Gene annotation
Transcriptome id Sobic.001G342200.1
Synonym rps15ae, Sb01g032870
Functional annotation 40S ribosomal protein S15a, putative, expressed
UniProt A0A1B6QMM8
Pfam PF00410
Panther DB PTHR11758 PTHR11758:SF11
NCBI CDD KOG1754; 40S ribosomal protein S15/S22
KEGG Orthology K02957; RP-S15Ae, small subunit ribosomal protein S15Ae
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT4G29430 : ribosomal protein S15A E
RAP-DB (Rice) LOC_Os02g15610.1 : 40S ribosomal protein S15a, putative, expressed
MaizeGDB (Corn) Zm00025a052163
Brachypodium PNT70230 , PNT74511 , PNT74510 , PNT74508 , PNT74509
Barley HORVU3Hr1G032340.2 , HORVU3Hr1G032340.1
Wheat TraesCS3D02G167500 , TraesCS3A02G160300 , TraesCS3B02G190900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
2 Sobic.001G060300 expressed protein -
3 Sobic.007G177200 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
4 Sobic.007G115100 hydrolase, NUDIX family, domain containing protein, expressed -
5 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
6 Sobic.010G008800 defender against cell death 1, putative, expressed K12668: OST2, oligosaccharyltransferase complex subunit epsilon
7 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
8 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
9 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
10 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
11 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
12 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
13 Sobic.007G019100 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
14 Sobic.005G027300 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
15 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
16 Sobic.009G012800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
17 Sobic.002G135200 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
18 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
19 Sobic.001G513500 ribosomal protein L7Ae, putative, expressed K12845: SNU13, U4/U6 small nuclear ribonucleoprotein SNU13
20 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1


Gene co-expression network
sample Sobic001G342200 Sobic001G342200 Sobic001G057300 Sobic001G057300 Sobic001G342200--Sobic001G057300 Sobic001G060300 Sobic001G060300 Sobic001G342200--Sobic001G060300 Sobic007G177200 Sobic007G177200 Sobic001G342200--Sobic007G177200 Sobic007G115100 Sobic007G115100 Sobic001G342200--Sobic007G115100 Sobic007G092100 Sobic007G092100 Sobic001G342200--Sobic007G092100 Sobic010G008800 Sobic010G008800 Sobic001G342200--Sobic010G008800 Sobic004G170400 Sobic004G170400 Sobic001G342200--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic001G342200--Sobic001G074700 Sobic001G031900 Sobic001G031900 Sobic001G342200--Sobic001G031900 Sobic006G216600 Sobic006G216600 Sobic001G057300--Sobic006G216600 Sobic002G304900 Sobic002G304900 Sobic001G057300--Sobic002G304900 Sobic008G135000 Sobic008G135000 Sobic001G057300--Sobic008G135000 Sobic001G058900 Sobic001G058900 Sobic001G057300--Sobic001G058900 Sobic001G334300 Sobic001G334300 Sobic001G057300--Sobic001G334300 Sobic001G085400 Sobic001G085400 Sobic001G057300--Sobic001G085400 Sobic006G035900 Sobic006G035900 Sobic001G057300--Sobic006G035900 Sobic002G115000 Sobic002G115000 Sobic001G057300--Sobic002G115000 Sobic003G387900 Sobic003G387900 Sobic001G057300--Sobic003G387900 Sobic001G060300--Sobic001G342200 Sobic001G178500 Sobic001G178500 Sobic001G060300--Sobic001G178500 Sobic001G214900 Sobic001G214900 Sobic001G060300--Sobic001G214900 Sobic004G262300 Sobic004G262300 Sobic001G060300--Sobic004G262300 Sobic009G112900 Sobic009G112900 Sobic001G060300--Sobic009G112900 Sobic002G402500 Sobic002G402500 Sobic001G060300--Sobic002G402500 Sobic008G136800 Sobic008G136800 Sobic001G060300--Sobic008G136800 Sobic010G194200 Sobic010G194200 Sobic001G060300--Sobic010G194200 Sobic009G012800 Sobic009G012800 Sobic001G060300--Sobic009G012800 Sobic002G296200 Sobic002G296200 Sobic007G177200--Sobic002G296200 Sobic008G127500 Sobic008G127500 Sobic007G177200--Sobic008G127500 Sobic003G215700 Sobic003G215700 Sobic007G177200--Sobic003G215700 Sobic007G177200--Sobic001G342200 Sobic003G129800 Sobic003G129800 Sobic007G177200--Sobic003G129800 Sobic007G177200--Sobic001G058900 Sobic004G066800 Sobic004G066800 Sobic007G177200--Sobic004G066800 Sobic007G177200--Sobic001G057300 Sobic001G286200 Sobic001G286200 Sobic007G177200--Sobic001G286200 Sobic001G418900 Sobic001G418900 Sobic007G115100--Sobic001G418900 Sobic004G269700 Sobic004G269700 Sobic007G115100--Sobic004G269700 Sobic003G155400 Sobic003G155400 Sobic007G115100--Sobic003G155400 Sobic001G505500 Sobic001G505500 Sobic007G115100--Sobic001G505500 Sobic010G153100 Sobic010G153100 Sobic007G115100--Sobic010G153100 Sobic007G115100--Sobic001G342200 Sobic010G023800 Sobic010G023800 Sobic007G115100--Sobic010G023800 Sobic010G154700 Sobic010G154700 Sobic007G115100--Sobic010G154700 Sobic004G138800 Sobic004G138800 Sobic007G115100--Sobic004G138800 Sobic007G092100--Sobic004G066800 Sobic007G092100--Sobic001G057300 Sobic007G092100--Sobic001G505500 Sobic001G035400 Sobic001G035400 Sobic007G092100--Sobic001G035400 Sobic007G092100--Sobic001G342200 Sobic003G330500 Sobic003G330500 Sobic007G092100--Sobic003G330500 Sobic001G096100 Sobic001G096100 Sobic007G092100--Sobic001G096100 Sobic007G092100--Sobic004G138800 Sobic009G191200 Sobic009G191200 Sobic007G092100--Sobic009G191200 Sobic010G008800--Sobic001G074700 Sobic010G008800--Sobic001G342200 Sobic001G350600 Sobic001G350600 Sobic010G008800--Sobic001G350600 Sobic006G013000 Sobic006G013000 Sobic010G008800--Sobic006G013000 Sobic010G008800--Sobic004G066800 Sobic004G310300 Sobic004G310300 Sobic010G008800--Sobic004G310300 Sobic009G115700 Sobic009G115700 Sobic010G008800--Sobic009G115700 Sobic010G008800--Sobic003G129800 Sobic010G008800--Sobic001G505500 Sobic004G170400--Sobic001G350600 Sobic004G259200 Sobic004G259200 Sobic004G170400--Sobic004G259200 Sobic004G170400--Sobic001G074700 Sobic001G465800 Sobic001G465800 Sobic004G170400--Sobic001G465800 Sobic009G119900 Sobic009G119900 Sobic004G170400--Sobic009G119900 Sobic002G356400 Sobic002G356400 Sobic004G170400--Sobic002G356400 Sobic003G209000 Sobic003G209000 Sobic004G170400--Sobic003G209000 Sobic004G170400--Sobic004G310300 Sobic002G418400 Sobic002G418400 Sobic004G170400--Sobic002G418400 Sobic001G074700--Sobic004G170400 Sobic001G074700--Sobic001G350600 Sobic001G074700--Sobic004G259200 Sobic002G309700 Sobic002G309700 Sobic001G074700--Sobic002G309700 Sobic001G074700--Sobic010G154700 Sobic001G074700--Sobic002G296200 Sobic001G074700--Sobic009G119900 Sobic001G047800 Sobic001G047800 Sobic001G074700--Sobic001G047800 Sobic001G074700--Sobic002G418400 Sobic006G058900 Sobic006G058900 Sobic001G031900--Sobic006G058900 Sobic004G202100 Sobic004G202100 Sobic001G031900--Sobic004G202100 Sobic002G395000 Sobic002G395000 Sobic001G031900--Sobic002G395000 Sobic001G031900--Sobic001G350600 Sobic004G344800 Sobic004G344800 Sobic001G031900--Sobic004G344800 Sobic003G152900 Sobic003G152900 Sobic001G031900--Sobic003G152900 Sobic001G031900--Sobic004G170400 Sobic001G458800 Sobic001G458800 Sobic001G031900--Sobic001G458800 Sobic004G030000 Sobic004G030000 Sobic001G031900--Sobic004G030000
Octagon: transcription factors


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