Gene annotation
Transcriptome id Sobic.001G413100.1
Synonym Sb01g038920
Functional annotation nucleotide binding protein, putative, expressed
UniProt C5WP89
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02740 : Ribosomal protein S24e family protein
RAP-DB (Rice) LOC_Os03g17450.1 : nucleotide binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a052716
Brachypodium KQK22243
Barley HORVU4Hr1G058010.1 , HORVU4Hr1G058010.2 , HORVU4Hr1G058010.3
Wheat TraesCS4A02G103600 , TraesCS4B02G200300 , TraesCS4D02G201400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G134100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
2 Sobic.001G167500 ribosomal protein L25, putative, expressed K02897: RP-L25, large subunit ribosomal protein L25
3 Sobic.009G041800 PPR repeat domain containing protein, putative, expressed -
4 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
5 Sobic.004G069400 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
6 Sobic.001G176900 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
7 Sobic.002G304400 expressed protein -
8 Sobic.003G388900 PPR repeat domain containing protein, putative, expressed -
9 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
10 Sobic.003G205400 ribosomal protein L25, putative, expressed K02897: RP-L25, large subunit ribosomal protein L25
11 Sobic.010G125100 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
12 Sobic.002G101000 mitochondrial prohibitin complex protein 2, putative, expressed K17081: prohibitin 2
13 Sobic.001G214900 expressed protein -
14 Sobic.004G356300 expressed protein -
15 Sobic.009G104100 peptidase, M24 family protein, putative, expressed -
16 Sobic.001G518600 fatty acid hydroxylase, putative, expressed K14424: plant 4alpha-monomethylsterol monooxygenase
17 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
18 Sobic.002G367800 PPR repeat domain containing protein, putative, expressed -
19 Sobic.006G029400 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.003G130000 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40


Gene co-expression network
sample Sobic001G413100 Sobic001G413100 Sobic010G134100 Sobic010G134100 Sobic001G413100--Sobic010G134100 Sobic001G167500 Sobic001G167500 Sobic001G413100--Sobic001G167500 Sobic009G041800 Sobic009G041800 Sobic001G413100--Sobic009G041800 Sobic008G084100 Sobic008G084100 Sobic001G413100--Sobic008G084100 Sobic004G069400 Sobic004G069400 Sobic001G413100--Sobic004G069400 Sobic001G176900 Sobic001G176900 Sobic001G413100--Sobic001G176900 Sobic002G304400 Sobic002G304400 Sobic001G413100--Sobic002G304400 Sobic003G388900 Sobic003G388900 Sobic001G413100--Sobic003G388900 Sobic003G388700 Sobic003G388700 Sobic001G413100--Sobic003G388700 Sobic010G134100--Sobic001G167500 Sobic010G134100--Sobic001G413100 Sobic010G134100--Sobic001G176900 Sobic001G214900 Sobic001G214900 Sobic010G134100--Sobic001G214900 Sobic001G493400 Sobic001G493400 Sobic010G134100--Sobic001G493400 Sobic004G356300 Sobic004G356300 Sobic010G134100--Sobic004G356300 Sobic002G367800 Sobic002G367800 Sobic010G134100--Sobic002G367800 Sobic010G134100--Sobic009G041800 Sobic004G082700 Sobic004G082700 Sobic010G134100--Sobic004G082700 Sobic001G167500--Sobic010G134100 Sobic001G167500--Sobic001G413100 Sobic001G167500--Sobic009G041800 Sobic001G167500--Sobic002G367800 Sobic001G167500--Sobic001G176900 Sobic003G130000 Sobic003G130000 Sobic001G167500--Sobic003G130000 Sobic001G167500--Sobic004G082700 Sobic010G197200 Sobic010G197200 Sobic001G167500--Sobic010G197200 Sobic001G167500--Sobic001G214900 Sobic009G041800--Sobic003G130000 Sobic004G212100 Sobic004G212100 Sobic009G041800--Sobic004G212100 Sobic001G011000 Sobic001G011000 Sobic009G041800--Sobic001G011000 Sobic009G041800--Sobic002G367800 Sobic009G041800--Sobic001G167500 Sobic009G041800--Sobic001G413100 Sobic001G268300 Sobic001G268300 Sobic009G041800--Sobic001G268300 Sobic003G113400 Sobic003G113400 Sobic009G041800--Sobic003G113400 Sobic009G041800--Sobic010G134100 Sobic010G277000 Sobic010G277000 Sobic008G084100--Sobic010G277000 Sobic001G035400 Sobic001G035400 Sobic008G084100--Sobic001G035400 Sobic003G238500 Sobic003G238500 Sobic008G084100--Sobic003G238500 Sobic001G073600 Sobic001G073600 Sobic008G084100--Sobic001G073600 Sobic007G048700 Sobic007G048700 Sobic008G084100--Sobic007G048700 Sobic001G370700 Sobic001G370700 Sobic008G084100--Sobic001G370700 Sobic008G084100--Sobic001G413100 Sobic002G232400 Sobic002G232400 Sobic008G084100--Sobic002G232400 Sobic006G203900 Sobic006G203900 Sobic008G084100--Sobic006G203900 Sobic001G286100 Sobic001G286100 Sobic004G069400--Sobic001G286100 Sobic001G140700 Sobic001G140700 Sobic004G069400--Sobic001G140700 Sobic002G268700 Sobic002G268700 Sobic004G069400--Sobic002G268700 Sobic004G069400--Sobic001G413100 Sobic004G069400--Sobic002G232400 Sobic004G069400--Sobic002G304400 Sobic009G220000 Sobic009G220000 Sobic004G069400--Sobic009G220000 Sobic006G119300 Sobic006G119300 Sobic004G069400--Sobic006G119300 Sobic009G244900 Sobic009G244900 Sobic004G069400--Sobic009G244900 Sobic001G176900--Sobic010G134100 Sobic001G176900--Sobic004G356300 Sobic001G176900--Sobic001G413100 Sobic001G176900--Sobic001G167500 Sobic001G176900--Sobic002G367800 Sobic001G176900--Sobic003G388700 Sobic004G184000 Sobic004G184000 Sobic001G176900--Sobic004G184000 Sobic004G007700 Sobic004G007700 Sobic001G176900--Sobic004G007700 Sobic003G075200 Sobic003G075200 Sobic001G176900--Sobic003G075200 Sobic002G304400--Sobic001G413100 Sobic008G118300 Sobic008G118300 Sobic002G304400--Sobic008G118300 Sobic002G304400--Sobic004G069400 Sobic007G112100 Sobic007G112100 Sobic002G304400--Sobic007G112100 Sobic002G304400--Sobic001G286100 Sobic002G304400--Sobic001G167500 Sobic001G336050 Sobic001G336050 Sobic002G304400--Sobic001G336050 Sobic001G521100 Sobic001G521100 Sobic002G304400--Sobic001G521100 Sobic001G081900 Sobic001G081900 Sobic002G304400--Sobic001G081900 Sobic003G388900--Sobic002G367800 Sobic002G402500 Sobic002G402500 Sobic003G388900--Sobic002G402500 Sobic001G522000 Sobic001G522000 Sobic003G388900--Sobic001G522000 Sobic003G202100 Sobic003G202100 Sobic003G388900--Sobic003G202100 Sobic003G388900--Sobic004G212100 Sobic001G304000 Sobic001G304000 Sobic003G388900--Sobic001G304000 Sobic002G295900 Sobic002G295900 Sobic003G388900--Sobic002G295900 Sobic003G388900--Sobic001G413100 Sobic003G205400 Sobic003G205400 Sobic003G388900--Sobic003G205400 Sobic007G119600 Sobic007G119600 Sobic003G388700--Sobic007G119600 Sobic003G388700--Sobic001G073600 Sobic003G135600 Sobic003G135600 Sobic003G388700--Sobic003G135600 Sobic009G191400 Sobic009G191400 Sobic003G388700--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic003G388700--Sobic002G079700 Sobic001G473400 Sobic001G473400 Sobic003G388700--Sobic001G473400 Sobic010G002800 Sobic010G002800 Sobic003G388700--Sobic010G002800 Sobic010G258000 Sobic010G258000 Sobic003G388700--Sobic010G258000 Sobic006G041800 Sobic006G041800 Sobic003G388700--Sobic006G041800
Octagon: transcription factors


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