Gene annotation
Transcriptome id Sobic.010G260400.1
Synonym EMB1687, Sb10g029680
Functional annotation rpp14 family protein, expressed
UniProt C5Z9E5
Pfam PF01900
Panther DB PTHR10993
NCBI CDD KOG4639; RNase P/RNase MRP subunit POP5
KEGG Orthology K03537; ribonuclease P/MRP protein subunit POP5
Gene Ontology GO:0008033; tRNA processing GO:0004540ribonuclease activity


Orthologs (automatic annotation)
TAIR AT1G04635 : ribonuclease P family protein / Rpp14 family protein
RAP-DB (Rice) LOC_Os04g22870.1 : rpp14 family protein, expressed
MaizeGDB (Corn) Zm00025a033880
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G121600 gb protein, putative, expressed -
2 Sobic.009G187300 allyl alcohol dehydrogenase, putative, expressed -
3 Sobic.004G039300 phosphatidate cytidylyltransferase family protein, putative, expressed K00902: dolichol kinase
4 Sobic.006G239300 thiamine-repressible mitochondrial transport protein THI74, putative, expressed K15289: solute carrier family 35, member F5
5 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
6 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
7 Sobic.010G026700 cornichon protein, putative, expressed -
8 Sobic.009G160200 prenylated rab acceptor, putative, expressed -
9 Sobic.004G353500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
10 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
11 Sobic.009G070200 Der1-like family domain containing protein, expressed K13989: Derlin-2/3
12 Sobic.004G026200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
14 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
15 Sobic.003G224300 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
16 Sobic.009G191600 tesmin/TSO1-like CXC domain containing protein, expressed -
17 Sobic.010G262300 coiled-coil domain-containing protein 90A, mitochondrial precursor, putative, expressed -
18 Sobic.010G225300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
19 Sobic.003G227200 mitochondrial import receptor subunit TOM7-1, putative, expressed K17771: mitochondrial import receptor subunit TOM7
20 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3


Gene co-expression network
sample Sobic010G260400 Sobic010G260400 Sobic003G121600 Sobic003G121600 Sobic010G260400--Sobic003G121600 Sobic009G187300 Sobic009G187300 Sobic010G260400--Sobic009G187300 Sobic004G039300 Sobic004G039300 Sobic010G260400--Sobic004G039300 Sobic006G239300 Sobic006G239300 Sobic010G260400--Sobic006G239300 Sobic007G117800 Sobic007G117800 Sobic010G260400--Sobic007G117800 Sobic003G148900 Sobic003G148900 Sobic010G260400--Sobic003G148900 Sobic010G026700 Sobic010G026700 Sobic010G260400--Sobic010G026700 Sobic009G160200 Sobic009G160200 Sobic010G260400--Sobic009G160200 Sobic004G353500 Sobic004G353500 Sobic010G260400--Sobic004G353500 Sobic003G121600--Sobic007G117800 Sobic004G282100 Sobic004G282100 Sobic003G121600--Sobic004G282100 Sobic003G121600--Sobic003G148900 Sobic003G121600--Sobic004G039300 Sobic003G121600--Sobic010G260400 Sobic002G093900 Sobic002G093900 Sobic003G121600--Sobic002G093900 Sobic008G134900 Sobic008G134900 Sobic003G121600--Sobic008G134900 Sobic010G266300 Sobic010G266300 Sobic003G121600--Sobic010G266300 Sobic009G070200 Sobic009G070200 Sobic003G121600--Sobic009G070200 Sobic001G147100 Sobic001G147100 Sobic009G187300--Sobic001G147100 Sobic009G187300--Sobic010G260400 Sobic001G148700 Sobic001G148700 Sobic009G187300--Sobic001G148700 Sobic001G441000 Sobic001G441000 Sobic009G187300--Sobic001G441000 Sobic002G116200 Sobic002G116200 Sobic009G187300--Sobic002G116200 Sobic001G533300 Sobic001G533300 Sobic009G187300--Sobic001G533300 Sobic007G068000 Sobic007G068000 Sobic009G187300--Sobic007G068000 Sobic009G149800 Sobic009G149800 Sobic009G187300--Sobic009G149800 Sobic001G224400 Sobic001G224400 Sobic009G187300--Sobic001G224400 Sobic001G085900 Sobic001G085900 Sobic004G039300--Sobic001G085900 Sobic001G313500 Sobic001G313500 Sobic004G039300--Sobic001G313500 Sobic004G039300--Sobic007G117800 Sobic004G039300--Sobic010G026700 Sobic003G033000 Sobic003G033000 Sobic004G039300--Sobic003G033000 Sobic004G039300--Sobic003G121600 Sobic001G122500 Sobic001G122500 Sobic004G039300--Sobic001G122500 Sobic001G311100 Sobic001G311100 Sobic004G039300--Sobic001G311100 Sobic002G261900 Sobic002G261900 Sobic004G039300--Sobic002G261900 Sobic010G262300 Sobic010G262300 Sobic006G239300--Sobic010G262300 Sobic004G123000 Sobic004G123000 Sobic006G239300--Sobic004G123000 Sobic010G153100 Sobic010G153100 Sobic006G239300--Sobic010G153100 Sobic003G358300 Sobic003G358300 Sobic006G239300--Sobic003G358300 Sobic001G066700 Sobic001G066700 Sobic006G239300--Sobic001G066700 Sobic001G389900 Sobic001G389900 Sobic006G239300--Sobic001G389900 Sobic006G062800 Sobic006G062800 Sobic006G239300--Sobic006G062800 Sobic003G072300 Sobic003G072300 Sobic006G239300--Sobic003G072300 Sobic002G362000 Sobic002G362000 Sobic006G239300--Sobic002G362000 Sobic007G117800--Sobic003G148900 Sobic001G443200 Sobic001G443200 Sobic007G117800--Sobic001G443200 Sobic002G401700 Sobic002G401700 Sobic007G117800--Sobic002G401700 Sobic003G276100 Sobic003G276100 Sobic007G117800--Sobic003G276100 Sobic007G012900 Sobic007G012900 Sobic007G117800--Sobic007G012900 Sobic005G184200 Sobic005G184200 Sobic007G117800--Sobic005G184200 Sobic004G159000 Sobic004G159000 Sobic007G117800--Sobic004G159000 Sobic003G200600 Sobic003G200600 Sobic007G117800--Sobic003G200600 Sobic002G262200 Sobic002G262200 Sobic007G117800--Sobic002G262200 Sobic003G148900--Sobic003G200600 Sobic003G148900--Sobic007G117800 Sobic002G027800 Sobic002G027800 Sobic003G148900--Sobic002G027800 Sobic003G148900--Sobic007G012900 Sobic008G110500 Sobic008G110500 Sobic003G148900--Sobic008G110500 Sobic002G423800 Sobic002G423800 Sobic003G148900--Sobic002G423800 Sobic001G421400 Sobic001G421400 Sobic003G148900--Sobic001G421400 Sobic003G128300 Sobic003G128300 Sobic003G148900--Sobic003G128300 Sobic003G224300 Sobic003G224300 Sobic003G148900--Sobic003G224300 Sobic003G104700 Sobic003G104700 Sobic010G026700--Sobic003G104700 Sobic001G214200 Sobic001G214200 Sobic010G026700--Sobic001G214200 Sobic010G026700--Sobic002G261900 Sobic009G135600 Sobic009G135600 Sobic010G026700--Sobic009G135600 Sobic010G026700--Sobic001G311100 Sobic003G023000 Sobic003G023000 Sobic010G026700--Sobic003G023000 Sobic003G141700 Sobic003G141700 Sobic010G026700--Sobic003G141700 Sobic007G139700 Sobic007G139700 Sobic010G026700--Sobic007G139700 Sobic003G349300 Sobic003G349300 Sobic010G026700--Sobic003G349300 Sobic001G283500 Sobic001G283500 Sobic009G160200--Sobic001G283500 Sobic006G222400 Sobic006G222400 Sobic009G160200--Sobic006G222400 Sobic009G160200--Sobic001G311100 Sobic010G017000 Sobic010G017000 Sobic009G160200--Sobic010G017000 Sobic003G217100 Sobic003G217100 Sobic009G160200--Sobic003G217100 Sobic009G160200--Sobic002G261900 Sobic010G094600 Sobic010G094600 Sobic009G160200--Sobic010G094600 Sobic003G043400 Sobic003G043400 Sobic009G160200--Sobic003G043400 Sobic003G052400 Sobic003G052400 Sobic009G160200--Sobic003G052400 Sobic003G294900 Sobic003G294900 Sobic004G353500--Sobic003G294900 Sobic008G118300 Sobic008G118300 Sobic004G353500--Sobic008G118300 Sobic005G044300 Sobic005G044300 Sobic004G353500--Sobic005G044300 Sobic004G353500--Sobic007G012900 Sobic004G160800 Sobic004G160800 Sobic004G353500--Sobic004G160800 Sobic001G286100 Sobic001G286100 Sobic004G353500--Sobic001G286100 Sobic002G037600 Sobic002G037600 Sobic004G353500--Sobic002G037600 Sobic001G203800 Sobic001G203800 Sobic004G353500--Sobic001G203800 Sobic002G186500 Sobic002G186500 Sobic004G353500--Sobic002G186500
Octagon: transcription factors


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