Gene annotation
Transcriptome id Sobic.009G001900.1
Synonym Sb09g000380
Functional annotation expressed protein
UniProt C5YXY7
Pfam -
Panther DB PTHR21588
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12340 : copper ion binding
RAP-DB (Rice) LOC_Os05g01300.1 : expressed protein
MaizeGDB (Corn) Zm00025a038296
Brachypodium KQK08139
Barley HORVU1Hr1G000940.2 , HORVU1Hr1G000940.3 , HORVU1Hr1G000940.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G001900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G296200 expressed protein -
2 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
3 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
4 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
5 Sobic.003G322300 expressed protein -
6 Sobic.004G164000 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
7 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
8 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
9 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
10 Sobic.001G286300 - -
11 Sobic.003G129800 keratinocytes-associated protein 2, putative, expressed -
12 Sobic.002G260200 - -
13 Sobic.005G027300 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
14 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
15 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
16 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
17 Sobic.007G177200 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
18 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
19 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
20 Sobic.002G131600 expressed protein -


Gene co-expression network
sample Sobic009G001900 Sobic009G001900 Sobic002G296200 Sobic002G296200 Sobic009G001900--Sobic002G296200 Sobic008G136800 Sobic008G136800 Sobic009G001900--Sobic008G136800 Sobic004G066800 Sobic004G066800 Sobic009G001900--Sobic004G066800 Sobic006G203900 Sobic006G203900 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic004G164000 Sobic004G164000 Sobic009G001900--Sobic004G164000 Sobic006G231500 Sobic006G231500 Sobic009G001900--Sobic006G231500 Sobic004G260200 Sobic004G260200 Sobic009G001900--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic009G001900--Sobic002G309700 Sobic006G013000 Sobic006G013000 Sobic002G296200--Sobic006G013000 Sobic007G134900 Sobic007G134900 Sobic002G296200--Sobic007G134900 Sobic001G074700 Sobic001G074700 Sobic002G296200--Sobic001G074700 Sobic003G215700 Sobic003G215700 Sobic002G296200--Sobic003G215700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic001G047800 Sobic001G047800 Sobic002G296200--Sobic001G047800 Sobic001G286200 Sobic001G286200 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic008G136800--Sobic006G203900 Sobic008G136800--Sobic009G001900 Sobic009G211900 Sobic009G211900 Sobic008G136800--Sobic009G211900 Sobic007G013900 Sobic007G013900 Sobic008G136800--Sobic007G013900 Sobic001G031800 Sobic001G031800 Sobic008G136800--Sobic001G031800 Sobic006G124300 Sobic006G124300 Sobic008G136800--Sobic006G124300 Sobic007G141100 Sobic007G141100 Sobic008G136800--Sobic007G141100 Sobic008G136800--Sobic002G296200 Sobic003G074900 Sobic003G074900 Sobic008G136800--Sobic003G074900 Sobic004G066800--Sobic003G129800 Sobic004G310300 Sobic004G310300 Sobic004G066800--Sobic004G310300 Sobic001G483100 Sobic001G483100 Sobic004G066800--Sobic001G483100 Sobic007G092100 Sobic007G092100 Sobic004G066800--Sobic007G092100 Sobic010G154700 Sobic010G154700 Sobic004G066800--Sobic010G154700 Sobic005G111100 Sobic005G111100 Sobic004G066800--Sobic005G111100 Sobic001G513500 Sobic001G513500 Sobic004G066800--Sobic001G513500 Sobic003G155400 Sobic003G155400 Sobic004G066800--Sobic003G155400 Sobic009G191200 Sobic009G191200 Sobic004G066800--Sobic009G191200 Sobic006G203900--Sobic008G136800 Sobic006G203900--Sobic009G211900 Sobic001G035400 Sobic001G035400 Sobic006G203900--Sobic001G035400 Sobic001G073600 Sobic001G073600 Sobic006G203900--Sobic001G073600 Sobic004G138300 Sobic004G138300 Sobic006G203900--Sobic004G138300 Sobic006G203900--Sobic006G124300 Sobic003G135600 Sobic003G135600 Sobic006G203900--Sobic003G135600 Sobic006G203900--Sobic009G001900 Sobic006G203900--Sobic007G013900 Sobic003G238500 Sobic003G238500 Sobic003G322300--Sobic003G238500 Sobic003G322300--Sobic001G286200 Sobic003G322300--Sobic009G001900 Sobic002G395000 Sobic002G395000 Sobic003G322300--Sobic002G395000 Sobic003G322300--Sobic006G203900 Sobic002G078300 Sobic002G078300 Sobic003G322300--Sobic002G078300 Sobic003G322300--Sobic002G296200 Sobic002G180300 Sobic002G180300 Sobic003G322300--Sobic002G180300 Sobic002G356400 Sobic002G356400 Sobic003G322300--Sobic002G356400 Sobic003G131300 Sobic003G131300 Sobic004G164000--Sobic003G131300 Sobic007G019501 Sobic007G019501 Sobic004G164000--Sobic007G019501 Sobic004G164000--Sobic009G001900 Sobic004G159000 Sobic004G159000 Sobic004G164000--Sobic004G159000 Sobic002G090700 Sobic002G090700 Sobic004G164000--Sobic002G090700 Sobic001G392800 Sobic001G392800 Sobic004G164000--Sobic001G392800 Sobic001G309500 Sobic001G309500 Sobic004G164000--Sobic001G309500 Sobic004G164000--Sobic008G136800 Sobic008G025700 Sobic008G025700 Sobic004G164000--Sobic008G025700 Sobic003G305100 Sobic003G305100 Sobic006G231500--Sobic003G305100 Sobic009G212300 Sobic009G212300 Sobic006G231500--Sobic009G212300 Sobic006G231500--Sobic009G001900 Sobic004G202100 Sobic004G202100 Sobic006G231500--Sobic004G202100 Sobic004G012800 Sobic004G012800 Sobic006G231500--Sobic004G012800 Sobic006G109700 Sobic006G109700 Sobic006G231500--Sobic006G109700 Sobic007G091000 Sobic007G091000 Sobic006G231500--Sobic007G091000 Sobic006G231500--Sobic002G296200 Sobic001G286300 Sobic001G286300 Sobic006G231500--Sobic001G286300 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic001G465800 Sobic001G465800 Sobic004G260200--Sobic001G465800 Sobic004G260200--Sobic002G395000 Sobic004G260200--Sobic002G356400 Sobic001G404800 Sobic001G404800 Sobic004G260200--Sobic001G404800 Sobic009G215300 Sobic009G215300 Sobic004G260200--Sobic009G215300 Sobic002G263100 Sobic002G263100 Sobic004G260200--Sobic002G263100 Sobic004G260200--Sobic001G074700 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G309700--Sobic002G356400 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic002G309700--Sobic001G074700 Sobic002G309700--Sobic002G296200 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700
Octagon: transcription factors


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