Gene annotation
Transcriptome id Sobic.006G237200.1
Synonym Sb06g030400
Functional annotation vacuolar ATP synthase subunit D 1, putative, expressed
UniProt C5Y8Z9
Pfam PF01813
Panther DB PTHR11671 PTHR11671:SF1
NCBI CDD KOG1647; Vacuolar H+-ATPase V1 sector, subunit D
KEGG Orthology K02149; ATPeV1D, V-type H+-transporting ATPase subunit D
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58730 : vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)
RAP-DB (Rice) LOC_Os04g55040.1 : vacuolar ATP synthase subunit D 1, putative, expressed
MaizeGDB (Corn) Zm00025a009578 , Zm00025a054806
Brachypodium KQJ84912
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G237200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G410700 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
2 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
3 Sobic.008G021200 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
4 Sobic.007G161200 expressed protein -
5 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
6 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16
7 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -
8 Sobic.005G018800 expressed protein -
9 Sobic.001G110300 fb27, putative, expressed -
10 Sobic.004G184000 SFT2, putative, expressed -
11 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
12 Sobic.005G129201 - -
13 Sobic.005G055000 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
14 Sobic.004G060100 ATP synthase, putative, expressed K02145: ATPeV1A, V-type H+-transporting ATPase subunit A
15 Sobic.003G004100 expressed protein -
16 Sobic.001G473400 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed K11353: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
17 Sobic.004G283600 O-acyltransferase, putative, expressed K13519: LPT1, lysophospholipid acyltransferase
18 Sobic.004G244000 dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
19 Sobic.003G392600 expressed protein -
20 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1


Gene co-expression network
sample Sobic006G237200 Sobic006G237200 Sobic002G410700 Sobic002G410700 Sobic006G237200--Sobic002G410700 Sobic009G256000 Sobic009G256000 Sobic006G237200--Sobic009G256000 Sobic008G021200 Sobic008G021200 Sobic006G237200--Sobic008G021200 Sobic007G161200 Sobic007G161200 Sobic006G237200--Sobic007G161200 Sobic003G216500 Sobic003G216500 Sobic006G237200--Sobic003G216500 Sobic002G186300 Sobic002G186300 Sobic006G237200--Sobic002G186300 Sobic006G020900 Sobic006G020900 Sobic006G237200--Sobic006G020900 Sobic005G018800 Sobic005G018800 Sobic006G237200--Sobic005G018800 Sobic001G110300 Sobic001G110300 Sobic006G237200--Sobic001G110300 Sobic002G410700--Sobic003G216500 Sobic002G410700--Sobic006G237200 Sobic002G410700--Sobic009G256000 Sobic008G150300 Sobic008G150300 Sobic002G410700--Sobic008G150300 Sobic001G473400 Sobic001G473400 Sobic002G410700--Sobic001G473400 Sobic002G410700--Sobic006G020900 Sobic009G240700 Sobic009G240700 Sobic002G410700--Sobic009G240700 Sobic002G410700--Sobic007G161200 Sobic003G170300 Sobic003G170300 Sobic002G410700--Sobic003G170300 Sobic005G004100 Sobic005G004100 Sobic009G256000--Sobic005G004100 Sobic004G060100 Sobic004G060100 Sobic009G256000--Sobic004G060100 Sobic009G256000--Sobic008G021200 Sobic009G256000--Sobic007G161200 Sobic009G256000--Sobic005G018800 Sobic004G283600 Sobic004G283600 Sobic009G256000--Sobic004G283600 Sobic003G200800 Sobic003G200800 Sobic009G256000--Sobic003G200800 Sobic009G256000--Sobic002G410700 Sobic009G256000--Sobic006G237200 Sobic008G021200--Sobic005G018800 Sobic008G021200--Sobic004G060100 Sobic008G021200--Sobic003G200800 Sobic008G021200--Sobic009G256000 Sobic008G021200--Sobic007G161200 Sobic008G021200--Sobic004G283600 Sobic008G021200--Sobic006G237200 Sobic008G021200--Sobic005G004100 Sobic002G321400 Sobic002G321400 Sobic008G021200--Sobic002G321400 Sobic007G161200--Sobic004G060100 Sobic007G161200--Sobic003G200800 Sobic007G161200--Sobic005G018800 Sobic007G161200--Sobic009G256000 Sobic004G347600 Sobic004G347600 Sobic007G161200--Sobic004G347600 Sobic007G161200--Sobic008G021200 Sobic001G115700 Sobic001G115700 Sobic007G161200--Sobic001G115700 Sobic007G161200--Sobic008G150300 Sobic007G161200--Sobic004G283600 Sobic003G216500--Sobic002G410700 Sobic004G182500 Sobic004G182500 Sobic003G216500--Sobic004G182500 Sobic003G216500--Sobic009G240700 Sobic003G216500--Sobic001G473400 Sobic003G216500--Sobic003G170300 Sobic002G073800 Sobic002G073800 Sobic003G216500--Sobic002G073800 Sobic003G279200 Sobic003G279200 Sobic003G216500--Sobic003G279200 Sobic003G216500--Sobic006G020900 Sobic001G290700 Sobic001G290700 Sobic003G216500--Sobic001G290700 Sobic001G458800 Sobic001G458800 Sobic002G186300--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic002G186300--Sobic003G034900 Sobic007G119600 Sobic007G119600 Sobic002G186300--Sobic007G119600 Sobic004G297700 Sobic004G297700 Sobic002G186300--Sobic004G297700 Sobic004G244000 Sobic004G244000 Sobic002G186300--Sobic004G244000 Sobic002G186300--Sobic001G115700 Sobic009G224400 Sobic009G224400 Sobic002G186300--Sobic009G224400 Sobic001G457000 Sobic001G457000 Sobic002G186300--Sobic001G457000 Sobic008G057900 Sobic008G057900 Sobic002G186300--Sobic008G057900 Sobic006G020900--Sobic001G473400 Sobic006G020900--Sobic002G410700 Sobic003G388700 Sobic003G388700 Sobic006G020900--Sobic003G388700 Sobic005G105500 Sobic005G105500 Sobic006G020900--Sobic005G105500 Sobic004G291400 Sobic004G291400 Sobic006G020900--Sobic004G291400 Sobic001G304000 Sobic001G304000 Sobic006G020900--Sobic001G304000 Sobic006G020900--Sobic009G256000 Sobic003G392600 Sobic003G392600 Sobic006G020900--Sobic003G392600 Sobic006G020900--Sobic009G240700 Sobic005G018800--Sobic003G200800 Sobic005G018800--Sobic008G021200 Sobic005G018800--Sobic004G060100 Sobic005G018800--Sobic007G161200 Sobic005G018800--Sobic009G256000 Sobic005G018800--Sobic001G115700 Sobic005G018800--Sobic004G283600 Sobic005G018800--Sobic001G304000 Sobic005G018800--Sobic005G004100 Sobic004G106700 Sobic004G106700 Sobic001G110300--Sobic004G106700 Sobic001G451901 Sobic001G451901 Sobic001G110300--Sobic001G451901 Sobic003G305100 Sobic003G305100 Sobic001G110300--Sobic003G305100 Sobic004G184000 Sobic004G184000 Sobic001G110300--Sobic004G184000 Sobic005G110526 Sobic005G110526 Sobic001G110300--Sobic005G110526 Sobic001G129400 Sobic001G129400 Sobic001G110300--Sobic001G129400 Sobic006G231500 Sobic006G231500 Sobic001G110300--Sobic006G231500 Sobic001G110300--Sobic006G237200 Sobic002G260200 Sobic002G260200 Sobic001G110300--Sobic002G260200
Octagon: transcription factors


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