Gene annotation
Transcriptome id Sobic.007G117800.1
Synonym ACYB-1, CYB-1, Sb07g019370
Functional annotation cytochrome b561, putative, expressed
UniProt C5YKL7
Pfam PF03188
Panther DB PTHR10106 PTHR10106:SF21
NCBI CDD KOG1619; Cytochrome b
KEGG Orthology K08360; cytochrome b-561
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G38630 : cytochrome B561-1
RAP-DB (Rice) LOC_Os08g29520.1 : cytochrome b561, putative, expressed
MaizeGDB (Corn) Zm00025a006106
Brachypodium KQJ98104
Barley HORVU7Hr1G065590.2 , HORVU7Hr1G065590.1 , HORVU7Hr1G065590.6 , HORVU7Hr1G065590.7 , HORVU7Hr1G065590.4 , HORVU7Hr1G065590.5 , HORVU7Hr1G065590.3
Wheat TraesCS7B02G199100 , TraesCS7D02G286900 , TraesCS7D02G286900 , TraesCS7A02G292700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
2 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
3 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
4 Sobic.003G276100 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
5 Sobic.007G012900 50S ribosomal protein L19, chloroplast precursor, putative, expressed -
6 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
7 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
8 Sobic.003G200600 CBS domain containing membrane protein, putative, expressed -
9 Sobic.002G262200 expressed protein -
10 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
11 Sobic.006G207600 expressed protein -
12 Sobic.008G102600 expressed protein -
13 Sobic.008G110500 UDP-N-acetylglucosamine transferase subunit ALG13, putative, expressed K07432: beta-1,4-N-acetylglucosaminyltransferase
14 Sobic.003G121600 gb protein, putative, expressed -
15 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
16 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
17 Sobic.004G039300 phosphatidate cytidylyltransferase family protein, putative, expressed K00902: dolichol kinase
18 Sobic.004G282100 peptidase, putative, expressed K06013: STE24 endopeptidase
19 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
20 Sobic.006G095200 signal peptidase complex subunit 2, putative, expressed K12947: SPCS2, signal peptidase complex subunit 2


Gene co-expression network
sample Sobic007G117800 Sobic007G117800 Sobic003G148900 Sobic003G148900 Sobic007G117800--Sobic003G148900 Sobic001G443200 Sobic001G443200 Sobic007G117800--Sobic001G443200 Sobic002G401700 Sobic002G401700 Sobic007G117800--Sobic002G401700 Sobic003G276100 Sobic003G276100 Sobic007G117800--Sobic003G276100 Sobic007G012900 Sobic007G012900 Sobic007G117800--Sobic007G012900 Sobic005G184200 Sobic005G184200 Sobic007G117800--Sobic005G184200 Sobic004G159000 Sobic004G159000 Sobic007G117800--Sobic004G159000 Sobic003G200600 Sobic003G200600 Sobic007G117800--Sobic003G200600 Sobic002G262200 Sobic002G262200 Sobic007G117800--Sobic002G262200 Sobic003G148900--Sobic003G200600 Sobic003G148900--Sobic007G117800 Sobic002G027800 Sobic002G027800 Sobic003G148900--Sobic002G027800 Sobic003G148900--Sobic007G012900 Sobic008G110500 Sobic008G110500 Sobic003G148900--Sobic008G110500 Sobic002G423800 Sobic002G423800 Sobic003G148900--Sobic002G423800 Sobic001G421400 Sobic001G421400 Sobic003G148900--Sobic001G421400 Sobic003G128300 Sobic003G128300 Sobic003G148900--Sobic003G128300 Sobic003G224300 Sobic003G224300 Sobic003G148900--Sobic003G224300 Sobic008G102600 Sobic008G102600 Sobic001G443200--Sobic008G102600 Sobic004G000100 Sobic004G000100 Sobic001G443200--Sobic004G000100 Sobic004G039400 Sobic004G039400 Sobic001G443200--Sobic004G039400 Sobic001G112400 Sobic001G112400 Sobic001G443200--Sobic001G112400 Sobic004G344800 Sobic004G344800 Sobic001G443200--Sobic004G344800 Sobic002G141700 Sobic002G141700 Sobic001G443200--Sobic002G141700 Sobic010G040900 Sobic010G040900 Sobic001G443200--Sobic010G040900 Sobic001G073600 Sobic001G073600 Sobic001G443200--Sobic001G073600 Sobic001G443200--Sobic002G262200 Sobic010G007400 Sobic010G007400 Sobic002G401700--Sobic010G007400 Sobic002G401700--Sobic007G012900 Sobic002G401700--Sobic004G159000 Sobic002G401700--Sobic007G117800 Sobic001G050400 Sobic001G050400 Sobic002G401700--Sobic001G050400 Sobic003G116600 Sobic003G116600 Sobic002G401700--Sobic003G116600 Sobic008G108500 Sobic008G108500 Sobic002G401700--Sobic008G108500 Sobic002G276800 Sobic002G276800 Sobic002G401700--Sobic002G276800 Sobic001G378200 Sobic001G378200 Sobic002G401700--Sobic001G378200 Sobic003G276100--Sobic007G012900 Sobic006G041800 Sobic006G041800 Sobic003G276100--Sobic006G041800 Sobic001G008100 Sobic001G008100 Sobic003G276100--Sobic001G008100 Sobic007G119600 Sobic007G119600 Sobic003G276100--Sobic007G119600 Sobic003G276100--Sobic001G443200 Sobic009G191400 Sobic009G191400 Sobic003G276100--Sobic009G191400 Sobic001G387200 Sobic001G387200 Sobic003G276100--Sobic001G387200 Sobic001G178500 Sobic001G178500 Sobic003G276100--Sobic001G178500 Sobic003G276100--Sobic007G117800 Sobic001G181500 Sobic001G181500 Sobic007G012900--Sobic001G181500 Sobic007G012900--Sobic003G276100 Sobic007G012900--Sobic002G401700 Sobic007G012900--Sobic001G008100 Sobic007G012900--Sobic006G041800 Sobic007G012900--Sobic003G148900 Sobic003G135600 Sobic003G135600 Sobic007G012900--Sobic003G135600 Sobic007G012900--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic007G012900--Sobic002G079700 Sobic005G184200--Sobic001G112400 Sobic005G184200--Sobic003G116600 Sobic005G184200--Sobic001G443200 Sobic003G217100 Sobic003G217100 Sobic005G184200--Sobic003G217100 Sobic001G332300 Sobic001G332300 Sobic005G184200--Sobic001G332300 Sobic005G184200--Sobic004G344800 Sobic002G090700 Sobic002G090700 Sobic005G184200--Sobic002G090700 Sobic005G184200--Sobic001G378200 Sobic005G184200--Sobic008G110500 Sobic007G013900 Sobic007G013900 Sobic004G159000--Sobic007G013900 Sobic004G159000--Sobic004G344800 Sobic004G159000--Sobic002G262200 Sobic004G030000 Sobic004G030000 Sobic004G159000--Sobic004G030000 Sobic003G196600 Sobic003G196600 Sobic004G159000--Sobic003G196600 Sobic004G159000--Sobic002G090700 Sobic003G152900 Sobic003G152900 Sobic004G159000--Sobic003G152900 Sobic002G260200 Sobic002G260200 Sobic004G159000--Sobic002G260200 Sobic004G159000--Sobic010G007400 Sobic003G200600--Sobic003G148900 Sobic003G200600--Sobic001G421400 Sobic003G200600--Sobic007G117800 Sobic003G200600--Sobic002G401700 Sobic003G200600--Sobic001G112400 Sobic001G313500 Sobic001G313500 Sobic003G200600--Sobic001G313500 Sobic003G200600--Sobic007G012900 Sobic003G200600--Sobic001G378200 Sobic003G200600--Sobic005G184200 Sobic002G262200--Sobic004G159000 Sobic009G224400 Sobic009G224400 Sobic002G262200--Sobic009G224400 Sobic002G395000 Sobic002G395000 Sobic002G262200--Sobic002G395000 Sobic002G262200--Sobic003G135600 Sobic002G262200--Sobic004G344800 Sobic002G262200--Sobic001G073600 Sobic002G262200--Sobic001G112400 Sobic002G262200--Sobic007G013900 Sobic002G262200--Sobic009G191400
Octagon: transcription factors


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