Gene annotation
Transcriptome id Sobic.001G518600.1
Synonym SMO2-2, Sb01g048370, ATSMO2
Functional annotation fatty acid hydroxylase, putative, expressed
UniProt C5WZX0
Pfam PF04116
Panther DB PTHR11863 PTHR11863:SF27
NCBI CDD KOG0873; C-4 sterol methyl oxidase
KEGG Orthology K14424; plant 4alpha-monomethylsterol monooxygenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0006633fatty acid biosynthetic process GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G29390 : sterol 4-alpha-methyl-oxidase 2-2
RAP-DB (Rice) LOC_Os11g48020.1 : fatty acid hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a029058 , Zm00025a039025
Brachypodium KQJ87030
Barley -
Wheat TraesCS4A02G179800 , TraesCS4D02G134600 , TraesCS4B02G139900
Populus -


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cDNA sequences
Sobic.001G518600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G413100 nucleotide binding protein, putative, expressed -
2 Sobic.004G069400 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
3 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
4 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
5 Sobic.005G129201 - -
6 Sobic.001G167500 ribosomal protein L25, putative, expressed K02897: RP-L25, large subunit ribosomal protein L25
7 Sobic.008G072500 SAM-dependent methyltransferase, putative, expressed K18162: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5
8 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
9 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
10 Sobic.001G176900 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
11 Sobic.001G286100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
12 Sobic.002G304400 expressed protein -
13 Sobic.010G002800 AGAP000326-PA, putative, expressed K18163: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
14 Sobic.004G129100 lipase class 3 family protein, putative, expressed -
15 Sobic.003G028200 expressed protein -
16 Sobic.001G518200 - K06928: nucleoside-triphosphatase
17 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
18 Sobic.004G007700 pentatricopeptide, putative, expressed -
19 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
20 Sobic.004G356300 expressed protein -


Gene co-expression network
sample Sobic001G518600 Sobic001G518600 Sobic001G413100 Sobic001G413100 Sobic001G518600--Sobic001G413100 Sobic004G069400 Sobic004G069400 Sobic001G518600--Sobic004G069400 Sobic001G309200 Sobic001G309200 Sobic001G518600--Sobic001G309200 Sobic003G388700 Sobic003G388700 Sobic001G518600--Sobic003G388700 Sobic005G129201 Sobic005G129201 Sobic001G518600--Sobic005G129201 Sobic001G167500 Sobic001G167500 Sobic001G518600--Sobic001G167500 Sobic008G072500 Sobic008G072500 Sobic001G518600--Sobic008G072500 Sobic002G232400 Sobic002G232400 Sobic001G518600--Sobic002G232400 Sobic008G084100 Sobic008G084100 Sobic001G518600--Sobic008G084100 Sobic010G134100 Sobic010G134100 Sobic001G413100--Sobic010G134100 Sobic001G413100--Sobic001G167500 Sobic009G041800 Sobic009G041800 Sobic001G413100--Sobic009G041800 Sobic001G413100--Sobic008G084100 Sobic001G413100--Sobic004G069400 Sobic001G176900 Sobic001G176900 Sobic001G413100--Sobic001G176900 Sobic002G304400 Sobic002G304400 Sobic001G413100--Sobic002G304400 Sobic003G388900 Sobic003G388900 Sobic001G413100--Sobic003G388900 Sobic001G413100--Sobic003G388700 Sobic001G286100 Sobic001G286100 Sobic004G069400--Sobic001G286100 Sobic001G140700 Sobic001G140700 Sobic004G069400--Sobic001G140700 Sobic002G268700 Sobic002G268700 Sobic004G069400--Sobic002G268700 Sobic004G069400--Sobic001G413100 Sobic004G069400--Sobic002G232400 Sobic004G069400--Sobic002G304400 Sobic009G220000 Sobic009G220000 Sobic004G069400--Sobic009G220000 Sobic006G119300 Sobic006G119300 Sobic004G069400--Sobic006G119300 Sobic009G244900 Sobic009G244900 Sobic004G069400--Sobic009G244900 Sobic002G348400 Sobic002G348400 Sobic001G309200--Sobic002G348400 Sobic001G188000 Sobic001G188000 Sobic001G309200--Sobic001G188000 Sobic003G260600 Sobic003G260600 Sobic001G309200--Sobic003G260600 Sobic001G117900 Sobic001G117900 Sobic001G309200--Sobic001G117900 Sobic009G066200 Sobic009G066200 Sobic001G309200--Sobic009G066200 Sobic002G308000 Sobic002G308000 Sobic001G309200--Sobic002G308000 Sobic002G392400 Sobic002G392400 Sobic001G309200--Sobic002G392400 Sobic010G153400 Sobic010G153400 Sobic001G309200--Sobic010G153400 Sobic007G086600 Sobic007G086600 Sobic001G309200--Sobic007G086600 Sobic007G119600 Sobic007G119600 Sobic003G388700--Sobic007G119600 Sobic001G073600 Sobic001G073600 Sobic003G388700--Sobic001G073600 Sobic003G135600 Sobic003G135600 Sobic003G388700--Sobic003G135600 Sobic009G191400 Sobic009G191400 Sobic003G388700--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic003G388700--Sobic002G079700 Sobic001G473400 Sobic001G473400 Sobic003G388700--Sobic001G473400 Sobic010G002800 Sobic010G002800 Sobic003G388700--Sobic010G002800 Sobic010G258000 Sobic010G258000 Sobic003G388700--Sobic010G258000 Sobic006G041800 Sobic006G041800 Sobic003G388700--Sobic006G041800 Sobic004G184000 Sobic004G184000 Sobic005G129201--Sobic004G184000 Sobic007G173000 Sobic007G173000 Sobic005G129201--Sobic007G173000 Sobic002G367800 Sobic002G367800 Sobic005G129201--Sobic002G367800 Sobic003G004100 Sobic003G004100 Sobic005G129201--Sobic003G004100 Sobic001G533100 Sobic001G533100 Sobic005G129201--Sobic001G533100 Sobic001G116000 Sobic001G116000 Sobic005G129201--Sobic001G116000 Sobic001G088200 Sobic001G088200 Sobic005G129201--Sobic001G088200 Sobic004G007700 Sobic004G007700 Sobic005G129201--Sobic004G007700 Sobic004G034300 Sobic004G034300 Sobic005G129201--Sobic004G034300 Sobic001G167500--Sobic010G134100 Sobic001G167500--Sobic001G413100 Sobic001G167500--Sobic009G041800 Sobic001G167500--Sobic002G367800 Sobic001G167500--Sobic001G176900 Sobic003G130000 Sobic003G130000 Sobic001G167500--Sobic003G130000 Sobic004G082700 Sobic004G082700 Sobic001G167500--Sobic004G082700 Sobic010G197200 Sobic010G197200 Sobic001G167500--Sobic010G197200 Sobic001G214900 Sobic001G214900 Sobic001G167500--Sobic001G214900 Sobic003G049200 Sobic003G049200 Sobic008G072500--Sobic003G049200 Sobic008G072500--Sobic003G260600 Sobic010G133400 Sobic010G133400 Sobic008G072500--Sobic010G133400 Sobic001G378800 Sobic001G378800 Sobic008G072500--Sobic001G378800 Sobic002G193500 Sobic002G193500 Sobic008G072500--Sobic002G193500 Sobic006G232800 Sobic006G232800 Sobic008G072500--Sobic006G232800 Sobic003G048600 Sobic003G048600 Sobic008G072500--Sobic003G048600 Sobic007G118500 Sobic007G118500 Sobic008G072500--Sobic007G118500 Sobic010G086300 Sobic010G086300 Sobic008G072500--Sobic010G086300 Sobic002G153000 Sobic002G153000 Sobic002G232400--Sobic002G153000 Sobic002G090500 Sobic002G090500 Sobic002G232400--Sobic002G090500 Sobic001G352800 Sobic001G352800 Sobic002G232400--Sobic001G352800 Sobic001G192700 Sobic001G192700 Sobic002G232400--Sobic001G192700 Sobic002G232400--Sobic002G268700 Sobic002G232400--Sobic010G002800 Sobic004G218600 Sobic004G218600 Sobic002G232400--Sobic004G218600 Sobic002G232400--Sobic008G084100 Sobic010G018500 Sobic010G018500 Sobic002G232400--Sobic010G018500 Sobic010G277000 Sobic010G277000 Sobic008G084100--Sobic010G277000 Sobic001G035400 Sobic001G035400 Sobic008G084100--Sobic001G035400 Sobic003G238500 Sobic003G238500 Sobic008G084100--Sobic003G238500 Sobic008G084100--Sobic001G073600 Sobic007G048700 Sobic007G048700 Sobic008G084100--Sobic007G048700 Sobic001G370700 Sobic001G370700 Sobic008G084100--Sobic001G370700 Sobic008G084100--Sobic001G413100 Sobic008G084100--Sobic002G232400 Sobic006G203900 Sobic006G203900 Sobic008G084100--Sobic006G203900
Octagon: transcription factors


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