Gene annotation
Transcriptome id Sobic.004G344800.1
Synonym Sb04g037200
Functional annotation NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed
UniProt C5XVW3
Pfam PF01370
Panther DB PTHR12126 PTHR12126:SF7
NCBI CDD KOG2865; NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit
KEGG Orthology K03953; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G20360 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os02g57180.1 : NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a022603
Brachypodium KQK01351
Barley HORVU6Hr1G090720.1 , HORVU6Hr1G090720.2 , HORVU6Hr1G090720.3
Wheat TraesCS6A02G389100 , TraesCS6D02G374400 , TraesCS6B02G430100
Populus -


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cDNA sequences
Sobic.004G344800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
2 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
3 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
4 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
5 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
6 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
7 Sobic.002G262200 expressed protein -
8 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
9 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
10 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
11 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
12 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
13 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
14 Sobic.009G117200 expressed protein -
15 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
16 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
17 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
18 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
19 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
20 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G


Gene co-expression network
sample Sobic004G344800 Sobic004G344800 Sobic001G073600 Sobic001G073600 Sobic004G344800--Sobic001G073600 Sobic003G135600 Sobic003G135600 Sobic004G344800--Sobic003G135600 Sobic004G159000 Sobic004G159000 Sobic004G344800--Sobic004G159000 Sobic001G035400 Sobic001G035400 Sobic004G344800--Sobic001G035400 Sobic009G191400 Sobic009G191400 Sobic004G344800--Sobic009G191400 Sobic004G030000 Sobic004G030000 Sobic004G344800--Sobic004G030000 Sobic002G262200 Sobic002G262200 Sobic004G344800--Sobic002G262200 Sobic002G396700 Sobic002G396700 Sobic004G344800--Sobic002G396700 Sobic001G031900 Sobic001G031900 Sobic004G344800--Sobic001G031900 Sobic001G073600--Sobic009G191400 Sobic009G224400 Sobic009G224400 Sobic001G073600--Sobic009G224400 Sobic001G073600--Sobic003G135600 Sobic002G395000 Sobic002G395000 Sobic001G073600--Sobic002G395000 Sobic001G073600--Sobic004G344800 Sobic007G119600 Sobic007G119600 Sobic001G073600--Sobic007G119600 Sobic004G347600 Sobic004G347600 Sobic001G073600--Sobic004G347600 Sobic001G458800 Sobic001G458800 Sobic001G073600--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic001G073600--Sobic004G155100 Sobic003G135600--Sobic004G155100 Sobic003G135600--Sobic002G395000 Sobic003G135600--Sobic001G073600 Sobic003G135600--Sobic009G224400 Sobic002G309700 Sobic002G309700 Sobic003G135600--Sobic002G309700 Sobic003G135600--Sobic009G191400 Sobic001G181500 Sobic001G181500 Sobic003G135600--Sobic001G181500 Sobic009G211900 Sobic009G211900 Sobic003G135600--Sobic009G211900 Sobic004G260200 Sobic004G260200 Sobic003G135600--Sobic004G260200 Sobic007G013900 Sobic007G013900 Sobic004G159000--Sobic007G013900 Sobic004G159000--Sobic004G344800 Sobic004G159000--Sobic002G262200 Sobic004G159000--Sobic004G030000 Sobic003G196600 Sobic003G196600 Sobic004G159000--Sobic003G196600 Sobic002G090700 Sobic002G090700 Sobic004G159000--Sobic002G090700 Sobic003G152900 Sobic003G152900 Sobic004G159000--Sobic003G152900 Sobic002G260200 Sobic002G260200 Sobic004G159000--Sobic002G260200 Sobic010G007400 Sobic010G007400 Sobic004G159000--Sobic010G007400 Sobic001G035400--Sobic004G344800 Sobic006G203900 Sobic006G203900 Sobic001G035400--Sobic006G203900 Sobic008G084100 Sobic008G084100 Sobic001G035400--Sobic008G084100 Sobic007G092100 Sobic007G092100 Sobic001G035400--Sobic007G092100 Sobic009G164700 Sobic009G164700 Sobic001G035400--Sobic009G164700 Sobic002G087000 Sobic002G087000 Sobic001G035400--Sobic002G087000 Sobic001G035400--Sobic001G073600 Sobic001G443200 Sobic001G443200 Sobic001G035400--Sobic001G443200 Sobic001G116000 Sobic001G116000 Sobic001G035400--Sobic001G116000 Sobic009G191400--Sobic001G073600 Sobic009G191400--Sobic009G224400 Sobic009G191400--Sobic004G347600 Sobic009G191400--Sobic007G119600 Sobic009G191400--Sobic003G135600 Sobic009G191400--Sobic004G344800 Sobic009G191400--Sobic002G262200 Sobic009G191400--Sobic001G458800 Sobic009G191400--Sobic002G396700 Sobic004G030000--Sobic003G152900 Sobic001G350600 Sobic001G350600 Sobic004G030000--Sobic001G350600 Sobic001G465800 Sobic001G465800 Sobic004G030000--Sobic001G465800 Sobic004G030000--Sobic002G309700 Sobic001G074700 Sobic001G074700 Sobic004G030000--Sobic001G074700 Sobic004G170400 Sobic004G170400 Sobic004G030000--Sobic004G170400 Sobic004G030000--Sobic010G007400 Sobic004G030000--Sobic004G344800 Sobic004G030000--Sobic004G159000 Sobic002G262200--Sobic004G159000 Sobic002G262200--Sobic009G224400 Sobic002G262200--Sobic002G395000 Sobic002G262200--Sobic003G135600 Sobic002G262200--Sobic004G344800 Sobic002G262200--Sobic001G073600 Sobic001G112400 Sobic001G112400 Sobic002G262200--Sobic001G112400 Sobic002G262200--Sobic007G013900 Sobic002G262200--Sobic009G191400 Sobic002G396700--Sobic004G344800 Sobic002G396700--Sobic009G191400 Sobic007G171500 Sobic007G171500 Sobic002G396700--Sobic007G171500 Sobic002G396700--Sobic001G112400 Sobic001G115700 Sobic001G115700 Sobic002G396700--Sobic001G115700 Sobic009G089700 Sobic009G089700 Sobic002G396700--Sobic009G089700 Sobic002G396700--Sobic001G458800 Sobic002G396700--Sobic002G262200 Sobic001G465400 Sobic001G465400 Sobic002G396700--Sobic001G465400 Sobic006G058900 Sobic006G058900 Sobic001G031900--Sobic006G058900 Sobic004G202100 Sobic004G202100 Sobic001G031900--Sobic004G202100 Sobic001G031900--Sobic002G395000 Sobic001G031900--Sobic001G350600 Sobic001G031900--Sobic004G344800 Sobic001G031900--Sobic003G152900 Sobic001G031900--Sobic004G170400 Sobic001G031900--Sobic001G458800 Sobic001G031900--Sobic004G030000
Octagon: transcription factors


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