Gene annotation
Transcriptome id Sobic.007G048700.1
Synonym Sb07g003970
Functional annotation stomatin-like protein 2, putative, expressed
UniProt C5YHB6
Pfam PF16200 PF01145
Panther DB PTHR10264 PTHR10264:SF27
NCBI CDD KOG2620; Prohibitins and stomatins of the PID superfamily
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT4G27585 : SPFH/Band 7/PHB domain-containing membrane-associated protein family
RAP-DB (Rice) LOC_Os08g06200.1 : stomatin-like protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a030066 , Zm00025a055123
Brachypodium KQJ95315
Barley -
Wheat TraesCS4D02G000200 , TraesCS4D02G000200 , TraesCS4D02G000200
Populus -


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cDNA sequences
Sobic.007G048700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G167000 protein phosphotase protein, putative, expressed -
2 Sobic.002G070300 expressed protein -
3 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
4 Sobic.009G220000 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
5 Sobic.007G003100 transmembrane protein 18, putative, expressed -
6 Sobic.001G347700 protein phosphotase protein, putative, expressed -
7 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
8 Sobic.001G343000 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
9 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
10 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
11 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
12 Sobic.002G268700 hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
13 Sobic.001G348000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
14 Sobic.010G080900 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
15 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
16 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
17 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
18 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
19 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
20 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -


Gene co-expression network
sample Sobic007G048700 Sobic007G048700 Sobic003G167000 Sobic003G167000 Sobic007G048700--Sobic003G167000 Sobic002G070300 Sobic002G070300 Sobic007G048700--Sobic002G070300 Sobic001G035400 Sobic001G035400 Sobic007G048700--Sobic001G035400 Sobic009G220000 Sobic009G220000 Sobic007G048700--Sobic009G220000 Sobic007G003100 Sobic007G003100 Sobic007G048700--Sobic007G003100 Sobic001G347700 Sobic001G347700 Sobic007G048700--Sobic001G347700 Sobic008G132200 Sobic008G132200 Sobic007G048700--Sobic008G132200 Sobic001G343000 Sobic001G343000 Sobic007G048700--Sobic001G343000 Sobic001G013200 Sobic001G013200 Sobic007G048700--Sobic001G013200 Sobic003G167000--Sobic007G048700 Sobic003G167000--Sobic001G347700 Sobic003G167000--Sobic001G013200 Sobic003G167000--Sobic007G003100 Sobic009G218000 Sobic009G218000 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G113400 Sobic003G113400 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic006G153200 Sobic006G153200 Sobic003G167000--Sobic006G153200 Sobic002G070300--Sobic008G132200 Sobic007G118500 Sobic007G118500 Sobic002G070300--Sobic007G118500 Sobic001G543400 Sobic001G543400 Sobic002G070300--Sobic001G543400 Sobic003G260600 Sobic003G260600 Sobic002G070300--Sobic003G260600 Sobic001G011000 Sobic001G011000 Sobic002G070300--Sobic001G011000 Sobic003G159700 Sobic003G159700 Sobic002G070300--Sobic003G159700 Sobic002G154800 Sobic002G154800 Sobic002G070300--Sobic002G154800 Sobic001G378800 Sobic001G378800 Sobic002G070300--Sobic001G378800 Sobic002G153000 Sobic002G153000 Sobic002G070300--Sobic002G153000 Sobic004G344800 Sobic004G344800 Sobic001G035400--Sobic004G344800 Sobic006G203900 Sobic006G203900 Sobic001G035400--Sobic006G203900 Sobic008G084100 Sobic008G084100 Sobic001G035400--Sobic008G084100 Sobic007G092100 Sobic007G092100 Sobic001G035400--Sobic007G092100 Sobic009G164700 Sobic009G164700 Sobic001G035400--Sobic009G164700 Sobic002G087000 Sobic002G087000 Sobic001G035400--Sobic002G087000 Sobic001G073600 Sobic001G073600 Sobic001G035400--Sobic001G073600 Sobic001G443200 Sobic001G443200 Sobic001G035400--Sobic001G443200 Sobic001G116000 Sobic001G116000 Sobic001G035400--Sobic001G116000 Sobic009G220000--Sobic007G048700 Sobic003G075200 Sobic003G075200 Sobic009G220000--Sobic003G075200 Sobic004G069400 Sobic004G069400 Sobic009G220000--Sobic004G069400 Sobic006G271000 Sobic006G271000 Sobic009G220000--Sobic006G271000 Sobic003G261100 Sobic003G261100 Sobic009G220000--Sobic003G261100 Sobic004G356300 Sobic004G356300 Sobic009G220000--Sobic004G356300 Sobic002G352200 Sobic002G352200 Sobic009G220000--Sobic002G352200 Sobic004G007700 Sobic004G007700 Sobic009G220000--Sobic004G007700 Sobic001G135200 Sobic001G135200 Sobic009G220000--Sobic001G135200 Sobic004G039400 Sobic004G039400 Sobic007G003100--Sobic004G039400 Sobic007G003100--Sobic007G048700 Sobic007G003100--Sobic003G167000 Sobic009G112900 Sobic009G112900 Sobic007G003100--Sobic009G112900 Sobic007G003100--Sobic001G443200 Sobic009G206600 Sobic009G206600 Sobic007G003100--Sobic009G206600 Sobic001G060300 Sobic001G060300 Sobic007G003100--Sobic001G060300 Sobic007G003100--Sobic006G203900 Sobic010G040900 Sobic010G040900 Sobic007G003100--Sobic010G040900 Sobic001G347700--Sobic007G048700 Sobic001G347700--Sobic003G167000 Sobic001G352800 Sobic001G352800 Sobic001G347700--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic001G347700--Sobic001G485300 Sobic001G347700--Sobic003G260600 Sobic010G028400 Sobic010G028400 Sobic001G347700--Sobic010G028400 Sobic001G347700--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic001G347700--Sobic002G217500 Sobic004G040700 Sobic004G040700 Sobic001G347700--Sobic004G040700 Sobic008G132200--Sobic002G070300 Sobic008G132200--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic008G132200--Sobic002G255400 Sobic003G372200 Sobic003G372200 Sobic008G132200--Sobic003G372200 Sobic001G385000 Sobic001G385000 Sobic008G132200--Sobic001G385000 Sobic002G167100 Sobic002G167100 Sobic008G132200--Sobic002G167100 Sobic008G132200--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic008G132200--Sobic006G232800 Sobic010G253200 Sobic010G253200 Sobic008G132200--Sobic010G253200 Sobic007G146600 Sobic007G146600 Sobic001G343000--Sobic007G146600 Sobic003G393200 Sobic003G393200 Sobic001G343000--Sobic003G393200 Sobic001G343000--Sobic007G048700 Sobic002G182000 Sobic002G182000 Sobic001G343000--Sobic002G182000 Sobic007G030100 Sobic007G030100 Sobic001G343000--Sobic007G030100 Sobic001G343000--Sobic010G028400 Sobic001G343000--Sobic002G070300 Sobic001G343000--Sobic008G132200 Sobic001G012900 Sobic001G012900 Sobic001G343000--Sobic001G012900 Sobic001G013200--Sobic003G167000 Sobic001G013200--Sobic007G048700 Sobic001G013200--Sobic001G035400 Sobic008G014300 Sobic008G014300 Sobic001G013200--Sobic008G014300 Sobic001G013200--Sobic006G203900 Sobic001G013200--Sobic009G112900 Sobic003G131300 Sobic003G131300 Sobic001G013200--Sobic003G131300 Sobic010G197900 Sobic010G197900 Sobic001G013200--Sobic010G197900 Sobic001G013200--Sobic007G003100
Octagon: transcription factors


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