Gene annotation
Transcriptome id Sobic.009G112900.1
Synonym Sb09g018090
Functional annotation expressed protein
UniProt C5YWV5
Pfam PF05347
Panther DB PTHR13166 PTHR13166:SF2
NCBI CDD -
KEGG Orthology K18170; LYRM7, complex III assembly factor LYRM7
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62810 : complex 1 family protein / LVR family protein
RAP-DB (Rice) LOC_Os05g30030.1 : expressed protein
MaizeGDB (Corn) Zm00025a036980
Brachypodium -
Barley HORVU1Hr1G058770.1
Wheat TraesCS1A02G230100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G102600 expressed protein -
2 Sobic.001G518500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
3 Sobic.001G060300 expressed protein -
4 Sobic.002G262200 expressed protein -
5 Sobic.008G175100 expressed protein K17422: large subunit ribosomal protein L41
6 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
7 Sobic.003G196600 expressed protein -
8 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
9 Sobic.010G007400 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
10 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
11 Sobic.001G392800 NADH dehydrogenase 1 alpha subcomplex subunit 5, putative, expressed K03949: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5
12 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
13 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
14 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
15 Sobic.007G003100 transmembrane protein 18, putative, expressed -
16 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
17 Sobic.003G237400 plastidic ATP/ADP-transporter, putative, expressed K03301: ATP:ADP antiporter, AAA family
18 Sobic.002G079700 ribosomal protein L22, putative, expressed K02890: RP-L22, MRPL22, large subunit ribosomal protein L22
19 Sobic.003G167000 protein phosphotase protein, putative, expressed -
20 Sobic.003G340700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic009G112900 Sobic009G112900 Sobic008G102600 Sobic008G102600 Sobic009G112900--Sobic008G102600 Sobic001G518500 Sobic001G518500 Sobic009G112900--Sobic001G518500 Sobic001G060300 Sobic001G060300 Sobic009G112900--Sobic001G060300 Sobic002G262200 Sobic002G262200 Sobic009G112900--Sobic002G262200 Sobic008G175100 Sobic008G175100 Sobic009G112900--Sobic008G175100 Sobic004G159000 Sobic004G159000 Sobic009G112900--Sobic004G159000 Sobic003G196600 Sobic003G196600 Sobic009G112900--Sobic003G196600 Sobic001G342200 Sobic001G342200 Sobic009G112900--Sobic001G342200 Sobic010G007400 Sobic010G007400 Sobic009G112900--Sobic010G007400 Sobic001G443200 Sobic001G443200 Sobic008G102600--Sobic001G443200 Sobic008G102600--Sobic009G112900 Sobic003G196200 Sobic003G196200 Sobic008G102600--Sobic003G196200 Sobic004G000100 Sobic004G000100 Sobic008G102600--Sobic004G000100 Sobic004G045300 Sobic004G045300 Sobic008G102600--Sobic004G045300 Sobic008G110500 Sobic008G110500 Sobic008G102600--Sobic008G110500 Sobic001G387800 Sobic001G387800 Sobic008G102600--Sobic001G387800 Sobic001G112400 Sobic001G112400 Sobic008G102600--Sobic001G112400 Sobic004G039400 Sobic004G039400 Sobic008G102600--Sobic004G039400 Sobic001G518500--Sobic009G112900 Sobic003G129900 Sobic003G129900 Sobic001G518500--Sobic003G129900 Sobic009G224400 Sobic009G224400 Sobic001G518500--Sobic009G224400 Sobic005G019100 Sobic005G019100 Sobic001G518500--Sobic005G019100 Sobic001G387200 Sobic001G387200 Sobic001G518500--Sobic001G387200 Sobic001G518500--Sobic004G039400 Sobic001G518500--Sobic002G262200 Sobic002G079700 Sobic002G079700 Sobic001G518500--Sobic002G079700 Sobic007G171500 Sobic007G171500 Sobic001G518500--Sobic007G171500 Sobic001G060300--Sobic001G342200 Sobic001G178500 Sobic001G178500 Sobic001G060300--Sobic001G178500 Sobic001G214900 Sobic001G214900 Sobic001G060300--Sobic001G214900 Sobic004G262300 Sobic004G262300 Sobic001G060300--Sobic004G262300 Sobic001G060300--Sobic009G112900 Sobic002G402500 Sobic002G402500 Sobic001G060300--Sobic002G402500 Sobic008G136800 Sobic008G136800 Sobic001G060300--Sobic008G136800 Sobic010G194200 Sobic010G194200 Sobic001G060300--Sobic010G194200 Sobic009G012800 Sobic009G012800 Sobic001G060300--Sobic009G012800 Sobic002G262200--Sobic004G159000 Sobic002G262200--Sobic009G224400 Sobic002G395000 Sobic002G395000 Sobic002G262200--Sobic002G395000 Sobic003G135600 Sobic003G135600 Sobic002G262200--Sobic003G135600 Sobic004G344800 Sobic004G344800 Sobic002G262200--Sobic004G344800 Sobic001G073600 Sobic001G073600 Sobic002G262200--Sobic001G073600 Sobic002G262200--Sobic001G112400 Sobic007G013900 Sobic007G013900 Sobic002G262200--Sobic007G013900 Sobic009G191400 Sobic009G191400 Sobic002G262200--Sobic009G191400 Sobic008G175100--Sobic009G112900 Sobic008G175100--Sobic001G518500 Sobic008G175100--Sobic003G196600 Sobic008G175100--Sobic008G102600 Sobic007G019100 Sobic007G019100 Sobic008G175100--Sobic007G019100 Sobic008G175100--Sobic001G342200 Sobic006G124300 Sobic006G124300 Sobic008G175100--Sobic006G124300 Sobic004G286100 Sobic004G286100 Sobic008G175100--Sobic004G286100 Sobic008G175100--Sobic001G112400 Sobic004G159000--Sobic007G013900 Sobic004G159000--Sobic004G344800 Sobic004G159000--Sobic002G262200 Sobic004G030000 Sobic004G030000 Sobic004G159000--Sobic004G030000 Sobic004G159000--Sobic003G196600 Sobic002G090700 Sobic002G090700 Sobic004G159000--Sobic002G090700 Sobic003G152900 Sobic003G152900 Sobic004G159000--Sobic003G152900 Sobic002G260200 Sobic002G260200 Sobic004G159000--Sobic002G260200 Sobic004G159000--Sobic010G007400 Sobic003G196600--Sobic004G159000 Sobic004G256700 Sobic004G256700 Sobic003G196600--Sobic004G256700 Sobic003G340700 Sobic003G340700 Sobic003G196600--Sobic003G340700 Sobic003G196600--Sobic009G112900 Sobic003G196600--Sobic004G030000 Sobic003G196600--Sobic004G039400 Sobic003G196600--Sobic001G518500 Sobic003G196600--Sobic005G019100 Sobic003G196600--Sobic008G175100 Sobic001G057300 Sobic001G057300 Sobic001G342200--Sobic001G057300 Sobic001G342200--Sobic001G060300 Sobic007G177200 Sobic007G177200 Sobic001G342200--Sobic007G177200 Sobic007G115100 Sobic007G115100 Sobic001G342200--Sobic007G115100 Sobic007G092100 Sobic007G092100 Sobic001G342200--Sobic007G092100 Sobic010G008800 Sobic010G008800 Sobic001G342200--Sobic010G008800 Sobic004G170400 Sobic004G170400 Sobic001G342200--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic001G342200--Sobic001G074700 Sobic001G031900 Sobic001G031900 Sobic001G342200--Sobic001G031900 Sobic010G007400--Sobic004G030000 Sobic010G007400--Sobic002G090700 Sobic003G116600 Sobic003G116600 Sobic010G007400--Sobic003G116600 Sobic002G401700 Sobic002G401700 Sobic010G007400--Sobic002G401700 Sobic010G007400--Sobic004G159000 Sobic010G007400--Sobic001G031900 Sobic010G007400--Sobic007G013900 Sobic010G007400--Sobic003G152900 Sobic010G007400--Sobic001G074700
Octagon: transcription factors


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