Gene annotation
Transcriptome id Sobic.009G224400.1,Sobic.009G224400.2
Synonym Sb09g027790
Functional annotation ATP synthase, putative, expressed
UniProt O24345 , O24346 , A0A1B6PA67 , A0A1B6PA06 , A1E9T1
Pfam PF11421 PF00306 PF02874 PF00006 PF11421 PF02874 PF00306 PF00006
Panther DB PTHR15184 PTHR15184:SF45
NCBI CDD -
KEGG Orthology K02133; ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
Gene Ontology GO:0016887; ATPase activity GO:0006754ATP biosynthetic process GO:0005524ATP binding GO:0000275mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) GO:0016887ATPase activity GO:0006754ATP biosynthetic process GO:0005524ATP binding GO:0000275mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)


Orthologs (automatic annotation)
TAIR AT5G08680 : ATP synthase alpha/beta family protein
RAP-DB (Rice) LOC_Os05g47980.1 : ATP synthase, putative, expressed
MaizeGDB (Corn) Zm00025a044483 , Zm00025a027996 , Zm00025a036542
Brachypodium KQK05003 , KQK09226
Barley HORVU3Hr1G063590.1 , HORVU3Hr1G063590.2 , HORVU3Hr1G063590.3 , HORVU3Hr1G063590.4 , HORVU3Hr1G063590.5 , HORVU3Hr1G063590.6 , HORVU1Hr1G083840.2 , HORVU1Hr1G083840.3 , HORVU1Hr1G083840.1 , HORVU1Hr1G083840.6 , HORVU1Hr1G083840.7 , HORVU1Hr1G083840.4 , HORVU1Hr1G083840.5 , HORVU1Hr1G083840.8 , HORVU1Hr1G083840.9 , HORVU1Hr1G083840.10 , HORVU1Hr1G083840.11 , HORVU1Hr1G083840.12 , HORVU1Hr1G083840.13 , HORVU1Hr1G083840.14 , HORVU1Hr1G083840.15 , HORVU1Hr1G083840.16 , HORVU1Hr1G083840.17
Wheat TraesCS1B02G400300 , TraesCS3A02G264700 , TraesCS3B02G298000 , TraesCS3B02G298000 , TraesCS3D02G264800 , TraesCS3D02G264800 , TraesCS1B02G400300 , TraesCS1A02G379000
Populus PNT16017 , PNT16019 , PNT24275 , PNT24274 , PNT16018


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cDNA sequences
Sobic.009G224400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
2 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
3 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
4 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
5 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
6 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
7 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
8 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
9 Sobic.002G262200 expressed protein -
10 Sobic.003G028200 expressed protein -
11 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
12 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma
13 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
14 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
15 Sobic.009G259200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
16 Sobic.007G023400 succinate dehydrogenase iron-sulfur subunit 2,mitochondrial precursor, putative, expressed K00235: SDHB, succinate dehydrogenase (ubiquinone) iron-sulfur subunit
17 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
18 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
19 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
20 Sobic.001G518500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase


Gene co-expression network
sample Sobic009G224400 Sobic009G224400 Sobic001G073600 Sobic001G073600 Sobic009G224400--Sobic001G073600 Sobic009G191400 Sobic009G191400 Sobic009G224400--Sobic009G191400 Sobic002G395000 Sobic002G395000 Sobic009G224400--Sobic002G395000 Sobic007G119600 Sobic007G119600 Sobic009G224400--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic009G224400--Sobic003G135600 Sobic001G458800 Sobic001G458800 Sobic009G224400--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic009G224400--Sobic004G155100 Sobic003G034900 Sobic003G034900 Sobic009G224400--Sobic003G034900 Sobic002G262200 Sobic002G262200 Sobic009G224400--Sobic002G262200 Sobic001G073600--Sobic009G191400 Sobic001G073600--Sobic009G224400 Sobic001G073600--Sobic003G135600 Sobic001G073600--Sobic002G395000 Sobic004G344800 Sobic004G344800 Sobic001G073600--Sobic004G344800 Sobic001G073600--Sobic007G119600 Sobic004G347600 Sobic004G347600 Sobic001G073600--Sobic004G347600 Sobic001G073600--Sobic001G458800 Sobic001G073600--Sobic004G155100 Sobic009G191400--Sobic001G073600 Sobic009G191400--Sobic009G224400 Sobic009G191400--Sobic004G347600 Sobic009G191400--Sobic007G119600 Sobic009G191400--Sobic003G135600 Sobic009G191400--Sobic004G344800 Sobic009G191400--Sobic002G262200 Sobic009G191400--Sobic001G458800 Sobic002G396700 Sobic002G396700 Sobic009G191400--Sobic002G396700 Sobic004G260200 Sobic004G260200 Sobic002G395000--Sobic004G260200 Sobic002G395000--Sobic003G135600 Sobic002G395000--Sobic009G224400 Sobic003G238500 Sobic003G238500 Sobic002G395000--Sobic003G238500 Sobic002G309700 Sobic002G309700 Sobic002G395000--Sobic002G309700 Sobic002G395000--Sobic001G073600 Sobic002G395000--Sobic004G155100 Sobic007G023400 Sobic007G023400 Sobic002G395000--Sobic007G023400 Sobic002G078300 Sobic002G078300 Sobic002G395000--Sobic002G078300 Sobic007G119600--Sobic009G224400 Sobic007G119600--Sobic009G191400 Sobic006G041800 Sobic006G041800 Sobic007G119600--Sobic006G041800 Sobic001G457000 Sobic001G457000 Sobic007G119600--Sobic001G457000 Sobic007G119600--Sobic001G073600 Sobic002G255400 Sobic002G255400 Sobic007G119600--Sobic002G255400 Sobic003G028200 Sobic003G028200 Sobic007G119600--Sobic003G028200 Sobic003G388700 Sobic003G388700 Sobic007G119600--Sobic003G388700 Sobic003G260600 Sobic003G260600 Sobic007G119600--Sobic003G260600 Sobic003G135600--Sobic004G155100 Sobic003G135600--Sobic002G395000 Sobic003G135600--Sobic001G073600 Sobic003G135600--Sobic009G224400 Sobic003G135600--Sobic002G309700 Sobic003G135600--Sobic009G191400 Sobic001G181500 Sobic001G181500 Sobic003G135600--Sobic001G181500 Sobic009G211900 Sobic009G211900 Sobic003G135600--Sobic009G211900 Sobic003G135600--Sobic004G260200 Sobic001G458800--Sobic003G034900 Sobic001G458800--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic001G458800--Sobic006G058900 Sobic001G115700 Sobic001G115700 Sobic001G458800--Sobic001G115700 Sobic007G171500 Sobic007G171500 Sobic001G458800--Sobic007G171500 Sobic001G458800--Sobic001G073600 Sobic002G186300 Sobic002G186300 Sobic001G458800--Sobic002G186300 Sobic001G458800--Sobic002G395000 Sobic001G031900 Sobic001G031900 Sobic001G458800--Sobic001G031900 Sobic004G155100--Sobic003G135600 Sobic004G155100--Sobic002G309700 Sobic004G155100--Sobic002G395000 Sobic004G155100--Sobic009G224400 Sobic004G155100--Sobic004G260200 Sobic004G155100--Sobic001G073600 Sobic009G240700 Sobic009G240700 Sobic004G155100--Sobic009G240700 Sobic001G206700 Sobic001G206700 Sobic004G155100--Sobic001G206700 Sobic002G180300 Sobic002G180300 Sobic004G155100--Sobic002G180300 Sobic003G034900--Sobic001G458800 Sobic001G465400 Sobic001G465400 Sobic003G034900--Sobic001G465400 Sobic004G093600 Sobic004G093600 Sobic003G034900--Sobic004G093600 Sobic003G034900--Sobic001G115700 Sobic001G047600 Sobic001G047600 Sobic003G034900--Sobic001G047600 Sobic003G034900--Sobic007G171500 Sobic003G034900--Sobic009G224400 Sobic003G034900--Sobic004G347600 Sobic003G034900--Sobic001G457000 Sobic004G159000 Sobic004G159000 Sobic002G262200--Sobic004G159000 Sobic002G262200--Sobic009G224400 Sobic002G262200--Sobic002G395000 Sobic002G262200--Sobic003G135600 Sobic002G262200--Sobic004G344800 Sobic002G262200--Sobic001G073600 Sobic001G112400 Sobic001G112400 Sobic002G262200--Sobic001G112400 Sobic007G013900 Sobic007G013900 Sobic002G262200--Sobic007G013900 Sobic002G262200--Sobic009G191400
Octagon: transcription factors


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