Gene annotation
Transcriptome id Sobic.007G146600.1
Synonym Sb07g022130
Functional annotation conserved oligomeric Golgi complex component 3, putative, expressed
UniProt C5YLR5
Pfam PF04136
Panther DB PTHR13302
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006886intracellular protein transport GO:0005801cis-Golgi network


Orthologs (automatic annotation)
TAIR AT1G73430 : sec34-like family protein
RAP-DB (Rice) LOC_Os08g34970.1 : conserved oligomeric Golgi complex component 3, putative, expressed
MaizeGDB (Corn) Zm00025a005784
Brachypodium PNT68222 , KQJ98519
Barley -
Wheat TraesCS7A02G285600 , TraesCS7B02G199900 , TraesCS7D02G282700 , TraesCS7D02G282700
Populus -


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cDNA sequences
Sobic.007G146600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
2 Sobic.001G343000 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
3 Sobic.006G222500 expressed protein -
4 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
5 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
6 Sobic.003G150900 protein transport protein-related, putative, expressed -
7 Sobic.003G393200 expressed protein -
8 Sobic.005G114800 protein transport protein, putative, expressed K14007: protein transport protein SEC24
9 Sobic.010G250000 60S ribosomal protein L8, putative, expressed -
10 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
11 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
13 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
14 Sobic.008G019532 - -
15 Sobic.005G087300 protein kinase family protein, putative, expressed -
16 Sobic.001G193100 expressed protein -
17 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -
18 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
19 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
20 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase


Gene co-expression network
sample Sobic007G146600 Sobic007G146600 Sobic007G148400 Sobic007G148400 Sobic007G146600--Sobic007G148400 Sobic001G343000 Sobic001G343000 Sobic007G146600--Sobic001G343000 Sobic006G222500 Sobic006G222500 Sobic007G146600--Sobic006G222500 Sobic009G063800 Sobic009G063800 Sobic007G146600--Sobic009G063800 Sobic002G182000 Sobic002G182000 Sobic007G146600--Sobic002G182000 Sobic003G150900 Sobic003G150900 Sobic007G146600--Sobic003G150900 Sobic003G393200 Sobic003G393200 Sobic007G146600--Sobic003G393200 Sobic005G114800 Sobic005G114800 Sobic007G146600--Sobic005G114800 Sobic010G250000 Sobic010G250000 Sobic007G146600--Sobic010G250000 Sobic007G218600 Sobic007G218600 Sobic007G148400--Sobic007G218600 Sobic003G308300 Sobic003G308300 Sobic007G148400--Sobic003G308300 Sobic007G148400--Sobic006G222500 Sobic009G186700 Sobic009G186700 Sobic007G148400--Sobic009G186700 Sobic001G050500 Sobic001G050500 Sobic007G148400--Sobic001G050500 Sobic007G148400--Sobic007G146600 Sobic003G255700 Sobic003G255700 Sobic007G148400--Sobic003G255700 Sobic001G305900 Sobic001G305900 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800 Sobic001G343000--Sobic007G146600 Sobic001G343000--Sobic003G393200 Sobic007G048700 Sobic007G048700 Sobic001G343000--Sobic007G048700 Sobic001G343000--Sobic002G182000 Sobic007G030100 Sobic007G030100 Sobic001G343000--Sobic007G030100 Sobic010G028400 Sobic010G028400 Sobic001G343000--Sobic010G028400 Sobic002G070300 Sobic002G070300 Sobic001G343000--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic001G343000--Sobic008G132200 Sobic001G012900 Sobic001G012900 Sobic001G343000--Sobic001G012900 Sobic006G222500--Sobic007G148400 Sobic004G186300 Sobic004G186300 Sobic006G222500--Sobic004G186300 Sobic006G222500--Sobic007G146600 Sobic003G404100 Sobic003G404100 Sobic006G222500--Sobic003G404100 Sobic003G270100 Sobic003G270100 Sobic006G222500--Sobic003G270100 Sobic006G222500--Sobic007G218600 Sobic001G193100 Sobic001G193100 Sobic006G222500--Sobic001G193100 Sobic002G419000 Sobic002G419000 Sobic006G222500--Sobic002G419000 Sobic006G222500--Sobic003G308300 Sobic009G063800--Sobic002G182000 Sobic009G063800--Sobic010G250000 Sobic009G063800--Sobic007G146600 Sobic001G309200 Sobic001G309200 Sobic009G063800--Sobic001G309200 Sobic002G322400 Sobic002G322400 Sobic009G063800--Sobic002G322400 Sobic010G018900 Sobic010G018900 Sobic009G063800--Sobic010G018900 Sobic001G203600 Sobic001G203600 Sobic009G063800--Sobic001G203600 Sobic002G348400 Sobic002G348400 Sobic009G063800--Sobic002G348400 Sobic008G072500 Sobic008G072500 Sobic009G063800--Sobic008G072500 Sobic002G182000--Sobic009G063800 Sobic002G399900 Sobic002G399900 Sobic002G182000--Sobic002G399900 Sobic002G182000--Sobic001G343000 Sobic002G182000--Sobic001G203600 Sobic002G182000--Sobic007G146600 Sobic003G130900 Sobic003G130900 Sobic002G182000--Sobic003G130900 Sobic002G066800 Sobic002G066800 Sobic002G182000--Sobic002G066800 Sobic010G172400 Sobic010G172400 Sobic002G182000--Sobic010G172400 Sobic003G113300 Sobic003G113300 Sobic002G182000--Sobic003G113300 Sobic003G150900--Sobic005G114800 Sobic009G166600 Sobic009G166600 Sobic003G150900--Sobic009G166600 Sobic001G005600 Sobic001G005600 Sobic003G150900--Sobic001G005600 Sobic006G139100 Sobic006G139100 Sobic003G150900--Sobic006G139100 Sobic001G042200 Sobic001G042200 Sobic003G150900--Sobic001G042200 Sobic003G150900--Sobic007G146600 Sobic008G021000 Sobic008G021000 Sobic003G150900--Sobic008G021000 Sobic010G077500 Sobic010G077500 Sobic003G150900--Sobic010G077500 Sobic009G160600 Sobic009G160600 Sobic003G150900--Sobic009G160600 Sobic003G190200 Sobic003G190200 Sobic003G393200--Sobic003G190200 Sobic005G123400 Sobic005G123400 Sobic003G393200--Sobic005G123400 Sobic001G051400 Sobic001G051400 Sobic003G393200--Sobic001G051400 Sobic006G237500 Sobic006G237500 Sobic003G393200--Sobic006G237500 Sobic003G393200--Sobic002G066800 Sobic005G087300 Sobic005G087300 Sobic003G393200--Sobic005G087300 Sobic001G043200 Sobic001G043200 Sobic003G393200--Sobic001G043200 Sobic003G393200--Sobic001G343000 Sobic009G059400 Sobic009G059400 Sobic003G393200--Sobic009G059400 Sobic005G114800--Sobic003G150900 Sobic005G114800--Sobic009G166600 Sobic005G110499 Sobic005G110499 Sobic005G114800--Sobic005G110499 Sobic001G393700 Sobic001G393700 Sobic005G114800--Sobic001G393700 Sobic001G474400 Sobic001G474400 Sobic005G114800--Sobic001G474400 Sobic001G103300 Sobic001G103300 Sobic005G114800--Sobic001G103300 Sobic003G394200 Sobic003G394200 Sobic005G114800--Sobic003G394200 Sobic001G445500 Sobic001G445500 Sobic005G114800--Sobic001G445500 Sobic006G224800 Sobic006G224800 Sobic005G114800--Sobic006G224800 Sobic010G250000--Sobic009G063800 Sobic003G194300 Sobic003G194300 Sobic010G250000--Sobic003G194300 Sobic003G023200 Sobic003G023200 Sobic010G250000--Sobic003G023200 Sobic010G250000--Sobic008G072500 Sobic010G192600 Sobic010G192600 Sobic010G250000--Sobic010G192600 Sobic006G041800 Sobic006G041800 Sobic010G250000--Sobic006G041800 Sobic010G250000--Sobic007G148400 Sobic001G286100 Sobic001G286100 Sobic010G250000--Sobic001G286100 Sobic010G250000--Sobic002G276800
Octagon: transcription factors


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