Gene annotation
Transcriptome id Sobic.001G008100.1
Synonym Sb01g000810
Functional annotation expressed protein
UniProt C5WS07
Pfam PF06979
Panther DB PTHR13281 PTHR13281:SF0
NCBI CDD KOG4478; Uncharacterized membrane protein
KEGG Orthology K17966; transmembrane protein 70, mitochondrial
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35790 : -
RAP-DB (Rice) LOC_Os03g63680.1 : expressed protein
MaizeGDB (Corn) Zm00025a009085
Brachypodium KQK12045
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G008100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
2 Sobic.006G041800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
3 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
4 Sobic.010G040900 trafficking protein particle complex subunit 4, putative, expressed -
5 Sobic.001G387800 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
6 Sobic.003G276100 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
7 Sobic.002G079700 ribosomal protein L22, putative, expressed K02890: RP-L22, MRPL22, large subunit ribosomal protein L22
8 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
9 Sobic.002G276800 ER lumen protein retaining receptor, putative, expressed -
10 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
11 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
12 Sobic.007G012900 50S ribosomal protein L19, chloroplast precursor, putative, expressed -
13 Sobic.006G012700 expressed protein -
14 Sobic.007G206300 ribosomal protein S17, putative, expressed K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
15 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
16 Sobic.001G178500 chloroplast 30S ribosomal protein S19, putative, expressed K02965: RP-S19, small subunit ribosomal protein S19
17 Sobic.001G387200 expressed protein -
18 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
19 Sobic.003G261800 expressed protein -
20 Sobic.002G136400 expressed protein -


Gene co-expression network
sample Sobic001G008100 Sobic001G008100 Sobic004G039400 Sobic004G039400 Sobic001G008100--Sobic004G039400 Sobic006G041800 Sobic006G041800 Sobic001G008100--Sobic006G041800 Sobic001G465400 Sobic001G465400 Sobic001G008100--Sobic001G465400 Sobic010G040900 Sobic010G040900 Sobic001G008100--Sobic010G040900 Sobic001G387800 Sobic001G387800 Sobic001G008100--Sobic001G387800 Sobic003G276100 Sobic003G276100 Sobic001G008100--Sobic003G276100 Sobic002G079700 Sobic002G079700 Sobic001G008100--Sobic002G079700 Sobic009G191400 Sobic009G191400 Sobic001G008100--Sobic009G191400 Sobic002G276800 Sobic002G276800 Sobic001G008100--Sobic002G276800 Sobic004G039400--Sobic001G008100 Sobic001G073600 Sobic001G073600 Sobic004G039400--Sobic001G073600 Sobic004G039400--Sobic010G040900 Sobic001G443200 Sobic001G443200 Sobic004G039400--Sobic001G443200 Sobic002G262200 Sobic002G262200 Sobic004G039400--Sobic002G262200 Sobic004G039400--Sobic009G191400 Sobic004G344800 Sobic004G344800 Sobic004G039400--Sobic004G344800 Sobic001G387200 Sobic001G387200 Sobic004G039400--Sobic001G387200 Sobic004G039400--Sobic002G079700 Sobic007G119600 Sobic007G119600 Sobic006G041800--Sobic007G119600 Sobic006G041800--Sobic001G008100 Sobic006G041800--Sobic003G276100 Sobic001G485300 Sobic001G485300 Sobic006G041800--Sobic001G485300 Sobic006G041800--Sobic002G276800 Sobic007G012900 Sobic007G012900 Sobic006G041800--Sobic007G012900 Sobic003G388700 Sobic003G388700 Sobic006G041800--Sobic003G388700 Sobic006G041800--Sobic001G387800 Sobic002G255400 Sobic002G255400 Sobic006G041800--Sobic002G255400 Sobic003G034900 Sobic003G034900 Sobic001G465400--Sobic003G034900 Sobic006G012700 Sobic006G012700 Sobic001G465400--Sobic006G012700 Sobic001G115700 Sobic001G115700 Sobic001G465400--Sobic001G115700 Sobic001G378200 Sobic001G378200 Sobic001G465400--Sobic001G378200 Sobic004G078700 Sobic004G078700 Sobic001G465400--Sobic004G078700 Sobic004G000100 Sobic004G000100 Sobic001G465400--Sobic004G000100 Sobic001G047600 Sobic001G047600 Sobic001G465400--Sobic001G047600 Sobic001G465400--Sobic001G008100 Sobic004G347600 Sobic004G347600 Sobic001G465400--Sobic004G347600 Sobic010G040900--Sobic004G039400 Sobic010G040900--Sobic001G443200 Sobic010G040900--Sobic009G191400 Sobic010G040900--Sobic001G008100 Sobic001G178500 Sobic001G178500 Sobic010G040900--Sobic001G178500 Sobic006G126000 Sobic006G126000 Sobic010G040900--Sobic006G126000 Sobic003G261800 Sobic003G261800 Sobic010G040900--Sobic003G261800 Sobic003G135600 Sobic003G135600 Sobic010G040900--Sobic003G135600 Sobic010G040900--Sobic004G344800 Sobic003G196200 Sobic003G196200 Sobic001G387800--Sobic003G196200 Sobic001G387800--Sobic001G178500 Sobic001G387800--Sobic001G008100 Sobic001G387800--Sobic004G039400 Sobic001G387800--Sobic007G119600 Sobic001G387800--Sobic009G191400 Sobic001G387800--Sobic002G079700 Sobic007G206300 Sobic007G206300 Sobic001G387800--Sobic007G206300 Sobic001G387800--Sobic001G465400 Sobic003G276100--Sobic007G012900 Sobic003G276100--Sobic006G041800 Sobic003G276100--Sobic001G008100 Sobic003G276100--Sobic007G119600 Sobic003G276100--Sobic001G443200 Sobic003G276100--Sobic009G191400 Sobic003G276100--Sobic001G387200 Sobic003G276100--Sobic001G178500 Sobic007G117800 Sobic007G117800 Sobic003G276100--Sobic007G117800 Sobic002G079700--Sobic001G178500 Sobic002G079700--Sobic003G135600 Sobic002G079700--Sobic004G039400 Sobic002G079700--Sobic001G008100 Sobic002G079700--Sobic009G191400 Sobic004G045300 Sobic004G045300 Sobic002G079700--Sobic004G045300 Sobic009G224400 Sobic009G224400 Sobic002G079700--Sobic009G224400 Sobic002G079700--Sobic003G388700 Sobic002G079700--Sobic001G073600 Sobic009G191400--Sobic001G073600 Sobic009G191400--Sobic009G224400 Sobic009G191400--Sobic004G347600 Sobic009G191400--Sobic007G119600 Sobic009G191400--Sobic003G135600 Sobic009G191400--Sobic004G344800 Sobic009G191400--Sobic002G262200 Sobic001G458800 Sobic001G458800 Sobic009G191400--Sobic001G458800 Sobic002G396700 Sobic002G396700 Sobic009G191400--Sobic002G396700 Sobic002G276800--Sobic001G485300 Sobic002G276800--Sobic001G008100 Sobic007G148400 Sobic007G148400 Sobic002G276800--Sobic007G148400 Sobic002G276800--Sobic006G041800 Sobic003G190600 Sobic003G190600 Sobic002G276800--Sobic003G190600 Sobic003G058500 Sobic003G058500 Sobic002G276800--Sobic003G058500 Sobic001G061200 Sobic001G061200 Sobic002G276800--Sobic001G061200 Sobic001G193100 Sobic001G193100 Sobic002G276800--Sobic001G193100 Sobic002G401700 Sobic002G401700 Sobic002G276800--Sobic002G401700
Octagon: transcription factors


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