Gene annotation
Transcriptome id Sobic.008G132200.1
Synonym Sb08g018430, NPG1
Functional annotation tetratricopeptide repeat domain containing protein, expressed
UniProt C5YPV7
Pfam PF13371 PF07719
Panther DB PTHR23083 PTHR23083:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G43040 : tetratricopeptide repeat (TPR)-containing protein
RAP-DB (Rice) LOC_Os12g37780.1 : tetratricopeptide repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a004182
Brachypodium PNT62502 , KQJ86278
Barley HORVU5Hr1G022220.3 , HORVU5Hr1G022220.2 , HORVU5Hr1G022220.1 , HORVU5Hr1G022220.7 , HORVU5Hr1G022220.6 , HORVU5Hr1G022220.5 , HORVU5Hr1G022220.4 , HORVU5Hr1G022220.9 , HORVU5Hr1G022220.8
Wheat TraesCS5D02G097700 , TraesCS5A02G085300 , TraesCS5B02G091500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G070300 expressed protein -
2 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
3 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
4 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
5 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
6 Sobic.002G167100 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
7 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
8 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
9 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
10 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
11 Sobic.004G017900 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
12 Sobic.003G200000 respiratory burst oxidase, putative, expressed -
13 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
14 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
15 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
16 Sobic.004G284800 protein kinase, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
17 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
18 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
19 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
20 Sobic.001G505600 DENN domain containing protein, expressed -


Gene co-expression network
sample Sobic008G132200 Sobic008G132200 Sobic002G070300 Sobic002G070300 Sobic008G132200--Sobic002G070300 Sobic003G260600 Sobic003G260600 Sobic008G132200--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic008G132200--Sobic002G255400 Sobic003G372200 Sobic003G372200 Sobic008G132200--Sobic003G372200 Sobic001G385000 Sobic001G385000 Sobic008G132200--Sobic001G385000 Sobic002G167100 Sobic002G167100 Sobic008G132200--Sobic002G167100 Sobic001G378800 Sobic001G378800 Sobic008G132200--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic008G132200--Sobic006G232800 Sobic010G253200 Sobic010G253200 Sobic008G132200--Sobic010G253200 Sobic002G070300--Sobic008G132200 Sobic007G118500 Sobic007G118500 Sobic002G070300--Sobic007G118500 Sobic001G543400 Sobic001G543400 Sobic002G070300--Sobic001G543400 Sobic002G070300--Sobic003G260600 Sobic001G011000 Sobic001G011000 Sobic002G070300--Sobic001G011000 Sobic003G159700 Sobic003G159700 Sobic002G070300--Sobic003G159700 Sobic002G154800 Sobic002G154800 Sobic002G070300--Sobic002G154800 Sobic002G070300--Sobic001G378800 Sobic002G153000 Sobic002G153000 Sobic002G070300--Sobic002G153000 Sobic003G260600--Sobic002G255400 Sobic003G201500 Sobic003G201500 Sobic003G260600--Sobic003G201500 Sobic003G089100 Sobic003G089100 Sobic003G260600--Sobic003G089100 Sobic003G260600--Sobic008G132200 Sobic003G260600--Sobic001G378800 Sobic003G260600--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic007G014700 Sobic007G014700 Sobic003G260600--Sobic007G014700 Sobic002G255400--Sobic003G260600 Sobic002G255400--Sobic003G089100 Sobic002G255400--Sobic007G014700 Sobic008G018300 Sobic008G018300 Sobic002G255400--Sobic008G018300 Sobic002G255400--Sobic002G420600 Sobic002G255400--Sobic003G201500 Sobic003G013700 Sobic003G013700 Sobic002G255400--Sobic003G013700 Sobic002G352200 Sobic002G352200 Sobic002G255400--Sobic002G352200 Sobic001G387200 Sobic001G387200 Sobic002G255400--Sobic001G387200 Sobic003G372200--Sobic001G378800 Sobic004G284800 Sobic004G284800 Sobic003G372200--Sobic004G284800 Sobic003G372200--Sobic003G201500 Sobic003G372200--Sobic003G260600 Sobic003G372200--Sobic003G089100 Sobic003G372200--Sobic002G420600 Sobic003G372200--Sobic002G167100 Sobic003G372200--Sobic006G232800 Sobic002G362500 Sobic002G362500 Sobic003G372200--Sobic002G362500 Sobic010G086300 Sobic010G086300 Sobic001G385000--Sobic010G086300 Sobic003G394500 Sobic003G394500 Sobic001G385000--Sobic003G394500 Sobic001G385000--Sobic006G232800 Sobic001G149000 Sobic001G149000 Sobic001G385000--Sobic001G149000 Sobic003G117800 Sobic003G117800 Sobic001G385000--Sobic003G117800 Sobic001G356200 Sobic001G356200 Sobic001G385000--Sobic001G356200 Sobic008G152700 Sobic008G152700 Sobic001G385000--Sobic008G152700 Sobic001G424800 Sobic001G424800 Sobic001G385000--Sobic001G424800 Sobic001G308500 Sobic001G308500 Sobic001G385000--Sobic001G308500 Sobic002G201700 Sobic002G201700 Sobic002G167100--Sobic002G201700 Sobic003G022000 Sobic003G022000 Sobic002G167100--Sobic003G022000 Sobic009G025700 Sobic009G025700 Sobic002G167100--Sobic009G025700 Sobic002G167100--Sobic003G372200 Sobic007G192500 Sobic007G192500 Sobic002G167100--Sobic007G192500 Sobic002G167100--Sobic001G385000 Sobic007G086600 Sobic007G086600 Sobic002G167100--Sobic007G086600 Sobic009G042000 Sobic009G042000 Sobic002G167100--Sobic009G042000 Sobic002G167100--Sobic010G086300 Sobic001G378800--Sobic006G232800 Sobic001G378800--Sobic003G394500 Sobic001G047600 Sobic001G047600 Sobic001G378800--Sobic001G047600 Sobic004G077300 Sobic004G077300 Sobic001G378800--Sobic004G077300 Sobic001G378800--Sobic001G356200 Sobic001G378800--Sobic003G372200 Sobic001G378800--Sobic001G424800 Sobic001G378800--Sobic003G260600 Sobic004G350700 Sobic004G350700 Sobic001G378800--Sobic004G350700 Sobic006G232800--Sobic001G378800 Sobic006G232800--Sobic001G385000 Sobic006G232800--Sobic003G394500 Sobic006G232800--Sobic001G149000 Sobic006G232800--Sobic010G086300 Sobic001G280500 Sobic001G280500 Sobic006G232800--Sobic001G280500 Sobic002G313100 Sobic002G313100 Sobic006G232800--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic006G232800--Sobic002G392400 Sobic006G265800 Sobic006G265800 Sobic006G232800--Sobic006G265800 Sobic002G420100 Sobic002G420100 Sobic010G253200--Sobic002G420100 Sobic004G241300 Sobic004G241300 Sobic010G253200--Sobic004G241300 Sobic003G423700 Sobic003G423700 Sobic010G253200--Sobic003G423700 Sobic008G104000 Sobic008G104000 Sobic010G253200--Sobic008G104000 Sobic010G253200--Sobic009G042000 Sobic002G186200 Sobic002G186200 Sobic010G253200--Sobic002G186200 Sobic004G261800 Sobic004G261800 Sobic010G253200--Sobic004G261800 Sobic008G073500 Sobic008G073500 Sobic010G253200--Sobic008G073500 Sobic002G308000 Sobic002G308000 Sobic010G253200--Sobic002G308000
Octagon: transcription factors


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