Gene annotation
Transcriptome id Sobic.005G129201.1
Synonym -
Functional annotation -
UniProt A0A1Z5RIE3
Pfam PF00300
Panther DB PTHR23029 PTHR23029:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26780 : Phosphoglycerate mutase family protein
RAP-DB (Rice) LOC_Os11g31880.1 : phosphoglycerate mutase, putative, expressed
MaizeGDB (Corn) Zm00025a029798
Brachypodium -
Barley HORVU4Hr1G037160.4 , HORVU4Hr1G037160.2 , HORVU4Hr1G037160.1
Wheat TraesCS4D02G149600 , TraesCS4B02G148700 , TraesCS4A02G160800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G184000 SFT2, putative, expressed -
2 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
3 Sobic.002G367800 PPR repeat domain containing protein, putative, expressed -
4 Sobic.003G004100 expressed protein -
5 Sobic.001G533100 GHMP kinases ATP-binding protein, putative, expressed K05305: fucokinase
6 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
7 Sobic.001G088200 strictosidine synthase, putative, expressed -
8 Sobic.004G007700 pentatricopeptide, putative, expressed -
9 Sobic.004G034300 transducin family protein, putative, expressed -
10 Sobic.001G518600 fatty acid hydroxylase, putative, expressed K14424: plant 4alpha-monomethylsterol monooxygenase
11 Sobic.001G522000 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
12 Sobic.003G202100 Uncharacterized ACR, COG1565 containing protein, putative, expressed K18164: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
13 Sobic.006G237200 vacuolar ATP synthase subunit D 1, putative, expressed K02149: ATPeV1D, V-type H+-transporting ATPase subunit D
14 Sobic.001G176900 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
15 Sobic.003G326900 expressed protein -
16 Sobic.004G336300 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
17 Sobic.008G072200 coatomer subunit delta, putative, expressed -
18 Sobic.002G254500 oxidoreductase, putative, expressed K18160: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
19 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
20 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -


Gene co-expression network
sample Sobic005G129201 Sobic005G129201 Sobic004G184000 Sobic004G184000 Sobic005G129201--Sobic004G184000 Sobic007G173000 Sobic007G173000 Sobic005G129201--Sobic007G173000 Sobic002G367800 Sobic002G367800 Sobic005G129201--Sobic002G367800 Sobic003G004100 Sobic003G004100 Sobic005G129201--Sobic003G004100 Sobic001G533100 Sobic001G533100 Sobic005G129201--Sobic001G533100 Sobic001G116000 Sobic001G116000 Sobic005G129201--Sobic001G116000 Sobic001G088200 Sobic001G088200 Sobic005G129201--Sobic001G088200 Sobic004G007700 Sobic004G007700 Sobic005G129201--Sobic004G007700 Sobic004G034300 Sobic004G034300 Sobic005G129201--Sobic004G034300 Sobic007G165300 Sobic007G165300 Sobic004G184000--Sobic007G165300 Sobic004G184000--Sobic005G129201 Sobic003G326900 Sobic003G326900 Sobic004G184000--Sobic003G326900 Sobic010G258000 Sobic010G258000 Sobic004G184000--Sobic010G258000 Sobic001G451901 Sobic001G451901 Sobic004G184000--Sobic001G451901 Sobic003G348200 Sobic003G348200 Sobic004G184000--Sobic003G348200 Sobic007G217400 Sobic007G217400 Sobic004G184000--Sobic007G217400 Sobic001G110300 Sobic001G110300 Sobic004G184000--Sobic001G110300 Sobic004G184000--Sobic001G116000 Sobic006G071628 Sobic006G071628 Sobic007G173000--Sobic006G071628 Sobic001G051300 Sobic001G051300 Sobic007G173000--Sobic001G051300 Sobic001G196000 Sobic001G196000 Sobic007G173000--Sobic001G196000 Sobic007G139500 Sobic007G139500 Sobic007G173000--Sobic007G139500 Sobic007G173000--Sobic005G129201 Sobic002G232400 Sobic002G232400 Sobic007G173000--Sobic002G232400 Sobic009G061000 Sobic009G061000 Sobic007G173000--Sobic009G061000 Sobic002G370400 Sobic002G370400 Sobic007G173000--Sobic002G370400 Sobic009G256700 Sobic009G256700 Sobic007G173000--Sobic009G256700 Sobic004G212100 Sobic004G212100 Sobic002G367800--Sobic004G212100 Sobic001G011000 Sobic001G011000 Sobic002G367800--Sobic001G011000 Sobic003G388900 Sobic003G388900 Sobic002G367800--Sobic003G388900 Sobic009G041800 Sobic009G041800 Sobic002G367800--Sobic009G041800 Sobic001G522000 Sobic001G522000 Sobic002G367800--Sobic001G522000 Sobic004G356300 Sobic004G356300 Sobic002G367800--Sobic004G356300 Sobic001G214900 Sobic001G214900 Sobic002G367800--Sobic001G214900 Sobic002G071100 Sobic002G071100 Sobic002G367800--Sobic002G071100 Sobic002G070300 Sobic002G070300 Sobic002G367800--Sobic002G070300 Sobic003G004100--Sobic005G129201 Sobic007G118500 Sobic007G118500 Sobic003G004100--Sobic007G118500 Sobic004G151200 Sobic004G151200 Sobic003G004100--Sobic004G151200 Sobic002G422400 Sobic002G422400 Sobic003G004100--Sobic002G422400 Sobic002G186300 Sobic002G186300 Sobic003G004100--Sobic002G186300 Sobic006G237200 Sobic006G237200 Sobic003G004100--Sobic006G237200 Sobic003G004100--Sobic002G367800 Sobic003G004100--Sobic004G007700 Sobic007G048700 Sobic007G048700 Sobic003G004100--Sobic007G048700 Sobic002G125800 Sobic002G125800 Sobic001G533100--Sobic002G125800 Sobic005G031000 Sobic005G031000 Sobic001G533100--Sobic005G031000 Sobic001G533100--Sobic004G034300 Sobic004G336300 Sobic004G336300 Sobic001G533100--Sobic004G336300 Sobic003G130900 Sobic003G130900 Sobic001G533100--Sobic003G130900 Sobic002G426100 Sobic002G426100 Sobic001G533100--Sobic002G426100 Sobic001G533100--Sobic005G129201 Sobic001G533100--Sobic007G173000 Sobic003G005900 Sobic003G005900 Sobic001G533100--Sobic003G005900 Sobic001G196100 Sobic001G196100 Sobic001G116000--Sobic001G196100 Sobic001G035400 Sobic001G035400 Sobic001G116000--Sobic001G035400 Sobic007G044400 Sobic007G044400 Sobic001G116000--Sobic007G044400 Sobic001G116000--Sobic007G048700 Sobic002G313600 Sobic002G313600 Sobic001G116000--Sobic002G313600 Sobic008G084100 Sobic008G084100 Sobic001G116000--Sobic008G084100 Sobic001G026600 Sobic001G026600 Sobic001G116000--Sobic001G026600 Sobic004G031800 Sobic004G031800 Sobic001G116000--Sobic004G031800 Sobic001G116000--Sobic004G184000 Sobic001G088200--Sobic005G129201 Sobic001G088200--Sobic003G004100 Sobic001G088200--Sobic001G522000 Sobic001G088200--Sobic004G184000 Sobic003G045000 Sobic003G045000 Sobic001G088200--Sobic003G045000 Sobic001G088200--Sobic004G007700 Sobic001G518600 Sobic001G518600 Sobic001G088200--Sobic001G518600 Sobic010G055400 Sobic010G055400 Sobic001G088200--Sobic010G055400 Sobic007G140100 Sobic007G140100 Sobic001G088200--Sobic007G140100 Sobic004G007700--Sobic004G356300 Sobic010G018900 Sobic010G018900 Sobic004G007700--Sobic010G018900 Sobic004G007700--Sobic001G011000 Sobic003G075200 Sobic003G075200 Sobic004G007700--Sobic003G075200 Sobic004G007700--Sobic002G367800 Sobic010G080900 Sobic010G080900 Sobic004G007700--Sobic010G080900 Sobic010G002800 Sobic010G002800 Sobic004G007700--Sobic010G002800 Sobic004G007700--Sobic007G140100 Sobic001G167500 Sobic001G167500 Sobic004G007700--Sobic001G167500 Sobic004G034300--Sobic004G336300 Sobic010G178600 Sobic010G178600 Sobic004G034300--Sobic010G178600 Sobic002G070600 Sobic002G070600 Sobic004G034300--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic004G034300--Sobic008G072200 Sobic005G059500 Sobic005G059500 Sobic004G034300--Sobic005G059500 Sobic009G118900 Sobic009G118900 Sobic004G034300--Sobic009G118900 Sobic003G334700 Sobic003G334700 Sobic004G034300--Sobic003G334700 Sobic004G034300--Sobic004G212100 Sobic001G012900 Sobic001G012900 Sobic004G034300--Sobic001G012900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.