Gene annotation
Transcriptome id Sobic.004G039300.1,Sobic.004G039300.2
Synonym Sb04g003380
Functional annotation phosphatidate cytidylyltransferase family protein, putative, expressed
UniProt C5XUM1 , A0A1Z5RLW5
Pfam -
Panther DB PTHR13205 PTHR13205:SF15
NCBI CDD KOG2468; Dolichol kinase
KEGG Orthology K00902; dolichol kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G45040 : phosphatidate cytidylyltransferase family protein
RAP-DB (Rice) LOC_Os02g05320.1 : phosphatidate cytidylyltransferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a018967
Brachypodium KQJ93298
Barley HORVU6Hr1G020860.8 , HORVU6Hr1G020860.9 , HORVU6Hr1G020860.4 , HORVU6Hr1G020860.5 , HORVU6Hr1G020860.6 , HORVU6Hr1G020860.7 , HORVU6Hr1G020860.1 , HORVU6Hr1G020860.2 , HORVU6Hr1G020860.3 , HORVU6Hr1G020860.14 , HORVU6Hr1G020860.12 , HORVU6Hr1G020860.13 , HORVU6Hr1G020860.11
Wheat TraesCS6D02G104800 , TraesCS6A02G116000 , TraesCS6B02G143800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G085900 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
2 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
3 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
4 Sobic.010G026700 cornichon protein, putative, expressed -
5 Sobic.003G033000 DIRP family protein, putative, expressed -
6 Sobic.003G121600 gb protein, putative, expressed -
7 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
8 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
9 Sobic.002G261900 arabinogalactan protein, putative, expressed -
10 Sobic.002G419000 AGC_AGC_other_RS6K_like.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K04688: ribosomal protein S6 kinase beta
11 Sobic.001G214200 lysM domain containing protein, putative, expressed -
12 Sobic.009G070200 Der1-like family domain containing protein, expressed K13989: Derlin-2/3
13 Sobic.004G282100 peptidase, putative, expressed K06013: STE24 endopeptidase
14 Sobic.008G140400 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
15 Sobic.003G382900 signal recognition particle 72 kDa protein, putative, expressed K03108: signal recognition particle subunit SRP72
16 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
17 Sobic.010G260400 rpp14 family protein, expressed K03537: ribonuclease P/MRP protein subunit POP5
18 Sobic.009G160200 prenylated rab acceptor, putative, expressed -
19 Sobic.001G421400 expressed protein -
20 Sobic.008G134900 translocon-associated protein beta domain containing protein, expressed K13250: translocon-associated protein subunit beta


Gene co-expression network
sample Sobic004G039300 Sobic004G039300 Sobic001G085900 Sobic001G085900 Sobic004G039300--Sobic001G085900 Sobic001G313500 Sobic001G313500 Sobic004G039300--Sobic001G313500 Sobic007G117800 Sobic007G117800 Sobic004G039300--Sobic007G117800 Sobic010G026700 Sobic010G026700 Sobic004G039300--Sobic010G026700 Sobic003G033000 Sobic003G033000 Sobic004G039300--Sobic003G033000 Sobic003G121600 Sobic003G121600 Sobic004G039300--Sobic003G121600 Sobic001G122500 Sobic001G122500 Sobic004G039300--Sobic001G122500 Sobic001G311100 Sobic001G311100 Sobic004G039300--Sobic001G311100 Sobic002G261900 Sobic002G261900 Sobic004G039300--Sobic002G261900 Sobic001G085900--Sobic004G039300 Sobic001G085900--Sobic001G313500 Sobic001G158500 Sobic001G158500 Sobic001G085900--Sobic001G158500 Sobic002G083266 Sobic002G083266 Sobic001G085900--Sobic002G083266 Sobic002G385900 Sobic002G385900 Sobic001G085900--Sobic002G385900 Sobic010G129600 Sobic010G129600 Sobic001G085900--Sobic010G129600 Sobic001G298300 Sobic001G298300 Sobic001G085900--Sobic001G298300 Sobic007G006700 Sobic007G006700 Sobic001G085900--Sobic007G006700 Sobic003G061900 Sobic003G061900 Sobic001G085900--Sobic003G061900 Sobic001G421400 Sobic001G421400 Sobic001G313500--Sobic001G421400 Sobic001G512400 Sobic001G512400 Sobic001G313500--Sobic001G512400 Sobic001G313500--Sobic001G085900 Sobic001G313500--Sobic002G385900 Sobic001G161900 Sobic001G161900 Sobic001G313500--Sobic001G161900 Sobic001G313500--Sobic010G129600 Sobic009G135600 Sobic009G135600 Sobic001G313500--Sobic009G135600 Sobic010G261600 Sobic010G261600 Sobic001G313500--Sobic010G261600 Sobic001G313500--Sobic004G039300 Sobic003G148900 Sobic003G148900 Sobic007G117800--Sobic003G148900 Sobic001G443200 Sobic001G443200 Sobic007G117800--Sobic001G443200 Sobic002G401700 Sobic002G401700 Sobic007G117800--Sobic002G401700 Sobic003G276100 Sobic003G276100 Sobic007G117800--Sobic003G276100 Sobic007G012900 Sobic007G012900 Sobic007G117800--Sobic007G012900 Sobic005G184200 Sobic005G184200 Sobic007G117800--Sobic005G184200 Sobic004G159000 Sobic004G159000 Sobic007G117800--Sobic004G159000 Sobic003G200600 Sobic003G200600 Sobic007G117800--Sobic003G200600 Sobic002G262200 Sobic002G262200 Sobic007G117800--Sobic002G262200 Sobic003G104700 Sobic003G104700 Sobic010G026700--Sobic003G104700 Sobic001G214200 Sobic001G214200 Sobic010G026700--Sobic001G214200 Sobic010G026700--Sobic002G261900 Sobic010G026700--Sobic009G135600 Sobic010G026700--Sobic001G311100 Sobic003G023000 Sobic003G023000 Sobic010G026700--Sobic003G023000 Sobic003G141700 Sobic003G141700 Sobic010G026700--Sobic003G141700 Sobic007G139700 Sobic007G139700 Sobic010G026700--Sobic007G139700 Sobic003G349300 Sobic003G349300 Sobic010G026700--Sobic003G349300 Sobic003G033000--Sobic004G039300 Sobic008G140400 Sobic008G140400 Sobic003G033000--Sobic008G140400 Sobic004G101500 Sobic004G101500 Sobic003G033000--Sobic004G101500 Sobic009G179600 Sobic009G179600 Sobic003G033000--Sobic009G179600 Sobic003G346500 Sobic003G346500 Sobic003G033000--Sobic003G346500 Sobic002G419000 Sobic002G419000 Sobic003G033000--Sobic002G419000 Sobic003G289900 Sobic003G289900 Sobic003G033000--Sobic003G289900 Sobic006G222500 Sobic006G222500 Sobic003G033000--Sobic006G222500 Sobic003G033000--Sobic007G117800 Sobic003G121600--Sobic007G117800 Sobic004G282100 Sobic004G282100 Sobic003G121600--Sobic004G282100 Sobic003G121600--Sobic003G148900 Sobic003G121600--Sobic004G039300 Sobic010G260400 Sobic010G260400 Sobic003G121600--Sobic010G260400 Sobic002G093900 Sobic002G093900 Sobic003G121600--Sobic002G093900 Sobic008G134900 Sobic008G134900 Sobic003G121600--Sobic008G134900 Sobic010G266300 Sobic010G266300 Sobic003G121600--Sobic010G266300 Sobic009G070200 Sobic009G070200 Sobic003G121600--Sobic009G070200 Sobic006G217300 Sobic006G217300 Sobic001G122500--Sobic006G217300 Sobic001G122500--Sobic001G214200 Sobic004G350300 Sobic004G350300 Sobic001G122500--Sobic004G350300 Sobic006G263100 Sobic006G263100 Sobic001G122500--Sobic006G263100 Sobic010G188100 Sobic010G188100 Sobic001G122500--Sobic010G188100 Sobic003G002400 Sobic003G002400 Sobic001G122500--Sobic003G002400 Sobic001G122500--Sobic010G026700 Sobic001G409900 Sobic001G409900 Sobic001G122500--Sobic001G409900 Sobic002G214900 Sobic002G214900 Sobic001G122500--Sobic002G214900 Sobic001G311100--Sobic002G261900 Sobic010G094600 Sobic010G094600 Sobic001G311100--Sobic010G094600 Sobic009G160200 Sobic009G160200 Sobic001G311100--Sobic009G160200 Sobic003G043400 Sobic003G043400 Sobic001G311100--Sobic003G043400 Sobic001G311100--Sobic010G026700 Sobic001G283500 Sobic001G283500 Sobic001G311100--Sobic001G283500 Sobic001G311100--Sobic010G188100 Sobic010G017000 Sobic010G017000 Sobic001G311100--Sobic010G017000 Sobic001G311100--Sobic002G083266 Sobic006G062800 Sobic006G062800 Sobic002G261900--Sobic006G062800 Sobic007G059900 Sobic007G059900 Sobic002G261900--Sobic007G059900 Sobic002G261900--Sobic002G083266 Sobic002G261900--Sobic001G311100 Sobic001G066700 Sobic001G066700 Sobic002G261900--Sobic001G066700 Sobic002G261900--Sobic003G043400 Sobic010G204300 Sobic010G204300 Sobic002G261900--Sobic010G204300 Sobic002G261900--Sobic009G070200 Sobic004G026200 Sobic004G026200 Sobic002G261900--Sobic004G026200
Octagon: transcription factors


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