Gene annotation
Transcriptome id Sobic.002G131600.1
Synonym Sb02g011320
Functional annotation expressed protein
UniProt C5X5U2
Pfam PF08213
Panther DB PTHR32035
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g46730.2 : expressed protein
MaizeGDB (Corn) Zm00025a045913
Brachypodium KQJ91526
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
2 Sobic.002G296200 expressed protein -
3 Sobic.008G021100 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
4 Sobic.009G115700 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
5 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
6 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
7 Sobic.004G294900 expressed protein -
8 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
9 Sobic.007G134900 expressed protein -
10 Sobic.009G001900 expressed protein -
11 Sobic.003G238500 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
12 Sobic.002G415500 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
13 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
14 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
15 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
16 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
17 Sobic.003G322300 expressed protein -
18 Sobic.001G058900 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
19 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
20 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta


Gene co-expression network
sample Sobic002G131600 Sobic002G131600 Sobic003G261100 Sobic003G261100 Sobic002G131600--Sobic003G261100 Sobic002G296200 Sobic002G296200 Sobic002G131600--Sobic002G296200 Sobic008G021100 Sobic008G021100 Sobic002G131600--Sobic008G021100 Sobic009G115700 Sobic009G115700 Sobic002G131600--Sobic009G115700 Sobic002G078300 Sobic002G078300 Sobic002G131600--Sobic002G078300 Sobic001G286200 Sobic001G286200 Sobic002G131600--Sobic001G286200 Sobic004G294900 Sobic004G294900 Sobic002G131600--Sobic004G294900 Sobic004G262300 Sobic004G262300 Sobic002G131600--Sobic004G262300 Sobic007G134900 Sobic007G134900 Sobic002G131600--Sobic007G134900 Sobic001G370700 Sobic001G370700 Sobic003G261100--Sobic001G370700 Sobic003G261100--Sobic002G131600 Sobic001G057300 Sobic001G057300 Sobic003G261100--Sobic001G057300 Sobic006G035900 Sobic006G035900 Sobic003G261100--Sobic006G035900 Sobic003G261100--Sobic009G115700 Sobic007G191600 Sobic007G191600 Sobic003G261100--Sobic007G191600 Sobic004G155100 Sobic004G155100 Sobic003G261100--Sobic004G155100 Sobic001G214900 Sobic001G214900 Sobic003G261100--Sobic001G214900 Sobic001G501600 Sobic001G501600 Sobic003G261100--Sobic001G501600 Sobic006G013000 Sobic006G013000 Sobic002G296200--Sobic006G013000 Sobic002G296200--Sobic007G134900 Sobic001G074700 Sobic001G074700 Sobic002G296200--Sobic001G074700 Sobic003G215700 Sobic003G215700 Sobic002G296200--Sobic003G215700 Sobic002G309700 Sobic002G309700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic001G047800 Sobic001G047800 Sobic002G296200--Sobic001G047800 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic001G058900 Sobic001G058900 Sobic008G021100--Sobic001G058900 Sobic002G115000 Sobic002G115000 Sobic008G021100--Sobic002G115000 Sobic006G221200 Sobic006G221200 Sobic008G021100--Sobic006G221200 Sobic002G049300 Sobic002G049300 Sobic008G021100--Sobic002G049300 Sobic008G135000 Sobic008G135000 Sobic008G021100--Sobic008G135000 Sobic009G233400 Sobic009G233400 Sobic008G021100--Sobic009G233400 Sobic001G085400 Sobic001G085400 Sobic008G021100--Sobic001G085400 Sobic001G510800 Sobic001G510800 Sobic008G021100--Sobic001G510800 Sobic001G334300 Sobic001G334300 Sobic008G021100--Sobic001G334300 Sobic002G415500 Sobic002G415500 Sobic009G115700--Sobic002G415500 Sobic009G115700--Sobic009G233400 Sobic009G115700--Sobic001G334300 Sobic002G304900 Sobic002G304900 Sobic009G115700--Sobic002G304900 Sobic005G050500 Sobic005G050500 Sobic009G115700--Sobic005G050500 Sobic009G115700--Sobic007G134900 Sobic002G135200 Sobic002G135200 Sobic009G115700--Sobic002G135200 Sobic009G115700--Sobic001G058900 Sobic009G191200 Sobic009G191200 Sobic009G115700--Sobic009G191200 Sobic002G078300--Sobic001G286200 Sobic010G264300 Sobic010G264300 Sobic002G078300--Sobic010G264300 Sobic004G260200 Sobic004G260200 Sobic002G078300--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic002G078300--Sobic002G395000 Sobic002G078300--Sobic002G309700 Sobic007G211500 Sobic007G211500 Sobic002G078300--Sobic007G211500 Sobic002G356400 Sobic002G356400 Sobic002G078300--Sobic002G356400 Sobic002G078300--Sobic001G370700 Sobic002G308300 Sobic002G308300 Sobic002G078300--Sobic002G308300 Sobic001G286200--Sobic002G078300 Sobic001G286200--Sobic010G264300 Sobic001G304400 Sobic001G304400 Sobic001G286200--Sobic001G304400 Sobic001G286200--Sobic007G211500 Sobic001G286200--Sobic002G296200 Sobic001G286200--Sobic007G134900 Sobic009G212200 Sobic009G212200 Sobic001G286200--Sobic009G212200 Sobic001G286200--Sobic002G308300 Sobic002G263100 Sobic002G263100 Sobic001G286200--Sobic002G263100 Sobic003G238500 Sobic003G238500 Sobic004G294900--Sobic003G238500 Sobic004G294900--Sobic002G131600 Sobic009G001900 Sobic009G001900 Sobic004G294900--Sobic009G001900 Sobic004G294900--Sobic002G395000 Sobic004G294900--Sobic001G370700 Sobic006G124300 Sobic006G124300 Sobic004G294900--Sobic006G124300 Sobic004G294900--Sobic002G078300 Sobic003G322300 Sobic003G322300 Sobic004G294900--Sobic003G322300 Sobic004G294900--Sobic004G260200 Sobic004G202100 Sobic004G202100 Sobic004G262300--Sobic004G202100 Sobic001G060300 Sobic001G060300 Sobic004G262300--Sobic001G060300 Sobic001G342200 Sobic001G342200 Sobic004G262300--Sobic001G342200 Sobic001G031900 Sobic001G031900 Sobic004G262300--Sobic001G031900 Sobic010G038700 Sobic010G038700 Sobic004G262300--Sobic010G038700 Sobic004G262300--Sobic009G001900 Sobic004G066800 Sobic004G066800 Sobic004G262300--Sobic004G066800 Sobic004G262300--Sobic002G131600 Sobic007G092100 Sobic007G092100 Sobic004G262300--Sobic007G092100 Sobic007G134900--Sobic002G296200 Sobic007G134900--Sobic002G263100 Sobic001G519000 Sobic001G519000 Sobic007G134900--Sobic001G519000 Sobic007G134900--Sobic001G047800 Sobic007G134900--Sobic003G215700 Sobic009G223300 Sobic009G223300 Sobic007G134900--Sobic009G223300 Sobic007G134900--Sobic001G286200 Sobic007G134900--Sobic002G309700 Sobic009G173500 Sobic009G173500 Sobic007G134900--Sobic009G173500
Octagon: transcription factors


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