Gene annotation
Transcriptome id Sobic.003G237400.1
Synonym ATNTT2, Sb03g029490
Functional annotation plastidic ATP/ADP-transporter, putative, expressed
UniProt C5XF62
Pfam PF03219
Panther DB PTHR31187 PTHR31187:SF3
NCBI CDD -
KEGG Orthology K03301; ATP:ADP antiporter, AAA family
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport GO:0005524ATP binding GO:0005471ATP:ADP antiporter activity


Orthologs (automatic annotation)
TAIR AT1G80300 : nucleotide transporter 1
RAP-DB (Rice) LOC_Os01g45910.1 : plastidic ATP/ADP-transporter, putative, expressed
MaizeGDB (Corn) Zm00025a020233 , Zm00025a028252 , Zm00025a038681
Brachypodium KQJ93974 , KQK08965
Barley HORVU3Hr1G058170.4 , HORVU6Hr1G036830.1 , HORVU6Hr1G036830.2 , HORVU3Hr1G058170.1 , HORVU3Hr1G058170.2 , HORVU3Hr1G058170.3
Wheat TraesCS6B02G206800 , TraesCS3B02G262600 , TraesCS6D02G166400 , TraesCS3A02G233300 , TraesCS6A02G178000 , TraesCS3D02G219900
Populus -


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cDNA sequences
Sobic.003G237400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
2 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
3 Sobic.007G191600 exosome complex exonuclease, putative, expressed K12586: RRP43, EXOSC8, exosome complex component RRP43
4 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
5 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
6 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7
7 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
8 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
9 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
10 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
11 Sobic.001G518500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
12 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
13 Sobic.002G262200 expressed protein -
14 Sobic.008G102600 expressed protein -
15 Sobic.001G060300 expressed protein -
16 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
17 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
18 Sobic.007G184200 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
19 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
20 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta


Gene co-expression network
sample Sobic003G237400 Sobic003G237400 Sobic001G031900 Sobic001G031900 Sobic003G237400--Sobic001G031900 Sobic004G159000 Sobic004G159000 Sobic003G237400--Sobic004G159000 Sobic007G191600 Sobic007G191600 Sobic003G237400--Sobic007G191600 Sobic001G342200 Sobic001G342200 Sobic003G237400--Sobic001G342200 Sobic009G224400 Sobic009G224400 Sobic003G237400--Sobic009G224400 Sobic009G112900 Sobic009G112900 Sobic003G237400--Sobic009G112900 Sobic003G261100 Sobic003G261100 Sobic003G237400--Sobic003G261100 Sobic004G344800 Sobic004G344800 Sobic003G237400--Sobic004G344800 Sobic007G013900 Sobic007G013900 Sobic003G237400--Sobic007G013900 Sobic006G058900 Sobic006G058900 Sobic001G031900--Sobic006G058900 Sobic004G202100 Sobic004G202100 Sobic001G031900--Sobic004G202100 Sobic002G395000 Sobic002G395000 Sobic001G031900--Sobic002G395000 Sobic001G350600 Sobic001G350600 Sobic001G031900--Sobic001G350600 Sobic001G031900--Sobic004G344800 Sobic003G152900 Sobic003G152900 Sobic001G031900--Sobic003G152900 Sobic004G170400 Sobic004G170400 Sobic001G031900--Sobic004G170400 Sobic001G458800 Sobic001G458800 Sobic001G031900--Sobic001G458800 Sobic004G030000 Sobic004G030000 Sobic001G031900--Sobic004G030000 Sobic004G159000--Sobic007G013900 Sobic004G159000--Sobic004G344800 Sobic002G262200 Sobic002G262200 Sobic004G159000--Sobic002G262200 Sobic004G159000--Sobic004G030000 Sobic003G196600 Sobic003G196600 Sobic004G159000--Sobic003G196600 Sobic002G090700 Sobic002G090700 Sobic004G159000--Sobic002G090700 Sobic004G159000--Sobic003G152900 Sobic002G260200 Sobic002G260200 Sobic004G159000--Sobic002G260200 Sobic010G007400 Sobic010G007400 Sobic004G159000--Sobic010G007400 Sobic010G277000 Sobic010G277000 Sobic007G191600--Sobic010G277000 Sobic007G191600--Sobic003G261100 Sobic005G027300 Sobic005G027300 Sobic007G191600--Sobic005G027300 Sobic007G191600--Sobic003G237400 Sobic003G113400 Sobic003G113400 Sobic007G191600--Sobic003G113400 Sobic008G084100 Sobic008G084100 Sobic007G191600--Sobic008G084100 Sobic001G060300 Sobic001G060300 Sobic007G191600--Sobic001G060300 Sobic007G191600--Sobic001G342200 Sobic001G392800 Sobic001G392800 Sobic007G191600--Sobic001G392800 Sobic001G057300 Sobic001G057300 Sobic001G342200--Sobic001G057300 Sobic001G342200--Sobic001G060300 Sobic007G177200 Sobic007G177200 Sobic001G342200--Sobic007G177200 Sobic007G115100 Sobic007G115100 Sobic001G342200--Sobic007G115100 Sobic007G092100 Sobic007G092100 Sobic001G342200--Sobic007G092100 Sobic010G008800 Sobic010G008800 Sobic001G342200--Sobic010G008800 Sobic001G342200--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic001G342200--Sobic001G074700 Sobic001G342200--Sobic001G031900 Sobic001G073600 Sobic001G073600 Sobic009G224400--Sobic001G073600 Sobic009G191400 Sobic009G191400 Sobic009G224400--Sobic009G191400 Sobic009G224400--Sobic002G395000 Sobic007G119600 Sobic007G119600 Sobic009G224400--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic009G224400--Sobic003G135600 Sobic009G224400--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic009G224400--Sobic004G155100 Sobic003G034900 Sobic003G034900 Sobic009G224400--Sobic003G034900 Sobic009G224400--Sobic002G262200 Sobic008G102600 Sobic008G102600 Sobic009G112900--Sobic008G102600 Sobic001G518500 Sobic001G518500 Sobic009G112900--Sobic001G518500 Sobic009G112900--Sobic001G060300 Sobic009G112900--Sobic002G262200 Sobic008G175100 Sobic008G175100 Sobic009G112900--Sobic008G175100 Sobic009G112900--Sobic004G159000 Sobic009G112900--Sobic003G196600 Sobic009G112900--Sobic001G342200 Sobic009G112900--Sobic010G007400 Sobic001G370700 Sobic001G370700 Sobic003G261100--Sobic001G370700 Sobic002G131600 Sobic002G131600 Sobic003G261100--Sobic002G131600 Sobic003G261100--Sobic001G057300 Sobic006G035900 Sobic006G035900 Sobic003G261100--Sobic006G035900 Sobic009G115700 Sobic009G115700 Sobic003G261100--Sobic009G115700 Sobic003G261100--Sobic007G191600 Sobic003G261100--Sobic004G155100 Sobic001G214900 Sobic001G214900 Sobic003G261100--Sobic001G214900 Sobic001G501600 Sobic001G501600 Sobic003G261100--Sobic001G501600 Sobic004G344800--Sobic001G073600 Sobic004G344800--Sobic003G135600 Sobic004G344800--Sobic004G159000 Sobic001G035400 Sobic001G035400 Sobic004G344800--Sobic001G035400 Sobic004G344800--Sobic009G191400 Sobic004G344800--Sobic004G030000 Sobic004G344800--Sobic002G262200 Sobic002G396700 Sobic002G396700 Sobic004G344800--Sobic002G396700 Sobic004G344800--Sobic001G031900 Sobic009G215300 Sobic009G215300 Sobic007G013900--Sobic009G215300 Sobic007G013900--Sobic004G159000 Sobic007G013900--Sobic002G260200 Sobic006G013000 Sobic006G013000 Sobic007G013900--Sobic006G013000 Sobic002G309700 Sobic002G309700 Sobic007G013900--Sobic002G309700 Sobic001G031800 Sobic001G031800 Sobic007G013900--Sobic001G031800 Sobic004G260200 Sobic004G260200 Sobic007G013900--Sobic004G260200 Sobic007G013900--Sobic002G395000 Sobic008G136800 Sobic008G136800 Sobic007G013900--Sobic008G136800
Octagon: transcription factors


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