Gene annotation
Transcriptome id Sobic.002G396700.1
Synonym Sb02g041180, CI51
Functional annotation NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed
UniProt A0A1B6QFX4
Pfam PF10531 PF10589 PF01512
Panther DB PTHR11780
NCBI CDD -
KEGG Orthology K03942; NADH dehydrogenase (ubiquinone) flavoprotein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08530 : 51 kDa subunit of complex I
RAP-DB (Rice) LOC_Os07g45090.1 : NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a015319 , Zm00025a048968
Brachypodium KQK20322
Barley HORVU2Hr1G051740.5 , HORVU2Hr1G051740.4 , HORVU2Hr1G051740.7 , HORVU2Hr1G051740.6 , HORVU2Hr1G051740.1 , HORVU2Hr1G051740.3 , HORVU2Hr1G051740.2 , HORVU2Hr1G051740.9 , HORVU2Hr1G051740.8 , HORVU2Hr1G051740.10
Wheat TraesCS2D02G237400 , TraesCS2D02G237400 , TraesCS2A02G234200 , TraesCS2A02G234200 , TraesCS2B02G259100 , TraesCS2B02G259100
Populus -


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cDNA sequences
Sobic.002G396700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
2 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
3 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
4 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
5 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1
6 Sobic.009G089700 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
7 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
8 Sobic.002G262200 expressed protein -
9 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
10 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
11 Sobic.010G040900 trafficking protein particle complex subunit 4, putative, expressed -
12 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
13 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
14 Sobic.001G008100 expressed protein K17966: transmembrane protein 70, mitochondrial
15 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
16 Sobic.003G261800 expressed protein -
17 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
18 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
19 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
20 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha


Gene co-expression network
sample Sobic002G396700 Sobic002G396700 Sobic004G344800 Sobic004G344800 Sobic002G396700--Sobic004G344800 Sobic009G191400 Sobic009G191400 Sobic002G396700--Sobic009G191400 Sobic007G171500 Sobic007G171500 Sobic002G396700--Sobic007G171500 Sobic001G112400 Sobic001G112400 Sobic002G396700--Sobic001G112400 Sobic001G115700 Sobic001G115700 Sobic002G396700--Sobic001G115700 Sobic009G089700 Sobic009G089700 Sobic002G396700--Sobic009G089700 Sobic001G458800 Sobic001G458800 Sobic002G396700--Sobic001G458800 Sobic002G262200 Sobic002G262200 Sobic002G396700--Sobic002G262200 Sobic001G465400 Sobic001G465400 Sobic002G396700--Sobic001G465400 Sobic001G073600 Sobic001G073600 Sobic004G344800--Sobic001G073600 Sobic003G135600 Sobic003G135600 Sobic004G344800--Sobic003G135600 Sobic004G159000 Sobic004G159000 Sobic004G344800--Sobic004G159000 Sobic001G035400 Sobic001G035400 Sobic004G344800--Sobic001G035400 Sobic004G344800--Sobic009G191400 Sobic004G030000 Sobic004G030000 Sobic004G344800--Sobic004G030000 Sobic004G344800--Sobic002G262200 Sobic004G344800--Sobic002G396700 Sobic001G031900 Sobic001G031900 Sobic004G344800--Sobic001G031900 Sobic009G191400--Sobic001G073600 Sobic009G224400 Sobic009G224400 Sobic009G191400--Sobic009G224400 Sobic004G347600 Sobic004G347600 Sobic009G191400--Sobic004G347600 Sobic007G119600 Sobic007G119600 Sobic009G191400--Sobic007G119600 Sobic009G191400--Sobic003G135600 Sobic009G191400--Sobic004G344800 Sobic009G191400--Sobic002G262200 Sobic009G191400--Sobic001G458800 Sobic009G191400--Sobic002G396700 Sobic004G297700 Sobic004G297700 Sobic007G171500--Sobic004G297700 Sobic003G034900 Sobic003G034900 Sobic007G171500--Sobic003G034900 Sobic007G171500--Sobic001G458800 Sobic007G171500--Sobic009G224400 Sobic010G032600 Sobic010G032600 Sobic007G171500--Sobic010G032600 Sobic002G395000 Sobic002G395000 Sobic007G171500--Sobic002G395000 Sobic006G058900 Sobic006G058900 Sobic007G171500--Sobic006G058900 Sobic007G171500--Sobic009G191400 Sobic001G457000 Sobic001G457000 Sobic007G171500--Sobic001G457000 Sobic001G112400--Sobic002G262200 Sobic001G443200 Sobic001G443200 Sobic001G112400--Sobic001G443200 Sobic005G184200 Sobic005G184200 Sobic001G112400--Sobic005G184200 Sobic001G378200 Sobic001G378200 Sobic001G112400--Sobic001G378200 Sobic001G112400--Sobic004G347600 Sobic004G039400 Sobic004G039400 Sobic001G112400--Sobic004G039400 Sobic001G112400--Sobic004G344800 Sobic001G112400--Sobic002G396700 Sobic001G112400--Sobic001G465400 Sobic001G115700--Sobic001G458800 Sobic001G115700--Sobic003G034900 Sobic001G115700--Sobic001G465400 Sobic008G072200 Sobic008G072200 Sobic001G115700--Sobic008G072200 Sobic001G115700--Sobic004G347600 Sobic005G018800 Sobic005G018800 Sobic001G115700--Sobic005G018800 Sobic001G115700--Sobic009G191400 Sobic003G200800 Sobic003G200800 Sobic001G115700--Sobic003G200800 Sobic002G186300 Sobic002G186300 Sobic001G115700--Sobic002G186300 Sobic009G089700--Sobic002G396700 Sobic006G029000 Sobic006G029000 Sobic009G089700--Sobic006G029000 Sobic008G085700 Sobic008G085700 Sobic009G089700--Sobic008G085700 Sobic003G261800 Sobic003G261800 Sobic009G089700--Sobic003G261800 Sobic005G111900 Sobic005G111900 Sobic009G089700--Sobic005G111900 Sobic001G023100 Sobic001G023100 Sobic009G089700--Sobic001G023100 Sobic008G145100 Sobic008G145100 Sobic009G089700--Sobic008G145100 Sobic001G358500 Sobic001G358500 Sobic009G089700--Sobic001G358500 Sobic009G089700--Sobic003G200800 Sobic001G458800--Sobic003G034900 Sobic001G458800--Sobic009G224400 Sobic001G458800--Sobic006G058900 Sobic001G458800--Sobic001G115700 Sobic001G458800--Sobic007G171500 Sobic001G458800--Sobic001G073600 Sobic001G458800--Sobic002G186300 Sobic001G458800--Sobic002G395000 Sobic001G458800--Sobic001G031900 Sobic002G262200--Sobic004G159000 Sobic002G262200--Sobic009G224400 Sobic002G262200--Sobic002G395000 Sobic002G262200--Sobic003G135600 Sobic002G262200--Sobic004G344800 Sobic002G262200--Sobic001G073600 Sobic002G262200--Sobic001G112400 Sobic007G013900 Sobic007G013900 Sobic002G262200--Sobic007G013900 Sobic002G262200--Sobic009G191400 Sobic001G465400--Sobic003G034900 Sobic006G012700 Sobic006G012700 Sobic001G465400--Sobic006G012700 Sobic001G465400--Sobic001G115700 Sobic001G465400--Sobic001G378200 Sobic004G078700 Sobic004G078700 Sobic001G465400--Sobic004G078700 Sobic004G000100 Sobic004G000100 Sobic001G465400--Sobic004G000100 Sobic001G047600 Sobic001G047600 Sobic001G465400--Sobic001G047600 Sobic001G008100 Sobic001G008100 Sobic001G465400--Sobic001G008100 Sobic001G465400--Sobic004G347600
Octagon: transcription factors


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