Gene annotation
Transcriptome id Sobic.003G121600.1
Synonym Sb03g010300
Functional annotation gb protein, putative, expressed
UniProt C5XGH8
Pfam -
Panther DB PTHR34459 PTHR34459:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18250 : -
RAP-DB (Rice) LOC_Os01g15979.1 : gb protein, putative, expressed
MaizeGDB (Corn) Zm00025a035281
Brachypodium KQK03771
Barley -
Wheat TraesCS3D02G185800 , TraesCS3D02G185800
Populus -


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cDNA sequences
Sobic.003G121600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
2 Sobic.004G282100 peptidase, putative, expressed K06013: STE24 endopeptidase
3 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
4 Sobic.004G039300 phosphatidate cytidylyltransferase family protein, putative, expressed K00902: dolichol kinase
5 Sobic.010G260400 rpp14 family protein, expressed K03537: ribonuclease P/MRP protein subunit POP5
6 Sobic.002G093900 mRNA-decapping enzyme, putative, expressed K12611: mRNA-decapping enzyme 1B
7 Sobic.008G134900 translocon-associated protein beta domain containing protein, expressed K13250: translocon-associated protein subunit beta
8 Sobic.010G266300 translocon-associated protein subunit alpha precursor, putative, expressed K13249: translocon-associated protein subunit alpha
9 Sobic.009G070200 Der1-like family domain containing protein, expressed K13989: Derlin-2/3
10 Sobic.003G200600 CBS domain containing membrane protein, putative, expressed -
11 Sobic.001G458200 protein transport protein Sec61 subunit alpha, putative, expressed K10956: protein transport protein SEC61 subunit alpha
12 Sobic.006G095200 signal peptidase complex subunit 2, putative, expressed K12947: SPCS2, signal peptidase complex subunit 2
13 Sobic.008G162000 rhodanese-like domain containing protein, putative, expressed K01011: TST, MPST, thiosulfate/3-mercaptopyruvate sulfurtransferase
14 Sobic.008G058700 metal cation transporter, putative, expressed -
15 Sobic.002G419000 AGC_AGC_other_RS6K_like.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K04688: ribosomal protein S6 kinase beta
16 Sobic.001G511300 expressed protein -
17 Sobic.009G160200 prenylated rab acceptor, putative, expressed -
18 Sobic.010G178800 solute carrier family 35 member B1, putative, expressed K15275: solute carrier family 35 (UDP-galactose transporter), member B1
19 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
20 Sobic.007G012900 50S ribosomal protein L19, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic003G121600 Sobic003G121600 Sobic007G117800 Sobic007G117800 Sobic003G121600--Sobic007G117800 Sobic004G282100 Sobic004G282100 Sobic003G121600--Sobic004G282100 Sobic003G148900 Sobic003G148900 Sobic003G121600--Sobic003G148900 Sobic004G039300 Sobic004G039300 Sobic003G121600--Sobic004G039300 Sobic010G260400 Sobic010G260400 Sobic003G121600--Sobic010G260400 Sobic002G093900 Sobic002G093900 Sobic003G121600--Sobic002G093900 Sobic008G134900 Sobic008G134900 Sobic003G121600--Sobic008G134900 Sobic010G266300 Sobic010G266300 Sobic003G121600--Sobic010G266300 Sobic009G070200 Sobic009G070200 Sobic003G121600--Sobic009G070200 Sobic007G117800--Sobic003G148900 Sobic001G443200 Sobic001G443200 Sobic007G117800--Sobic001G443200 Sobic002G401700 Sobic002G401700 Sobic007G117800--Sobic002G401700 Sobic003G276100 Sobic003G276100 Sobic007G117800--Sobic003G276100 Sobic007G012900 Sobic007G012900 Sobic007G117800--Sobic007G012900 Sobic005G184200 Sobic005G184200 Sobic007G117800--Sobic005G184200 Sobic004G159000 Sobic004G159000 Sobic007G117800--Sobic004G159000 Sobic003G200600 Sobic003G200600 Sobic007G117800--Sobic003G200600 Sobic002G262200 Sobic002G262200 Sobic007G117800--Sobic002G262200 Sobic006G139100 Sobic006G139100 Sobic004G282100--Sobic006G139100 Sobic004G282100--Sobic003G121600 Sobic004G282100--Sobic007G117800 Sobic004G154300 Sobic004G154300 Sobic004G282100--Sobic004G154300 Sobic004G282100--Sobic003G148900 Sobic008G162000 Sobic008G162000 Sobic004G282100--Sobic008G162000 Sobic001G458200 Sobic001G458200 Sobic004G282100--Sobic001G458200 Sobic006G095200 Sobic006G095200 Sobic004G282100--Sobic006G095200 Sobic003G150900 Sobic003G150900 Sobic004G282100--Sobic003G150900 Sobic003G148900--Sobic003G200600 Sobic003G148900--Sobic007G117800 Sobic002G027800 Sobic002G027800 Sobic003G148900--Sobic002G027800 Sobic003G148900--Sobic007G012900 Sobic008G110500 Sobic008G110500 Sobic003G148900--Sobic008G110500 Sobic002G423800 Sobic002G423800 Sobic003G148900--Sobic002G423800 Sobic001G421400 Sobic001G421400 Sobic003G148900--Sobic001G421400 Sobic003G128300 Sobic003G128300 Sobic003G148900--Sobic003G128300 Sobic003G224300 Sobic003G224300 Sobic003G148900--Sobic003G224300 Sobic001G085900 Sobic001G085900 Sobic004G039300--Sobic001G085900 Sobic001G313500 Sobic001G313500 Sobic004G039300--Sobic001G313500 Sobic004G039300--Sobic007G117800 Sobic010G026700 Sobic010G026700 Sobic004G039300--Sobic010G026700 Sobic003G033000 Sobic003G033000 Sobic004G039300--Sobic003G033000 Sobic004G039300--Sobic003G121600 Sobic001G122500 Sobic001G122500 Sobic004G039300--Sobic001G122500 Sobic001G311100 Sobic001G311100 Sobic004G039300--Sobic001G311100 Sobic002G261900 Sobic002G261900 Sobic004G039300--Sobic002G261900 Sobic010G260400--Sobic003G121600 Sobic009G187300 Sobic009G187300 Sobic010G260400--Sobic009G187300 Sobic010G260400--Sobic004G039300 Sobic006G239300 Sobic006G239300 Sobic010G260400--Sobic006G239300 Sobic010G260400--Sobic007G117800 Sobic010G260400--Sobic003G148900 Sobic010G260400--Sobic010G026700 Sobic009G160200 Sobic009G160200 Sobic010G260400--Sobic009G160200 Sobic004G353500 Sobic004G353500 Sobic010G260400--Sobic004G353500 Sobic002G093900--Sobic001G458200 Sobic001G428500 Sobic001G428500 Sobic002G093900--Sobic001G428500 Sobic002G093900--Sobic003G121600 Sobic002G093900--Sobic008G162000 Sobic002G093900--Sobic009G070200 Sobic003G192000 Sobic003G192000 Sobic002G093900--Sobic003G192000 Sobic003G416600 Sobic003G416600 Sobic002G093900--Sobic003G416600 Sobic001G050900 Sobic001G050900 Sobic002G093900--Sobic001G050900 Sobic007G140500 Sobic007G140500 Sobic002G093900--Sobic007G140500 Sobic008G134900--Sobic010G266300 Sobic008G134900--Sobic009G070200 Sobic001G066700 Sobic001G066700 Sobic008G134900--Sobic001G066700 Sobic007G152400 Sobic007G152400 Sobic008G134900--Sobic007G152400 Sobic008G134900--Sobic001G458200 Sobic004G204800 Sobic004G204800 Sobic008G134900--Sobic004G204800 Sobic009G122100 Sobic009G122100 Sobic008G134900--Sobic009G122100 Sobic009G077400 Sobic009G077400 Sobic008G134900--Sobic009G077400 Sobic003G382900 Sobic003G382900 Sobic008G134900--Sobic003G382900 Sobic010G266300--Sobic008G134900 Sobic010G266300--Sobic009G070200 Sobic010G266300--Sobic001G066700 Sobic003G233500 Sobic003G233500 Sobic010G266300--Sobic003G233500 Sobic010G008800 Sobic010G008800 Sobic010G266300--Sobic010G008800 Sobic010G266300--Sobic007G152400 Sobic005G111100 Sobic005G111100 Sobic010G266300--Sobic005G111100 Sobic001G224400 Sobic001G224400 Sobic010G266300--Sobic001G224400 Sobic010G266300--Sobic004G204800 Sobic009G070200--Sobic010G266300 Sobic009G070200--Sobic001G066700 Sobic002G044000 Sobic002G044000 Sobic009G070200--Sobic002G044000 Sobic009G070200--Sobic008G134900 Sobic009G070200--Sobic002G261900 Sobic003G358300 Sobic003G358300 Sobic009G070200--Sobic003G358300 Sobic009G120100 Sobic009G120100 Sobic009G070200--Sobic009G120100 Sobic003G043400 Sobic003G043400 Sobic009G070200--Sobic003G043400 Sobic009G070200--Sobic007G152400
Octagon: transcription factors


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