Gene annotation
Transcriptome id Sobic.007G184200.3,Sobic.007G184200.2
Synonym Sb07g025430
Functional annotation haloacid dehalogenase-like hydrolase family protein, putative, expressed
UniProt A0A1B6PIF9 , A0A1Z5RBH4
Pfam PF13242 PF13344
Panther DB PTHR19288 PTHR19288:SF3
NCBI CDD KOG3040; Predicted sugar phosphatase (HAD superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G10460 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os08g42950.1 : haloacid dehalogenase-like hydrolase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a005344
Brachypodium -
Barley -
Wheat TraesCS7A02G265900 , TraesCS7B02G166500 , TraesCS7D02G268800
Populus -


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cDNA sequences
Sobic.007G184200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
2 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7
3 Sobic.003G237400 plastidic ATP/ADP-transporter, putative, expressed K03301: ATP:ADP antiporter, AAA family
4 Sobic.003G167000 protein phosphotase protein, putative, expressed -
5 Sobic.008G102600 expressed protein -
6 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
7 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
8 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
9 Sobic.008G118400 kelch repeat protein, putative, expressed -
10 Sobic.001G518500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
11 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
12 Sobic.009G206600 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
13 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
14 Sobic.003G113400 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
15 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
16 Sobic.003G340700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
17 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
18 Sobic.002G262200 expressed protein -
19 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
20 Sobic.010G028400 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase


Gene co-expression network
sample Sobic007G184200 Sobic007G184200 Sobic004G039400 Sobic004G039400 Sobic007G184200--Sobic004G039400 Sobic009G112900 Sobic009G112900 Sobic007G184200--Sobic009G112900 Sobic003G237400 Sobic003G237400 Sobic007G184200--Sobic003G237400 Sobic003G167000 Sobic003G167000 Sobic007G184200--Sobic003G167000 Sobic008G102600 Sobic008G102600 Sobic007G184200--Sobic008G102600 Sobic008G018300 Sobic008G018300 Sobic007G184200--Sobic008G018300 Sobic001G378200 Sobic001G378200 Sobic007G184200--Sobic001G378200 Sobic001G013200 Sobic001G013200 Sobic007G184200--Sobic001G013200 Sobic008G118400 Sobic008G118400 Sobic007G184200--Sobic008G118400 Sobic001G008100 Sobic001G008100 Sobic004G039400--Sobic001G008100 Sobic001G073600 Sobic001G073600 Sobic004G039400--Sobic001G073600 Sobic010G040900 Sobic010G040900 Sobic004G039400--Sobic010G040900 Sobic001G443200 Sobic001G443200 Sobic004G039400--Sobic001G443200 Sobic002G262200 Sobic002G262200 Sobic004G039400--Sobic002G262200 Sobic009G191400 Sobic009G191400 Sobic004G039400--Sobic009G191400 Sobic004G344800 Sobic004G344800 Sobic004G039400--Sobic004G344800 Sobic001G387200 Sobic001G387200 Sobic004G039400--Sobic001G387200 Sobic002G079700 Sobic002G079700 Sobic004G039400--Sobic002G079700 Sobic009G112900--Sobic008G102600 Sobic001G518500 Sobic001G518500 Sobic009G112900--Sobic001G518500 Sobic001G060300 Sobic001G060300 Sobic009G112900--Sobic001G060300 Sobic009G112900--Sobic002G262200 Sobic008G175100 Sobic008G175100 Sobic009G112900--Sobic008G175100 Sobic004G159000 Sobic004G159000 Sobic009G112900--Sobic004G159000 Sobic003G196600 Sobic003G196600 Sobic009G112900--Sobic003G196600 Sobic001G342200 Sobic001G342200 Sobic009G112900--Sobic001G342200 Sobic010G007400 Sobic010G007400 Sobic009G112900--Sobic010G007400 Sobic001G031900 Sobic001G031900 Sobic003G237400--Sobic001G031900 Sobic003G237400--Sobic004G159000 Sobic007G191600 Sobic007G191600 Sobic003G237400--Sobic007G191600 Sobic003G237400--Sobic001G342200 Sobic009G224400 Sobic009G224400 Sobic003G237400--Sobic009G224400 Sobic003G237400--Sobic009G112900 Sobic003G261100 Sobic003G261100 Sobic003G237400--Sobic003G261100 Sobic003G237400--Sobic004G344800 Sobic007G013900 Sobic007G013900 Sobic003G237400--Sobic007G013900 Sobic007G048700 Sobic007G048700 Sobic003G167000--Sobic007G048700 Sobic001G347700 Sobic001G347700 Sobic003G167000--Sobic001G347700 Sobic003G167000--Sobic001G013200 Sobic007G003100 Sobic007G003100 Sobic003G167000--Sobic007G003100 Sobic009G218000 Sobic009G218000 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G113400 Sobic003G113400 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic006G153200 Sobic006G153200 Sobic003G167000--Sobic006G153200 Sobic008G102600--Sobic001G443200 Sobic008G102600--Sobic009G112900 Sobic003G196200 Sobic003G196200 Sobic008G102600--Sobic003G196200 Sobic004G000100 Sobic004G000100 Sobic008G102600--Sobic004G000100 Sobic004G045300 Sobic004G045300 Sobic008G102600--Sobic004G045300 Sobic008G110500 Sobic008G110500 Sobic008G102600--Sobic008G110500 Sobic001G387800 Sobic001G387800 Sobic008G102600--Sobic001G387800 Sobic001G112400 Sobic001G112400 Sobic008G102600--Sobic001G112400 Sobic008G102600--Sobic004G039400 Sobic002G255400 Sobic002G255400 Sobic008G018300--Sobic002G255400 Sobic002G352200 Sobic002G352200 Sobic008G018300--Sobic002G352200 Sobic008G018300--Sobic001G387200 Sobic004G173700 Sobic004G173700 Sobic008G018300--Sobic004G173700 Sobic002G420600 Sobic002G420600 Sobic008G018300--Sobic002G420600 Sobic003G260600 Sobic003G260600 Sobic008G018300--Sobic003G260600 Sobic001G282200 Sobic001G282200 Sobic008G018300--Sobic001G282200 Sobic003G129900 Sobic003G129900 Sobic008G018300--Sobic003G129900 Sobic003G016300 Sobic003G016300 Sobic008G018300--Sobic003G016300 Sobic001G465400 Sobic001G465400 Sobic001G378200--Sobic001G465400 Sobic001G378200--Sobic001G112400 Sobic006G012700 Sobic006G012700 Sobic001G378200--Sobic006G012700 Sobic004G078700 Sobic004G078700 Sobic001G378200--Sobic004G078700 Sobic001G378200--Sobic004G039400 Sobic001G378200--Sobic001G443200 Sobic001G378200--Sobic001G008100 Sobic001G378200--Sobic002G262200 Sobic005G207400 Sobic005G207400 Sobic001G378200--Sobic005G207400 Sobic001G013200--Sobic003G167000 Sobic001G013200--Sobic007G048700 Sobic001G035400 Sobic001G035400 Sobic001G013200--Sobic001G035400 Sobic008G014300 Sobic008G014300 Sobic001G013200--Sobic008G014300 Sobic006G203900 Sobic006G203900 Sobic001G013200--Sobic006G203900 Sobic001G013200--Sobic009G112900 Sobic003G131300 Sobic003G131300 Sobic001G013200--Sobic003G131300 Sobic010G197900 Sobic010G197900 Sobic001G013200--Sobic010G197900 Sobic001G013200--Sobic007G003100 Sobic008G118400--Sobic007G184200 Sobic003G043800 Sobic003G043800 Sobic008G118400--Sobic003G043800 Sobic004G222600 Sobic004G222600 Sobic008G118400--Sobic004G222600 Sobic008G141800 Sobic008G141800 Sobic008G118400--Sobic008G141800 Sobic003G023500 Sobic003G023500 Sobic008G118400--Sobic003G023500 Sobic010G216000 Sobic010G216000 Sobic008G118400--Sobic010G216000 Sobic001G237500 Sobic001G237500 Sobic008G118400--Sobic001G237500 Sobic004G207900 Sobic004G207900 Sobic008G118400--Sobic004G207900 Sobic001G416600 Sobic001G416600 Sobic008G118400--Sobic001G416600
Octagon: transcription factors


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