Gene annotation
Transcriptome id Sobic.009G012800.1
Synonym TIM9, Sb09g001280, emb2474
Functional annotation mitochondrial import inner membrane translocase subunit Tim, putative, expressed
UniProt B3VTC6 , C5YYI2
Pfam PF02953
Panther DB PTHR10898 PTHR10898:SF11
NCBI CDD -
KEGG Orthology K17777; mitochondrial import inner membrane translocase subunit TIM9
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46560 : Tim10/DDP family zinc finger protein
RAP-DB (Rice) LOC_Os05g02050.1 : mitochondrial import inner membrane translocase subunit Tim, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
2 Sobic.001G060300 expressed protein -
3 Sobic.010G008800 defender against cell death 1, putative, expressed K12668: OST2, oligosaccharyltransferase complex subunit epsilon
4 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
5 Sobic.001G214900 expressed protein -
6 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
7 Sobic.001G030300 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17778: mitochondrial import inner membrane translocase subunit TIM10
8 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
9 Sobic.003G237400 plastidic ATP/ADP-transporter, putative, expressed K03301: ATP:ADP antiporter, AAA family
10 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
11 Sobic.006G017100 ribosomal L18p/L5e family protein, putative, expressed -
12 Sobic.007G191600 exosome complex exonuclease, putative, expressed K12586: RRP43, EXOSC8, exosome complex component RRP43
13 Sobic.005G027300 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
14 Sobic.001G178500 chloroplast 30S ribosomal protein S19, putative, expressed K02965: RP-S19, small subunit ribosomal protein S19
15 Sobic.002G131600 expressed protein -
16 Sobic.005G191600 OsSigP7 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K09647: mitochondrial inner membrane protease subunit 1
17 Sobic.004G248900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
18 Sobic.006G035900 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
19 Sobic.003G160900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
20 Sobic.004G056400 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase


Gene co-expression network
sample Sobic009G012800 Sobic009G012800 Sobic001G342200 Sobic001G342200 Sobic009G012800--Sobic001G342200 Sobic001G060300 Sobic001G060300 Sobic009G012800--Sobic001G060300 Sobic010G008800 Sobic010G008800 Sobic009G012800--Sobic010G008800 Sobic004G262300 Sobic004G262300 Sobic009G012800--Sobic004G262300 Sobic001G214900 Sobic001G214900 Sobic009G012800--Sobic001G214900 Sobic003G261100 Sobic003G261100 Sobic009G012800--Sobic003G261100 Sobic001G030300 Sobic001G030300 Sobic009G012800--Sobic001G030300 Sobic001G057300 Sobic001G057300 Sobic009G012800--Sobic001G057300 Sobic003G237400 Sobic003G237400 Sobic009G012800--Sobic003G237400 Sobic001G342200--Sobic001G057300 Sobic001G342200--Sobic001G060300 Sobic007G177200 Sobic007G177200 Sobic001G342200--Sobic007G177200 Sobic007G115100 Sobic007G115100 Sobic001G342200--Sobic007G115100 Sobic007G092100 Sobic007G092100 Sobic001G342200--Sobic007G092100 Sobic001G342200--Sobic010G008800 Sobic004G170400 Sobic004G170400 Sobic001G342200--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic001G342200--Sobic001G074700 Sobic001G031900 Sobic001G031900 Sobic001G342200--Sobic001G031900 Sobic001G060300--Sobic001G342200 Sobic001G178500 Sobic001G178500 Sobic001G060300--Sobic001G178500 Sobic001G060300--Sobic001G214900 Sobic001G060300--Sobic004G262300 Sobic009G112900 Sobic009G112900 Sobic001G060300--Sobic009G112900 Sobic002G402500 Sobic002G402500 Sobic001G060300--Sobic002G402500 Sobic008G136800 Sobic008G136800 Sobic001G060300--Sobic008G136800 Sobic010G194200 Sobic010G194200 Sobic001G060300--Sobic010G194200 Sobic001G060300--Sobic009G012800 Sobic010G008800--Sobic001G074700 Sobic010G008800--Sobic001G342200 Sobic001G350600 Sobic001G350600 Sobic010G008800--Sobic001G350600 Sobic006G013000 Sobic006G013000 Sobic010G008800--Sobic006G013000 Sobic004G066800 Sobic004G066800 Sobic010G008800--Sobic004G066800 Sobic004G310300 Sobic004G310300 Sobic010G008800--Sobic004G310300 Sobic009G115700 Sobic009G115700 Sobic010G008800--Sobic009G115700 Sobic003G129800 Sobic003G129800 Sobic010G008800--Sobic003G129800 Sobic001G505500 Sobic001G505500 Sobic010G008800--Sobic001G505500 Sobic004G202100 Sobic004G202100 Sobic004G262300--Sobic004G202100 Sobic004G262300--Sobic001G060300 Sobic004G262300--Sobic001G342200 Sobic004G262300--Sobic001G031900 Sobic010G038700 Sobic010G038700 Sobic004G262300--Sobic010G038700 Sobic009G001900 Sobic009G001900 Sobic004G262300--Sobic009G001900 Sobic004G262300--Sobic004G066800 Sobic002G131600 Sobic002G131600 Sobic004G262300--Sobic002G131600 Sobic004G262300--Sobic007G092100 Sobic001G214900--Sobic001G060300 Sobic002G367800 Sobic002G367800 Sobic001G214900--Sobic002G367800 Sobic001G214900--Sobic003G261100 Sobic003G205400 Sobic003G205400 Sobic001G214900--Sobic003G205400 Sobic010G134100 Sobic010G134100 Sobic001G214900--Sobic010G134100 Sobic010G277000 Sobic010G277000 Sobic001G214900--Sobic010G277000 Sobic007G143000 Sobic007G143000 Sobic001G214900--Sobic007G143000 Sobic001G214900--Sobic002G402500 Sobic001G530800 Sobic001G530800 Sobic001G214900--Sobic001G530800 Sobic001G370700 Sobic001G370700 Sobic003G261100--Sobic001G370700 Sobic003G261100--Sobic002G131600 Sobic003G261100--Sobic001G057300 Sobic006G035900 Sobic006G035900 Sobic003G261100--Sobic006G035900 Sobic003G261100--Sobic009G115700 Sobic007G191600 Sobic007G191600 Sobic003G261100--Sobic007G191600 Sobic004G155100 Sobic004G155100 Sobic003G261100--Sobic004G155100 Sobic003G261100--Sobic001G214900 Sobic001G501600 Sobic001G501600 Sobic003G261100--Sobic001G501600 Sobic002G135200 Sobic002G135200 Sobic001G030300--Sobic002G135200 Sobic009G179100 Sobic009G179100 Sobic001G030300--Sobic009G179100 Sobic006G261900 Sobic006G261900 Sobic001G030300--Sobic006G261900 Sobic001G513500 Sobic001G513500 Sobic001G030300--Sobic001G513500 Sobic010G023900 Sobic010G023900 Sobic001G030300--Sobic010G023900 Sobic009G101700 Sobic009G101700 Sobic001G030300--Sobic009G101700 Sobic009G119900 Sobic009G119900 Sobic001G030300--Sobic009G119900 Sobic002G356400 Sobic002G356400 Sobic001G030300--Sobic002G356400 Sobic002G296200 Sobic002G296200 Sobic001G030300--Sobic002G296200 Sobic006G216600 Sobic006G216600 Sobic001G057300--Sobic006G216600 Sobic002G304900 Sobic002G304900 Sobic001G057300--Sobic002G304900 Sobic008G135000 Sobic008G135000 Sobic001G057300--Sobic008G135000 Sobic001G058900 Sobic001G058900 Sobic001G057300--Sobic001G058900 Sobic001G334300 Sobic001G334300 Sobic001G057300--Sobic001G334300 Sobic001G085400 Sobic001G085400 Sobic001G057300--Sobic001G085400 Sobic001G057300--Sobic006G035900 Sobic002G115000 Sobic002G115000 Sobic001G057300--Sobic002G115000 Sobic003G387900 Sobic003G387900 Sobic001G057300--Sobic003G387900 Sobic003G237400--Sobic001G031900 Sobic004G159000 Sobic004G159000 Sobic003G237400--Sobic004G159000 Sobic003G237400--Sobic007G191600 Sobic003G237400--Sobic001G342200 Sobic009G224400 Sobic009G224400 Sobic003G237400--Sobic009G224400 Sobic003G237400--Sobic009G112900 Sobic003G237400--Sobic003G261100 Sobic004G344800 Sobic004G344800 Sobic003G237400--Sobic004G344800 Sobic007G013900 Sobic007G013900 Sobic003G237400--Sobic007G013900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.