 , HORVU6Hr1G033060.7
Wheat TraesCS6D02G152300 , TraesCS2A02G294400 , TraesCS2B02G310800 , TraesCS1A02G268900 , TraesCS2D02G292100 , TraesCS6A02G160400 , TraesCS1D02G269000 , TraesCS6B02G191000
Populus -


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cDNA sequences
Sobic.004G165200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G173700 SLL1 protein, putative, expressed -
2 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
4 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
5 Sobic.002G228900 RNA recognition motif containing protein, putative, expressed -
6 Sobic.003G139200 - -
7 Sobic.001G303900 CPuORF23 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
8 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
9 Sobic.003G202400 expressed protein -
10 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
12 Sobic.003G284100 expressed protein -
13 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
14 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
15 Sobic.009G176400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
17 Sobic.009G157800 transporter family protein, putative, expressed -
18 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
19 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
20 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit


Gene co-expression network
sample Sobic004G165200 Sobic004G165200 Sobic004G173700 Sobic004G173700 Sobic004G165200--Sobic004G173700 Sobic007G212100 Sobic007G212100 Sobic004G165200--Sobic007G212100 Sobic003G137600 Sobic003G137600 Sobic004G165200--Sobic003G137600 Sobic006G120900 Sobic006G120900 Sobic004G165200--Sobic006G120900 Sobic002G228900 Sobic002G228900 Sobic004G165200--Sobic002G228900 Sobic003G139200 Sobic003G139200 Sobic004G165200--Sobic003G139200 Sobic001G303900 Sobic001G303900 Sobic004G165200--Sobic001G303900 Sobic002G420600 Sobic002G420600 Sobic004G165200--Sobic002G420600 Sobic003G202400 Sobic003G202400 Sobic004G165200--Sobic003G202400 Sobic004G173700--Sobic003G137600 Sobic004G173700--Sobic006G120900 Sobic004G173700--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic004G173700--Sobic001G387200 Sobic001G365700 Sobic001G365700 Sobic004G173700--Sobic001G365700 Sobic003G129900 Sobic003G129900 Sobic004G173700--Sobic003G129900 Sobic004G173700--Sobic007G212100 Sobic004G173700--Sobic001G303900 Sobic008G018300 Sobic008G018300 Sobic004G173700--Sobic008G018300 Sobic009G176400 Sobic009G176400 Sobic007G212100--Sobic009G176400 Sobic007G212100--Sobic004G173700 Sobic007G212100--Sobic003G137600 Sobic004G232500 Sobic004G232500 Sobic007G212100--Sobic004G232500 Sobic010G250300 Sobic010G250300 Sobic007G212100--Sobic010G250300 Sobic004G232700 Sobic004G232700 Sobic007G212100--Sobic004G232700 Sobic007G212100--Sobic003G139200 Sobic004G247500 Sobic004G247500 Sobic007G212100--Sobic004G247500 Sobic007G212100--Sobic004G165200 Sobic003G137600--Sobic004G173700 Sobic003G212000 Sobic003G212000 Sobic003G137600--Sobic003G212000 Sobic003G234500 Sobic003G234500 Sobic003G137600--Sobic003G234500 Sobic003G137600--Sobic006G120900 Sobic002G113200 Sobic002G113200 Sobic003G137600--Sobic002G113200 Sobic003G137600--Sobic001G365700 Sobic003G137600--Sobic007G212100 Sobic003G284100 Sobic003G284100 Sobic003G137600--Sobic003G284100 Sobic009G189700 Sobic009G189700 Sobic003G137600--Sobic009G189700 Sobic006G120900--Sobic004G173700 Sobic006G120900--Sobic003G234500 Sobic003G089100 Sobic003G089100 Sobic006G120900--Sobic003G089100 Sobic006G120900--Sobic003G129900 Sobic003G380300 Sobic003G380300 Sobic006G120900--Sobic003G380300 Sobic006G120900--Sobic003G212000 Sobic006G120900--Sobic001G387200 Sobic006G120900--Sobic002G420600 Sobic006G120900--Sobic003G137600 Sobic002G228900--Sobic004G173700 Sobic002G228900--Sobic002G113200 Sobic002G228900--Sobic003G212000 Sobic002G228900--Sobic003G284100 Sobic002G228900--Sobic003G234500 Sobic002G228900--Sobic003G137600 Sobic002G228900--Sobic003G089100 Sobic009G157800 Sobic009G157800 Sobic002G228900--Sobic009G157800 Sobic002G255400 Sobic002G255400 Sobic002G228900--Sobic002G255400 Sobic003G139200--Sobic004G173700 Sobic003G139200--Sobic003G137600 Sobic003G139200--Sobic006G120900 Sobic003G139200--Sobic007G212100 Sobic003G139200--Sobic002G113200 Sobic003G139200--Sobic004G247500 Sobic003G139200--Sobic001G303900 Sobic003G139200--Sobic003G212000 Sobic003G139200--Sobic009G189700 Sobic001G303900--Sobic004G247500 Sobic001G303900--Sobic009G189700 Sobic005G050400 Sobic005G050400 Sobic001G303900--Sobic005G050400 Sobic004G120500 Sobic004G120500 Sobic001G303900--Sobic004G120500 Sobic003G013700 Sobic003G013700 Sobic001G303900--Sobic003G013700 Sobic005G144000 Sobic005G144000 Sobic001G303900--Sobic005G144000 Sobic001G303900--Sobic003G089100 Sobic001G342101 Sobic001G342101 Sobic001G303900--Sobic001G342101 Sobic001G303900--Sobic002G420600 Sobic002G420600--Sobic003G089100 Sobic002G420600--Sobic004G173700 Sobic002G420600--Sobic006G120900 Sobic003G201500 Sobic003G201500 Sobic002G420600--Sobic003G201500 Sobic002G352200 Sobic002G352200 Sobic002G420600--Sobic002G352200 Sobic002G420600--Sobic002G255400 Sobic002G420600--Sobic001G303900 Sobic003G260600 Sobic003G260600 Sobic002G420600--Sobic003G260600 Sobic003G372200 Sobic003G372200 Sobic002G420600--Sobic003G372200 Sobic003G202400--Sobic003G089100 Sobic003G202400--Sobic003G212000 Sobic003G202400--Sobic002G420600 Sobic003G202400--Sobic003G137600 Sobic003G202400--Sobic003G234500 Sobic002G345000 Sobic002G345000 Sobic003G202400--Sobic002G345000 Sobic003G202400--Sobic003G284100 Sobic003G202400--Sobic003G013700 Sobic007G014700 Sobic007G014700 Sobic003G202400--Sobic007G014700
Octagon: transcription factors


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