Gene annotation
Transcriptome id Sobic.009G220000.1,Sobic.009G220000.2
Synonym Sb09g027430, MTO2, TS
Functional annotation threonine synthase, chloroplast precursor, putative, expressed
UniProt C5YUZ5 , A0A1Z5R4U4
Pfam PF00291
Panther DB PTHR10314 PTHR10314:SF121
NCBI CDD -
KEGG Orthology K01733; threonine synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29840 : Pyridoxal-5\'-phosphate-dependent enzyme family protein
RAP-DB (Rice) LOC_Os05g47640.1 : threonine synthase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044447 , Zm00025a020201 , Zm00025a032252 , Zm00025a043178 , Zm00025a027929 , Zm00025a043177
Brachypodium KQK05047 , KQK09295
Barley HORVU1Hr1G082660.1 , HORVU3Hr1G064730.1 , HORVU3Hr1G064730.2
Wheat TraesCS3A02G259700 , TraesCS3B02G292900 , TraesCS1B02G391900 , TraesCS3D02G259800
Populus -


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cDNA sequences
Sobic.009G220000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
2 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
3 Sobic.004G069400 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
4 Sobic.006G271000 mis12 protein, expressed -
5 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
6 Sobic.004G356300 expressed protein -
7 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
8 Sobic.004G007700 pentatricopeptide, putative, expressed -
9 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
10 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
11 Sobic.002G387800 - K12456: anaphase-promoting complex subunit 13
12 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
13 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
14 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
15 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
16 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.002G268700 hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
18 Sobic.001G413100 nucleotide binding protein, putative, expressed -
19 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
20 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin


Gene co-expression network
sample Sobic009G220000 Sobic009G220000 Sobic007G048700 Sobic007G048700 Sobic009G220000--Sobic007G048700 Sobic003G075200 Sobic003G075200 Sobic009G220000--Sobic003G075200 Sobic004G069400 Sobic004G069400 Sobic009G220000--Sobic004G069400 Sobic006G271000 Sobic006G271000 Sobic009G220000--Sobic006G271000 Sobic003G261100 Sobic003G261100 Sobic009G220000--Sobic003G261100 Sobic004G356300 Sobic004G356300 Sobic009G220000--Sobic004G356300 Sobic002G352200 Sobic002G352200 Sobic009G220000--Sobic002G352200 Sobic004G007700 Sobic004G007700 Sobic009G220000--Sobic004G007700 Sobic001G135200 Sobic001G135200 Sobic009G220000--Sobic001G135200 Sobic003G167000 Sobic003G167000 Sobic007G048700--Sobic003G167000 Sobic002G070300 Sobic002G070300 Sobic007G048700--Sobic002G070300 Sobic001G035400 Sobic001G035400 Sobic007G048700--Sobic001G035400 Sobic007G048700--Sobic009G220000 Sobic007G003100 Sobic007G003100 Sobic007G048700--Sobic007G003100 Sobic001G347700 Sobic001G347700 Sobic007G048700--Sobic001G347700 Sobic008G132200 Sobic008G132200 Sobic007G048700--Sobic008G132200 Sobic001G343000 Sobic001G343000 Sobic007G048700--Sobic001G343000 Sobic001G013200 Sobic001G013200 Sobic007G048700--Sobic001G013200 Sobic003G075200--Sobic004G356300 Sobic001G352800 Sobic001G352800 Sobic003G075200--Sobic001G352800 Sobic008G057900 Sobic008G057900 Sobic003G075200--Sobic008G057900 Sobic010G188900 Sobic010G188900 Sobic003G075200--Sobic010G188900 Sobic003G075200--Sobic009G220000 Sobic002G153000 Sobic002G153000 Sobic003G075200--Sobic002G153000 Sobic002G090500 Sobic002G090500 Sobic003G075200--Sobic002G090500 Sobic003G075200--Sobic004G007700 Sobic006G153200 Sobic006G153200 Sobic003G075200--Sobic006G153200 Sobic001G286100 Sobic001G286100 Sobic004G069400--Sobic001G286100 Sobic001G140700 Sobic001G140700 Sobic004G069400--Sobic001G140700 Sobic002G268700 Sobic002G268700 Sobic004G069400--Sobic002G268700 Sobic001G413100 Sobic001G413100 Sobic004G069400--Sobic001G413100 Sobic002G232400 Sobic002G232400 Sobic004G069400--Sobic002G232400 Sobic002G304400 Sobic002G304400 Sobic004G069400--Sobic002G304400 Sobic004G069400--Sobic009G220000 Sobic006G119300 Sobic006G119300 Sobic004G069400--Sobic006G119300 Sobic009G244900 Sobic009G244900 Sobic004G069400--Sobic009G244900 Sobic006G271000--Sobic001G352800 Sobic002G153400 Sobic002G153400 Sobic006G271000--Sobic002G153400 Sobic006G271000--Sobic009G220000 Sobic006G271000--Sobic001G135200 Sobic001G192700 Sobic001G192700 Sobic006G271000--Sobic001G192700 Sobic006G271000--Sobic001G286100 Sobic010G002800 Sobic010G002800 Sobic006G271000--Sobic010G002800 Sobic001G348000 Sobic001G348000 Sobic006G271000--Sobic001G348000 Sobic005G210500 Sobic005G210500 Sobic006G271000--Sobic005G210500 Sobic001G370700 Sobic001G370700 Sobic003G261100--Sobic001G370700 Sobic002G131600 Sobic002G131600 Sobic003G261100--Sobic002G131600 Sobic001G057300 Sobic001G057300 Sobic003G261100--Sobic001G057300 Sobic006G035900 Sobic006G035900 Sobic003G261100--Sobic006G035900 Sobic009G115700 Sobic009G115700 Sobic003G261100--Sobic009G115700 Sobic007G191600 Sobic007G191600 Sobic003G261100--Sobic007G191600 Sobic004G155100 Sobic004G155100 Sobic003G261100--Sobic004G155100 Sobic001G214900 Sobic001G214900 Sobic003G261100--Sobic001G214900 Sobic001G501600 Sobic001G501600 Sobic003G261100--Sobic001G501600 Sobic004G356300--Sobic004G007700 Sobic001G011000 Sobic001G011000 Sobic004G356300--Sobic001G011000 Sobic004G356300--Sobic003G075200 Sobic002G367800 Sobic002G367800 Sobic004G356300--Sobic002G367800 Sobic004G356300--Sobic002G090500 Sobic004G356300--Sobic008G057900 Sobic001G176900 Sobic001G176900 Sobic004G356300--Sobic001G176900 Sobic010G134100 Sobic010G134100 Sobic004G356300--Sobic010G134100 Sobic002G071100 Sobic002G071100 Sobic004G356300--Sobic002G071100 Sobic002G420600 Sobic002G420600 Sobic002G352200--Sobic002G420600 Sobic003G016300 Sobic003G016300 Sobic002G352200--Sobic003G016300 Sobic008G018300 Sobic008G018300 Sobic002G352200--Sobic008G018300 Sobic002G255400 Sobic002G255400 Sobic002G352200--Sobic002G255400 Sobic004G173700 Sobic004G173700 Sobic002G352200--Sobic004G173700 Sobic003G260600 Sobic003G260600 Sobic002G352200--Sobic003G260600 Sobic009G224400 Sobic009G224400 Sobic002G352200--Sobic009G224400 Sobic002G124900 Sobic002G124900 Sobic002G352200--Sobic002G124900 Sobic001G073600 Sobic001G073600 Sobic002G352200--Sobic001G073600 Sobic004G007700--Sobic004G356300 Sobic010G018900 Sobic010G018900 Sobic004G007700--Sobic010G018900 Sobic004G007700--Sobic001G011000 Sobic004G007700--Sobic003G075200 Sobic004G007700--Sobic002G367800 Sobic010G080900 Sobic010G080900 Sobic004G007700--Sobic010G080900 Sobic004G007700--Sobic010G002800 Sobic007G140100 Sobic007G140100 Sobic004G007700--Sobic007G140100 Sobic001G167500 Sobic001G167500 Sobic004G007700--Sobic001G167500 Sobic003G044700 Sobic003G044700 Sobic001G135200--Sobic003G044700 Sobic001G135200--Sobic001G192700 Sobic001G135200--Sobic003G016300 Sobic004G261800 Sobic004G261800 Sobic001G135200--Sobic004G261800 Sobic001G135200--Sobic002G352200 Sobic004G100100 Sobic004G100100 Sobic001G135200--Sobic004G100100 Sobic001G135200--Sobic009G244900 Sobic005G185200 Sobic005G185200 Sobic001G135200--Sobic005G185200 Sobic001G135200--Sobic006G271000
Octagon: transcription factors


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