Gene annotation
Transcriptome id Sobic.010G028400.1
Synonym Sb10g002580
Functional annotation peptide methionine sulfoxide reductase, putative, expressed
UniProt C5Z3R0
Pfam PF01625
Panther DB PTHR10173 PTHR10173:SF28
NCBI CDD KOG1635; Peptide methionine sulfoxide reductase
KEGG Orthology K07304; peptide-methionine (S)-S-oxide reductase
Gene Ontology GO:0008113; peptide-methionine (S)-S-oxide reductase activity GO:0016671oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor GO:0006979response to oxidative stress


Orthologs (automatic annotation)
TAIR AT2G18030 : Peptide methionine sulfoxide reductase family protein
RAP-DB (Rice) LOC_Os06g04650.1 : peptide methionine sulfoxide reductase, putative, expressed
MaizeGDB (Corn) Zm00025a050099
Brachypodium KQK19938
Barley HORVU7Hr1G018320.4 , HORVU7Hr1G018320.3
Wheat TraesCS7A02G081100 , TraesCS4A02G378100 , TraesCS7D02G074700
Populus -


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cDNA sequences
Sobic.010G028400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G343000 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
2 Sobic.001G347700 protein phosphotase protein, putative, expressed -
3 Sobic.003G167000 protein phosphotase protein, putative, expressed -
4 Sobic.007G208000 geranylgeranyl transferase type-2 subunit beta, putative, expressed K05956: geranylgeranyl transferase type-2 subunit beta
5 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
6 Sobic.007G201000 methyltransferase domain containing protein, expressed -
7 Sobic.004G017900 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
8 Sobic.001G188000 SAM-dependent methyltransferase, putative, expressed -
9 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
10 Sobic.008G018200 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
11 Sobic.003G404100 CBS domain-containing protein, putative, expressed -
12 Sobic.002G070300 expressed protein -
13 Sobic.004G296700 ethylene-responsive element-binding protein, putative, expressed -
14 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
15 Sobic.007G146600 conserved oligomeric Golgi complex component 3, putative, expressed -
16 Sobic.006G222500 expressed protein -
17 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
18 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
19 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
20 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -


Gene co-expression network
sample Sobic010G028400 Sobic010G028400 Sobic001G343000 Sobic001G343000 Sobic010G028400--Sobic001G343000 Sobic001G347700 Sobic001G347700 Sobic010G028400--Sobic001G347700 Sobic003G167000 Sobic003G167000 Sobic010G028400--Sobic003G167000 Sobic007G208000 Sobic007G208000 Sobic010G028400--Sobic007G208000 Sobic007G048700 Sobic007G048700 Sobic010G028400--Sobic007G048700 Sobic007G201000 Sobic007G201000 Sobic010G028400--Sobic007G201000 Sobic004G017900 Sobic004G017900 Sobic010G028400--Sobic004G017900 Sobic001G188000 Sobic001G188000 Sobic010G028400--Sobic001G188000 Sobic003G260600 Sobic003G260600 Sobic010G028400--Sobic003G260600 Sobic007G146600 Sobic007G146600 Sobic001G343000--Sobic007G146600 Sobic003G393200 Sobic003G393200 Sobic001G343000--Sobic003G393200 Sobic001G343000--Sobic007G048700 Sobic002G182000 Sobic002G182000 Sobic001G343000--Sobic002G182000 Sobic007G030100 Sobic007G030100 Sobic001G343000--Sobic007G030100 Sobic001G343000--Sobic010G028400 Sobic002G070300 Sobic002G070300 Sobic001G343000--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic001G343000--Sobic008G132200 Sobic001G012900 Sobic001G012900 Sobic001G343000--Sobic001G012900 Sobic001G347700--Sobic007G048700 Sobic001G347700--Sobic003G167000 Sobic001G352800 Sobic001G352800 Sobic001G347700--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic001G347700--Sobic001G485300 Sobic001G347700--Sobic003G260600 Sobic001G347700--Sobic010G028400 Sobic002G352200 Sobic002G352200 Sobic001G347700--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic001G347700--Sobic002G217500 Sobic004G040700 Sobic004G040700 Sobic001G347700--Sobic004G040700 Sobic003G167000--Sobic007G048700 Sobic003G167000--Sobic001G347700 Sobic001G013200 Sobic001G013200 Sobic003G167000--Sobic001G013200 Sobic007G003100 Sobic007G003100 Sobic003G167000--Sobic007G003100 Sobic009G218000 Sobic009G218000 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G113400 Sobic003G113400 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic006G153200 Sobic006G153200 Sobic003G167000--Sobic006G153200 Sobic004G060300 Sobic004G060300 Sobic007G208000--Sobic004G060300 Sobic010G192600 Sobic010G192600 Sobic007G208000--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic007G208000--Sobic008G018500 Sobic010G250000 Sobic010G250000 Sobic007G208000--Sobic010G250000 Sobic002G029300 Sobic002G029300 Sobic007G208000--Sobic002G029300 Sobic001G455000 Sobic001G455000 Sobic007G208000--Sobic001G455000 Sobic003G005900 Sobic003G005900 Sobic007G208000--Sobic003G005900 Sobic001G358500 Sobic001G358500 Sobic007G208000--Sobic001G358500 Sobic007G208000--Sobic010G028400 Sobic007G048700--Sobic003G167000 Sobic007G048700--Sobic002G070300 Sobic001G035400 Sobic001G035400 Sobic007G048700--Sobic001G035400 Sobic009G220000 Sobic009G220000 Sobic007G048700--Sobic009G220000 Sobic007G048700--Sobic007G003100 Sobic007G048700--Sobic001G347700 Sobic007G048700--Sobic008G132200 Sobic007G048700--Sobic001G343000 Sobic007G048700--Sobic001G013200 Sobic001G286100 Sobic001G286100 Sobic007G201000--Sobic001G286100 Sobic007G201000--Sobic003G167000 Sobic001G348000 Sobic001G348000 Sobic007G201000--Sobic001G348000 Sobic002G401700 Sobic002G401700 Sobic007G201000--Sobic002G401700 Sobic007G158900 Sobic007G158900 Sobic007G201000--Sobic007G158900 Sobic007G201000--Sobic001G347700 Sobic003G402900 Sobic003G402900 Sobic007G201000--Sobic003G402900 Sobic007G201000--Sobic001G343000 Sobic007G192100 Sobic007G192100 Sobic007G201000--Sobic007G192100 Sobic004G017900--Sobic003G260600 Sobic001G543400 Sobic001G543400 Sobic004G017900--Sobic001G543400 Sobic002G392400 Sobic002G392400 Sobic004G017900--Sobic002G392400 Sobic007G189100 Sobic007G189100 Sobic004G017900--Sobic007G189100 Sobic004G017900--Sobic008G132200 Sobic007G014700 Sobic007G014700 Sobic004G017900--Sobic007G014700 Sobic003G200000 Sobic003G200000 Sobic004G017900--Sobic003G200000 Sobic004G017900--Sobic002G070300 Sobic007G043700 Sobic007G043700 Sobic004G017900--Sobic007G043700 Sobic010G069500 Sobic010G069500 Sobic001G188000--Sobic010G069500 Sobic002G414800 Sobic002G414800 Sobic001G188000--Sobic002G414800 Sobic004G328100 Sobic004G328100 Sobic001G188000--Sobic004G328100 Sobic002G348400 Sobic002G348400 Sobic001G188000--Sobic002G348400 Sobic001G280500 Sobic001G280500 Sobic001G188000--Sobic001G280500 Sobic001G309200 Sobic001G309200 Sobic001G188000--Sobic001G309200 Sobic002G397900 Sobic002G397900 Sobic001G188000--Sobic002G397900 Sobic001G131900 Sobic001G131900 Sobic001G188000--Sobic001G131900 Sobic002G304500 Sobic002G304500 Sobic001G188000--Sobic002G304500 Sobic002G255400 Sobic002G255400 Sobic003G260600--Sobic002G255400 Sobic003G201500 Sobic003G201500 Sobic003G260600--Sobic003G201500 Sobic003G089100 Sobic003G089100 Sobic003G260600--Sobic003G089100 Sobic003G260600--Sobic008G132200 Sobic001G378800 Sobic001G378800 Sobic003G260600--Sobic001G378800 Sobic003G372200 Sobic003G372200 Sobic003G260600--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic003G260600--Sobic007G014700
Octagon: transcription factors


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