Gene annotation
Transcriptome id Sobic.004G030000.1
Synonym MGP1, Sb04g002620
Functional annotation mitochondrial ATP synthase precursor, putative, expressed
UniProt C5XTU6
Pfam PF15704
Panther DB PTHR36013
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G21870 : copper ion binding;cobalt ion binding;zinc ion binding
RAP-DB (Rice) LOC_Os02g03860.1 : mitochondrial ATP synthase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018846 , Zm00025a025716 , Zm00025a001540 , Zm00025a034996 , Zm00025a015823
Brachypodium KQJ93129
Barley HORVU0Hr1G018510.1 , HORVU0Hr1G018510.3 , HORVU0Hr1G018510.2 , HORVU0Hr1G018510.4
Wheat TraesCS6B02G120900 , TraesCS6A02G092300 , TraesCS6D02G081200
Populus -


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cDNA sequences
Sobic.004G030000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G152900 -(PubMedID : 26976818)@dihydrolipoyl dehydrogenase 1, mitochondrial precursor, putative, expressed K00382: DLD, lpd, dihydrolipoamide dehydrogenase
2 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
3 Sobic.001G465800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
4 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
5 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
6 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
7 Sobic.010G007400 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
8 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
9 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
10 Sobic.001G181500 expressed protein -
11 Sobic.004G259200 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
12 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
13 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
14 Sobic.009G215300 fiber protein Fb11, putative, expressed -
15 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
16 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
17 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
18 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
19 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
20 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8


Gene co-expression network
sample Sobic004G030000 Sobic004G030000 Sobic003G152900 Sobic003G152900 Sobic004G030000--Sobic003G152900 Sobic001G350600 Sobic001G350600 Sobic004G030000--Sobic001G350600 Sobic001G465800 Sobic001G465800 Sobic004G030000--Sobic001G465800 Sobic002G309700 Sobic002G309700 Sobic004G030000--Sobic002G309700 Sobic001G074700 Sobic001G074700 Sobic004G030000--Sobic001G074700 Sobic004G170400 Sobic004G170400 Sobic004G030000--Sobic004G170400 Sobic010G007400 Sobic010G007400 Sobic004G030000--Sobic010G007400 Sobic004G344800 Sobic004G344800 Sobic004G030000--Sobic004G344800 Sobic004G159000 Sobic004G159000 Sobic004G030000--Sobic004G159000 Sobic003G152900--Sobic004G030000 Sobic003G152900--Sobic001G074700 Sobic003G152900--Sobic004G170400 Sobic003G152900--Sobic001G350600 Sobic010G154700 Sobic010G154700 Sobic003G152900--Sobic010G154700 Sobic001G031900 Sobic001G031900 Sobic003G152900--Sobic001G031900 Sobic002G090700 Sobic002G090700 Sobic003G152900--Sobic002G090700 Sobic003G152900--Sobic004G159000 Sobic004G066800 Sobic004G066800 Sobic003G152900--Sobic004G066800 Sobic001G350600--Sobic004G170400 Sobic004G259200 Sobic004G259200 Sobic001G350600--Sobic004G259200 Sobic002G356400 Sobic002G356400 Sobic001G350600--Sobic002G356400 Sobic001G350600--Sobic001G074700 Sobic001G350600--Sobic001G465800 Sobic003G209000 Sobic003G209000 Sobic001G350600--Sobic003G209000 Sobic001G404800 Sobic001G404800 Sobic001G350600--Sobic001G404800 Sobic009G119900 Sobic009G119900 Sobic001G350600--Sobic009G119900 Sobic001G350600--Sobic004G030000 Sobic001G465800--Sobic002G356400 Sobic001G465800--Sobic004G259200 Sobic004G260200 Sobic004G260200 Sobic001G465800--Sobic004G260200 Sobic001G465800--Sobic004G170400 Sobic001G465800--Sobic001G350600 Sobic001G465800--Sobic002G309700 Sobic001G465800--Sobic001G074700 Sobic001G465800--Sobic001G404800 Sobic001G047800 Sobic001G047800 Sobic001G465800--Sobic001G047800 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G309700--Sobic002G356400 Sobic009G215300 Sobic009G215300 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic002G309700--Sobic001G074700 Sobic002G296200 Sobic002G296200 Sobic002G309700--Sobic002G296200 Sobic002G309700--Sobic001G465800 Sobic003G215700 Sobic003G215700 Sobic002G309700--Sobic003G215700 Sobic001G074700--Sobic004G170400 Sobic001G074700--Sobic001G350600 Sobic001G074700--Sobic004G259200 Sobic001G074700--Sobic002G309700 Sobic001G074700--Sobic010G154700 Sobic001G074700--Sobic002G296200 Sobic001G074700--Sobic009G119900 Sobic001G074700--Sobic001G047800 Sobic002G418400 Sobic002G418400 Sobic001G074700--Sobic002G418400 Sobic004G170400--Sobic001G350600 Sobic004G170400--Sobic004G259200 Sobic004G170400--Sobic001G074700 Sobic004G170400--Sobic001G465800 Sobic004G170400--Sobic009G119900 Sobic004G170400--Sobic002G356400 Sobic004G170400--Sobic003G209000 Sobic004G310300 Sobic004G310300 Sobic004G170400--Sobic004G310300 Sobic004G170400--Sobic002G418400 Sobic010G007400--Sobic004G030000 Sobic010G007400--Sobic002G090700 Sobic003G116600 Sobic003G116600 Sobic010G007400--Sobic003G116600 Sobic002G401700 Sobic002G401700 Sobic010G007400--Sobic002G401700 Sobic010G007400--Sobic004G159000 Sobic010G007400--Sobic001G031900 Sobic007G013900 Sobic007G013900 Sobic010G007400--Sobic007G013900 Sobic010G007400--Sobic003G152900 Sobic010G007400--Sobic001G074700 Sobic001G073600 Sobic001G073600 Sobic004G344800--Sobic001G073600 Sobic003G135600 Sobic003G135600 Sobic004G344800--Sobic003G135600 Sobic004G344800--Sobic004G159000 Sobic001G035400 Sobic001G035400 Sobic004G344800--Sobic001G035400 Sobic009G191400 Sobic009G191400 Sobic004G344800--Sobic009G191400 Sobic004G344800--Sobic004G030000 Sobic002G262200 Sobic002G262200 Sobic004G344800--Sobic002G262200 Sobic002G396700 Sobic002G396700 Sobic004G344800--Sobic002G396700 Sobic004G344800--Sobic001G031900 Sobic004G159000--Sobic007G013900 Sobic004G159000--Sobic004G344800 Sobic004G159000--Sobic002G262200 Sobic004G159000--Sobic004G030000 Sobic003G196600 Sobic003G196600 Sobic004G159000--Sobic003G196600 Sobic004G159000--Sobic002G090700 Sobic004G159000--Sobic003G152900 Sobic002G260200 Sobic002G260200 Sobic004G159000--Sobic002G260200 Sobic004G159000--Sobic010G007400
Octagon: transcription factors


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