Gene annotation
| Transcriptome id | Sobic.007G014700.3,Sobic.007G014700.1,Sobic.007G014700.2 |
|---|---|
| Synonym | Sb07g001320 |
| Functional annotation | Fructokinase-2 (Zm) (PubMedID : 27208977) kinase, pfkB family, putative, expressed |
| UniProt | A0A1B6PEZ4 , A0A1B6PEZ5 , A0A1B6PEY2 |
| Pfam | PF00294 |
| Panther DB | PTHR10584 PTHR10584:SF169 |
| NCBI CDD | KOG2855; Ribokinase |
| KEGG Orthology | K00847; E2.7.1.4, fructokinase |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT4G10260 : pfkB-like carbohydrate kinase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os08g02120.1 : kinase, pfkB family, putative, expressed |
| MaizeGDB (Corn) | Zm00025a026457 , Zm00025a040235 |
| Brachypodium | KQK10996 , KQJ94846 |
| Barley | HORVU7Hr1G076150.2 , HORVU7Hr1G076150.3 , HORVU7Hr1G076150.1 , HORVU1Hr1G083470.3 , HORVU5Hr1G076230.5 , HORVU5Hr1G076230.1 , HORVU5Hr1G076230.3 , HORVU1Hr1G083470.6 , HORVU1Hr1G083470.5 , HORVU1Hr1G083470.4 , HORVU1Hr1G083470.2 , HORVU1Hr1G083470.1 , HORVU5Hr1G114110.1 |
| Wheat | TraesCS5D02G293800 , TraesCS5B02G497600 , TraesCS5B02G497400 , TraesCS5B02G497500 , TraesCS7D02G315500 , TraesCS3A02G400000 , TraesCS7A02G319000 , TraesCS5B02G285500 , TraesCS5A02G484100 , TraesCS5D02G497600 , TraesCS5D02G497600 , TraesCS5A02G484000 , TraesCS3B02G433000 , TraesCS5A02G483900 , TraesCS3D02G394200 , TraesCS5A02G286200 , TraesCS7B02G219800 |
| Populus | - |
JBrowse
| Sobic.007G014700 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G261800 | sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed | K00895: pfp, diphosphate-dependent phosphofructokinase |
| 2 | Sobic.002G255400 | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed | K09569: FK506-binding protein 2 |
| 3 | Sobic.003G089100 | WD domain, G-beta repeat domain containing protein, expressed | - |
| 4 | Sobic.003G013700 | vacuolar ATP synthase subunit E, putative, expressed | K02150: ATPeV1E, V-type H+-transporting ATPase subunit E |
| 5 | Sobic.003G260600 | ATP synthase, putative, expressed | K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta |
| 6 | Sobic.002G420600 | nucleoside-triphosphatase, putative, expressed | - |
| 7 | Sobic.003G284100 | expressed protein | - |
| 8 | Sobic.002G352200 | succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed | K01899: succinyl-CoA synthetase alpha subunit |
| 9 | Sobic.001G303900 | CPuORF23 - conserved peptide uORF-containing transcript, expressed | K01087: trehalose 6-phosphate phosphatase |
| 10 | Sobic.003G201500 | outer mitochondrial membrane porin, putative, expressed | K15040: voltage-dependent anion channel protein 2 |
| 11 | Sobic.002G186200 | ASC1, putative, expressed | K04710: CERS1_2_3_4, ceramide synthetase |
| 12 | Sobic.004G173700 | SLL1 protein, putative, expressed | - |
| 13 | Sobic.004G247500 | "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed | K17991: peroxygenase |
| 14 | Sobic.001G543400 | phosphoglycerate mutase, putative, expressed | - |
| 15 | Sobic.004G017900 | ras-related protein, putative, expressed | K04392: Ras-related C3 botulinum toxin substrate 1 |
| 16 | Sobic.003G202400 | expressed protein | - |
| 17 | Sobic.005G050400 | syntaxin 6, putative, expressed | - |
| 18 | Sobic.008G132200 | tetratricopeptide repeat domain containing protein, expressed | - |
| 19 | Sobic.004G100100 | expressed protein | - |
| 20 | Sobic.001G400000 | NAD dependent epimerase/dehydratase family protein, putative, expressed | K12448: UXE, UDP-arabinose 4-epimerase |
Gene co-expression network
Octagon: transcription factors
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