Gene annotation
Transcriptome id Sobic.009G117200.2,Sobic.009G117200.1
Synonym Sb09g018480
Functional annotation expressed protein
UniProt C5YX80 , A0A1Z5R279
Pfam -
Panther DB PTHR36358 PTHR36358:SF2 PTHR36358 PTHR36358:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g30860.1 : expressed protein
MaizeGDB (Corn) Zm00025a043325 , Zm00025a037647
Brachypodium KQK11420 , KQK06624
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G117200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G206700 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
2 Sobic.004G056400 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
3 Sobic.003G428200 MEMO1, putative, expressed K06990: MEMO1 family protein
4 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
5 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
6 Sobic.009G211900 expressed protein -
7 Sobic.003G096000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
8 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
9 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
10 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
11 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
12 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
13 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
14 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
15 Sobic.001G181500 expressed protein -
16 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
17 Sobic.003G322300 expressed protein -
18 Sobic.009G215300 fiber protein Fb11, putative, expressed -
19 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
20 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12


Gene co-expression network
sample Sobic009G117200 Sobic009G117200 Sobic001G206700 Sobic001G206700 Sobic009G117200--Sobic001G206700 Sobic004G056400 Sobic004G056400 Sobic009G117200--Sobic004G056400 Sobic003G428200 Sobic003G428200 Sobic009G117200--Sobic003G428200 Sobic004G344800 Sobic004G344800 Sobic009G117200--Sobic004G344800 Sobic001G073600 Sobic001G073600 Sobic009G117200--Sobic001G073600 Sobic009G211900 Sobic009G211900 Sobic009G117200--Sobic009G211900 Sobic003G096000 Sobic003G096000 Sobic009G117200--Sobic003G096000 Sobic002G309700 Sobic002G309700 Sobic009G117200--Sobic002G309700 Sobic006G013000 Sobic006G013000 Sobic009G117200--Sobic006G013000 Sobic001G206700--Sobic009G117200 Sobic009G215300 Sobic009G215300 Sobic001G206700--Sobic009G215300 Sobic001G181500 Sobic001G181500 Sobic001G206700--Sobic001G181500 Sobic004G155100 Sobic004G155100 Sobic001G206700--Sobic004G155100 Sobic003G135600 Sobic003G135600 Sobic001G206700--Sobic003G135600 Sobic001G206700--Sobic001G073600 Sobic001G206700--Sobic009G211900 Sobic009G191400 Sobic009G191400 Sobic001G206700--Sobic009G191400 Sobic001G206700--Sobic002G309700 Sobic004G056400--Sobic003G096000 Sobic010G101600 Sobic010G101600 Sobic004G056400--Sobic010G101600 Sobic004G056400--Sobic009G117200 Sobic010G089500 Sobic010G089500 Sobic004G056400--Sobic010G089500 Sobic001G370700 Sobic001G370700 Sobic004G056400--Sobic001G370700 Sobic001G350600 Sobic001G350600 Sobic004G056400--Sobic001G350600 Sobic004G056400--Sobic006G013000 Sobic004G056400--Sobic002G309700 Sobic001G030300 Sobic001G030300 Sobic004G056400--Sobic001G030300 Sobic003G428200--Sobic009G117200 Sobic004G204800 Sobic004G204800 Sobic003G428200--Sobic004G204800 Sobic001G010700 Sobic001G010700 Sobic003G428200--Sobic001G010700 Sobic009G139800 Sobic009G139800 Sobic003G428200--Sobic009G139800 Sobic007G076300 Sobic007G076300 Sobic003G428200--Sobic007G076300 Sobic001G109300 Sobic001G109300 Sobic003G428200--Sobic001G109300 Sobic009G093200 Sobic009G093200 Sobic003G428200--Sobic009G093200 Sobic002G257400 Sobic002G257400 Sobic003G428200--Sobic002G257400 Sobic007G176200 Sobic007G176200 Sobic003G428200--Sobic007G176200 Sobic004G344800--Sobic001G073600 Sobic004G344800--Sobic003G135600 Sobic004G159000 Sobic004G159000 Sobic004G344800--Sobic004G159000 Sobic001G035400 Sobic001G035400 Sobic004G344800--Sobic001G035400 Sobic004G344800--Sobic009G191400 Sobic004G030000 Sobic004G030000 Sobic004G344800--Sobic004G030000 Sobic002G262200 Sobic002G262200 Sobic004G344800--Sobic002G262200 Sobic002G396700 Sobic002G396700 Sobic004G344800--Sobic002G396700 Sobic001G031900 Sobic001G031900 Sobic004G344800--Sobic001G031900 Sobic001G073600--Sobic009G191400 Sobic009G224400 Sobic009G224400 Sobic001G073600--Sobic009G224400 Sobic001G073600--Sobic003G135600 Sobic002G395000 Sobic002G395000 Sobic001G073600--Sobic002G395000 Sobic001G073600--Sobic004G344800 Sobic007G119600 Sobic007G119600 Sobic001G073600--Sobic007G119600 Sobic004G347600 Sobic004G347600 Sobic001G073600--Sobic004G347600 Sobic001G458800 Sobic001G458800 Sobic001G073600--Sobic001G458800 Sobic001G073600--Sobic004G155100 Sobic009G211900--Sobic009G215300 Sobic006G124300 Sobic006G124300 Sobic009G211900--Sobic006G124300 Sobic009G211900--Sobic001G181500 Sobic006G203900 Sobic006G203900 Sobic009G211900--Sobic006G203900 Sobic009G211900--Sobic003G135600 Sobic009G211900--Sobic002G309700 Sobic008G136800 Sobic008G136800 Sobic009G211900--Sobic008G136800 Sobic009G211900--Sobic001G073600 Sobic004G260200 Sobic004G260200 Sobic009G211900--Sobic004G260200 Sobic003G096000--Sobic004G056400 Sobic003G096000--Sobic010G089500 Sobic003G096000--Sobic001G350600 Sobic003G096000--Sobic010G101600 Sobic002G356400 Sobic002G356400 Sobic003G096000--Sobic002G356400 Sobic003G096000--Sobic001G030300 Sobic002G180300 Sobic002G180300 Sobic003G096000--Sobic002G180300 Sobic003G096000--Sobic006G013000 Sobic001G047800 Sobic001G047800 Sobic003G096000--Sobic001G047800 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G309700--Sobic002G356400 Sobic002G309700--Sobic009G215300 Sobic001G404800 Sobic001G404800 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G296200 Sobic002G296200 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic003G215700 Sobic003G215700 Sobic002G309700--Sobic003G215700 Sobic006G013000--Sobic002G296200 Sobic006G013000--Sobic002G309700 Sobic006G013000--Sobic001G074700 Sobic006G013000--Sobic002G180300 Sobic006G013000--Sobic001G047800 Sobic007G013900 Sobic007G013900 Sobic006G013000--Sobic007G013900 Sobic007G134900 Sobic007G134900 Sobic006G013000--Sobic007G134900 Sobic006G013000--Sobic001G404800 Sobic006G013000--Sobic009G215300
Octagon: transcription factors


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