Gene annotation
Transcriptome id Sobic.004G294900.8,Sobic.004G294900.2,Sobic.004G294900.1,Sobic.004G294900.6,Sobic.004G294900.4,Sobic.004G294900.5,Sobic.004G294900.3,Sobic.004G294900.7
Synonym Sb04g032880
Functional annotation expressed protein
UniProt A0A1Z5RQI2 , A0A1Z5RQ68 , C5XRX7 , A0A1Z5RPT4
Pfam -
Panther DB PTHR33156 PTHR33156:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17310 : -
RAP-DB (Rice) LOC_Os02g44100.3,LOC_Os02g44100.1,LOC_Os02g44100.2 : expressed protein
MaizeGDB (Corn) Zm00025a032210 , Zm00025a020877
Brachypodium KQK00618
Barley -
Wheat TraesCS6A02G250000 , TraesCS6B02G275400 , TraesCS6D02G231800 , TraesCS6D02G231800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G238500 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
2 Sobic.002G131600 expressed protein -
3 Sobic.009G001900 expressed protein -
4 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
5 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
6 Sobic.006G124300 metalloprotease ATP23, putative, expressed K18156: ATP23, mitochondrial inner membrane protease ATP23
7 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
8 Sobic.003G322300 expressed protein -
9 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
10 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
11 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
12 Sobic.009G179100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
13 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
14 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
15 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
16 Sobic.009G054000 expressed protein -
17 Sobic.002G304900 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
18 Sobic.001G513500 ribosomal protein L7Ae, putative, expressed K12845: SNU13, U4/U6 small nuclear ribonucleoprotein SNU13
19 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
20 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta


Gene co-expression network
sample Sobic004G294900 Sobic004G294900 Sobic003G238500 Sobic003G238500 Sobic004G294900--Sobic003G238500 Sobic002G131600 Sobic002G131600 Sobic004G294900--Sobic002G131600 Sobic009G001900 Sobic009G001900 Sobic004G294900--Sobic009G001900 Sobic002G395000 Sobic002G395000 Sobic004G294900--Sobic002G395000 Sobic001G370700 Sobic001G370700 Sobic004G294900--Sobic001G370700 Sobic006G124300 Sobic006G124300 Sobic004G294900--Sobic006G124300 Sobic002G078300 Sobic002G078300 Sobic004G294900--Sobic002G078300 Sobic003G322300 Sobic003G322300 Sobic004G294900--Sobic003G322300 Sobic004G260200 Sobic004G260200 Sobic004G294900--Sobic004G260200 Sobic003G238500--Sobic002G395000 Sobic003G238500--Sobic003G322300 Sobic003G238500--Sobic004G260200 Sobic003G238500--Sobic004G294900 Sobic004G155100 Sobic004G155100 Sobic003G238500--Sobic004G155100 Sobic009G240700 Sobic009G240700 Sobic003G238500--Sobic009G240700 Sobic006G203900 Sobic006G203900 Sobic003G238500--Sobic006G203900 Sobic008G084100 Sobic008G084100 Sobic003G238500--Sobic008G084100 Sobic001G073600 Sobic001G073600 Sobic003G238500--Sobic001G073600 Sobic003G261100 Sobic003G261100 Sobic002G131600--Sobic003G261100 Sobic002G296200 Sobic002G296200 Sobic002G131600--Sobic002G296200 Sobic008G021100 Sobic008G021100 Sobic002G131600--Sobic008G021100 Sobic009G115700 Sobic009G115700 Sobic002G131600--Sobic009G115700 Sobic002G131600--Sobic002G078300 Sobic001G286200 Sobic001G286200 Sobic002G131600--Sobic001G286200 Sobic002G131600--Sobic004G294900 Sobic004G262300 Sobic004G262300 Sobic002G131600--Sobic004G262300 Sobic007G134900 Sobic007G134900 Sobic002G131600--Sobic007G134900 Sobic009G001900--Sobic002G296200 Sobic008G136800 Sobic008G136800 Sobic009G001900--Sobic008G136800 Sobic004G066800 Sobic004G066800 Sobic009G001900--Sobic004G066800 Sobic009G001900--Sobic006G203900 Sobic009G001900--Sobic003G322300 Sobic004G164000 Sobic004G164000 Sobic009G001900--Sobic004G164000 Sobic006G231500 Sobic006G231500 Sobic009G001900--Sobic006G231500 Sobic009G001900--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic009G001900--Sobic002G309700 Sobic002G395000--Sobic004G260200 Sobic003G135600 Sobic003G135600 Sobic002G395000--Sobic003G135600 Sobic009G224400 Sobic009G224400 Sobic002G395000--Sobic009G224400 Sobic002G395000--Sobic003G238500 Sobic002G395000--Sobic002G309700 Sobic002G395000--Sobic001G073600 Sobic002G395000--Sobic004G155100 Sobic007G023400 Sobic007G023400 Sobic002G395000--Sobic007G023400 Sobic002G395000--Sobic002G078300 Sobic010G264300 Sobic010G264300 Sobic001G370700--Sobic010G264300 Sobic001G370700--Sobic002G309700 Sobic002G308300 Sobic002G308300 Sobic001G370700--Sobic002G308300 Sobic002G180300 Sobic002G180300 Sobic001G370700--Sobic002G180300 Sobic001G370700--Sobic002G078300 Sobic001G347901 Sobic001G347901 Sobic001G370700--Sobic001G347901 Sobic001G370700--Sobic003G261100 Sobic009G179100 Sobic009G179100 Sobic001G370700--Sobic009G179100 Sobic001G370700--Sobic004G260200 Sobic009G211900 Sobic009G211900 Sobic006G124300--Sobic009G211900 Sobic006G124300--Sobic006G203900 Sobic006G124300--Sobic008G136800 Sobic006G124300--Sobic004G260200 Sobic005G091700 Sobic005G091700 Sobic006G124300--Sobic005G091700 Sobic001G030300 Sobic001G030300 Sobic006G124300--Sobic001G030300 Sobic006G124300--Sobic003G135600 Sobic003G074900 Sobic003G074900 Sobic006G124300--Sobic003G074900 Sobic001G350600 Sobic001G350600 Sobic006G124300--Sobic001G350600 Sobic002G078300--Sobic001G286200 Sobic002G078300--Sobic010G264300 Sobic002G078300--Sobic004G260200 Sobic002G078300--Sobic002G395000 Sobic002G078300--Sobic002G309700 Sobic007G211500 Sobic007G211500 Sobic002G078300--Sobic007G211500 Sobic002G356400 Sobic002G356400 Sobic002G078300--Sobic002G356400 Sobic002G078300--Sobic001G370700 Sobic002G078300--Sobic002G308300 Sobic003G322300--Sobic003G238500 Sobic003G322300--Sobic001G286200 Sobic003G322300--Sobic009G001900 Sobic003G322300--Sobic002G395000 Sobic003G322300--Sobic006G203900 Sobic003G322300--Sobic002G078300 Sobic003G322300--Sobic002G296200 Sobic003G322300--Sobic002G180300 Sobic003G322300--Sobic002G356400 Sobic004G260200--Sobic002G309700 Sobic001G047800 Sobic001G047800 Sobic004G260200--Sobic001G047800 Sobic001G465800 Sobic001G465800 Sobic004G260200--Sobic001G465800 Sobic004G260200--Sobic002G395000 Sobic004G260200--Sobic002G356400 Sobic001G404800 Sobic001G404800 Sobic004G260200--Sobic001G404800 Sobic009G215300 Sobic009G215300 Sobic004G260200--Sobic009G215300 Sobic002G263100 Sobic002G263100 Sobic004G260200--Sobic002G263100 Sobic001G074700 Sobic001G074700 Sobic004G260200--Sobic001G074700
Octagon: transcription factors


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