Gene annotation
Transcriptome id Sobic.001G473400.1
Synonym Sb01g044350
Functional annotation NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed
UniProt C5WUR7 , Q09EL2 , H0I4A7
Pfam PF06212
Panther DB PTHR12966 PTHR12966:SF0
NCBI CDD KOG3300; NADH:ubiquinone oxidoreductase, B16.6 subunit/cell death-regulatory protein
KEGG Orthology K11353; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33220 : GRIM-19 protein
RAP-DB (Rice) LOC_Os03g09210.1 : NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed
MaizeGDB (Corn) Zm00025a001256 , Zm00025a053196
Brachypodium KQK23176 , PNT77992 , PNT77990 , PNT77991
Barley HORVU4Hr1G071870.3 , HORVU4Hr1G071870.4 , HORVU4Hr1G071870.2
Wheat TraesCS4B02G267500 , TraesCS4D02G267100 , TraesCS4A02G038200
Populus -


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cDNA sequences
Sobic.001G473400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
2 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
3 Sobic.009G016500 expressed protein -
4 Sobic.009G240700 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
5 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
6 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -
7 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
8 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
9 Sobic.002G308300 expressed protein -
10 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
11 Sobic.002G410700 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
12 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
13 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
14 Sobic.009G001900 expressed protein -
15 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
16 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
17 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
18 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
19 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
20 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8


Gene co-expression network
sample Sobic001G473400 Sobic001G473400 Sobic010G258000 Sobic010G258000 Sobic001G473400--Sobic010G258000 Sobic003G170300 Sobic003G170300 Sobic001G473400--Sobic003G170300 Sobic009G016500 Sobic009G016500 Sobic001G473400--Sobic009G016500 Sobic009G240700 Sobic009G240700 Sobic001G473400--Sobic009G240700 Sobic003G388700 Sobic003G388700 Sobic001G473400--Sobic003G388700 Sobic006G020900 Sobic006G020900 Sobic001G473400--Sobic006G020900 Sobic001G282500 Sobic001G282500 Sobic001G473400--Sobic001G282500 Sobic002G395000 Sobic002G395000 Sobic001G473400--Sobic002G395000 Sobic002G308300 Sobic002G308300 Sobic001G473400--Sobic002G308300 Sobic010G258000--Sobic001G473400 Sobic006G203900 Sobic006G203900 Sobic010G258000--Sobic006G203900 Sobic001G035400 Sobic001G035400 Sobic010G258000--Sobic001G035400 Sobic001G073600 Sobic001G073600 Sobic010G258000--Sobic001G073600 Sobic010G258000--Sobic003G388700 Sobic010G258000--Sobic009G016500 Sobic010G258000--Sobic003G170300 Sobic008G136800 Sobic008G136800 Sobic010G258000--Sobic008G136800 Sobic007G119600 Sobic007G119600 Sobic010G258000--Sobic007G119600 Sobic003G170300--Sobic009G240700 Sobic008G150300 Sobic008G150300 Sobic003G170300--Sobic008G150300 Sobic003G170300--Sobic001G473400 Sobic004G155100 Sobic004G155100 Sobic003G170300--Sobic004G155100 Sobic004G282700 Sobic004G282700 Sobic003G170300--Sobic004G282700 Sobic002G180300 Sobic002G180300 Sobic003G170300--Sobic002G180300 Sobic003G170300--Sobic002G308300 Sobic003G170300--Sobic001G282500 Sobic010G264300 Sobic010G264300 Sobic003G170300--Sobic010G264300 Sobic001G347901 Sobic001G347901 Sobic009G016500--Sobic001G347901 Sobic009G016500--Sobic002G308300 Sobic001G286200 Sobic001G286200 Sobic009G016500--Sobic001G286200 Sobic009G016500--Sobic001G473400 Sobic001G370700 Sobic001G370700 Sobic009G016500--Sobic001G370700 Sobic009G016500--Sobic010G264300 Sobic009G016500--Sobic010G258000 Sobic002G078300 Sobic002G078300 Sobic009G016500--Sobic002G078300 Sobic009G016500--Sobic008G136800 Sobic009G240700--Sobic003G170300 Sobic009G240700--Sobic004G155100 Sobic003G238500 Sobic003G238500 Sobic009G240700--Sobic003G238500 Sobic009G240700--Sobic001G473400 Sobic009G240700--Sobic002G395000 Sobic009G240700--Sobic002G078300 Sobic009G240700--Sobic001G286200 Sobic009G240700--Sobic010G264300 Sobic009G240700--Sobic001G282500 Sobic003G388700--Sobic007G119600 Sobic003G388700--Sobic001G073600 Sobic003G135600 Sobic003G135600 Sobic003G388700--Sobic003G135600 Sobic009G191400 Sobic009G191400 Sobic003G388700--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic003G388700--Sobic002G079700 Sobic003G388700--Sobic001G473400 Sobic010G002800 Sobic010G002800 Sobic003G388700--Sobic010G002800 Sobic003G388700--Sobic010G258000 Sobic006G041800 Sobic006G041800 Sobic003G388700--Sobic006G041800 Sobic006G020900--Sobic001G473400 Sobic002G410700 Sobic002G410700 Sobic006G020900--Sobic002G410700 Sobic006G020900--Sobic003G388700 Sobic005G105500 Sobic005G105500 Sobic006G020900--Sobic005G105500 Sobic004G291400 Sobic004G291400 Sobic006G020900--Sobic004G291400 Sobic001G304000 Sobic001G304000 Sobic006G020900--Sobic001G304000 Sobic009G256000 Sobic009G256000 Sobic006G020900--Sobic009G256000 Sobic003G392600 Sobic003G392600 Sobic006G020900--Sobic003G392600 Sobic006G020900--Sobic009G240700 Sobic002G309700 Sobic002G309700 Sobic001G282500--Sobic002G309700 Sobic009G215300 Sobic009G215300 Sobic001G282500--Sobic009G215300 Sobic004G260200 Sobic004G260200 Sobic001G282500--Sobic004G260200 Sobic002G356400 Sobic002G356400 Sobic001G282500--Sobic002G356400 Sobic001G282500--Sobic002G395000 Sobic001G282500--Sobic002G308300 Sobic001G181500 Sobic001G181500 Sobic001G282500--Sobic001G181500 Sobic001G282500--Sobic003G135600 Sobic001G350600 Sobic001G350600 Sobic001G282500--Sobic001G350600 Sobic002G395000--Sobic004G260200 Sobic002G395000--Sobic003G135600 Sobic009G224400 Sobic009G224400 Sobic002G395000--Sobic009G224400 Sobic002G395000--Sobic003G238500 Sobic002G395000--Sobic002G309700 Sobic002G395000--Sobic001G073600 Sobic002G395000--Sobic004G155100 Sobic007G023400 Sobic007G023400 Sobic002G395000--Sobic007G023400 Sobic002G395000--Sobic002G078300 Sobic002G308300--Sobic001G286200 Sobic002G308300--Sobic010G264300 Sobic002G308300--Sobic001G347901 Sobic002G308300--Sobic009G016500 Sobic002G308300--Sobic002G309700 Sobic002G308300--Sobic001G282500 Sobic002G308300--Sobic001G370700 Sobic002G308300--Sobic002G180300 Sobic002G308300--Sobic002G078300
Octagon: transcription factors


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