Gene annotation
Transcriptome id Sobic.004G026200.1
Synonym Sb04g002320
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XTR2
Pfam -
Panther DB PTHR35998 PTHR35998:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32260 : -
RAP-DB (Rice) LOC_Os02g03560.1 : expressed protein
MaizeGDB (Corn) Zm00025a034973
Brachypodium KQJ93086
Barley -
Wheat TraesCS6A02G088100
Populus -


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cDNA sequences
Sobic.004G026200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
2 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
3 Sobic.002G261900 arabinogalactan protein, putative, expressed -
4 Sobic.002G196350 - K14011: UBXN6, UBX domain-containing protein 6
5 Sobic.004G284500 ORM1, putative, expressed -
6 Sobic.001G441000 erwinia induced protein 2, putative, expressed -
7 Sobic.006G131400 expressed protein -
8 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
9 Sobic.001G095300 prenylated rab acceptor, putative, expressed -
10 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
11 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
12 Sobic.004G259600 slowmo homolog, putative, expressed -
13 Sobic.006G263100 expressed protein -
14 Sobic.010G225300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
15 Sobic.002G280200 Skp1 family, dimerisation domain containing protein, expressed K03094: SKP1, S-phase kinase-associated protein 1
16 Sobic.003G368500 Yip1 domain containing protein, expressed -
17 Sobic.008G161000 protein kinase domain containing protein, expressed -
18 Sobic.006G182100 ORM1, putative, expressed -
19 Sobic.002G343500 CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.004G247200 erwinia induced protein 2, putative, expressed -


Gene co-expression network
sample Sobic004G026200 Sobic004G026200 Sobic010G213400 Sobic010G213400 Sobic004G026200--Sobic010G213400 Sobic006G062800 Sobic006G062800 Sobic004G026200--Sobic006G062800 Sobic002G261900 Sobic002G261900 Sobic004G026200--Sobic002G261900 Sobic002G196350 Sobic002G196350 Sobic004G026200--Sobic002G196350 Sobic004G284500 Sobic004G284500 Sobic004G026200--Sobic004G284500 Sobic001G441000 Sobic001G441000 Sobic004G026200--Sobic001G441000 Sobic006G131400 Sobic006G131400 Sobic004G026200--Sobic006G131400 Sobic001G283500 Sobic001G283500 Sobic004G026200--Sobic001G283500 Sobic001G095300 Sobic001G095300 Sobic004G026200--Sobic001G095300 Sobic003G368500 Sobic003G368500 Sobic010G213400--Sobic003G368500 Sobic003G249800 Sobic003G249800 Sobic010G213400--Sobic003G249800 Sobic009G033700 Sobic009G033700 Sobic010G213400--Sobic009G033700 Sobic010G213400--Sobic004G284500 Sobic010G163600 Sobic010G163600 Sobic010G213400--Sobic010G163600 Sobic001G224400 Sobic001G224400 Sobic010G213400--Sobic001G224400 Sobic010G213400--Sobic006G062800 Sobic001G445800 Sobic001G445800 Sobic010G213400--Sobic001G445800 Sobic010G153100 Sobic010G153100 Sobic010G213400--Sobic010G153100 Sobic006G062800--Sobic010G213400 Sobic006G062800--Sobic003G249800 Sobic003G285800 Sobic003G285800 Sobic006G062800--Sobic003G285800 Sobic007G059900 Sobic007G059900 Sobic006G062800--Sobic007G059900 Sobic009G129000 Sobic009G129000 Sobic006G062800--Sobic009G129000 Sobic002G218000 Sobic002G218000 Sobic006G062800--Sobic002G218000 Sobic002G202300 Sobic002G202300 Sobic006G062800--Sobic002G202300 Sobic006G062800--Sobic009G033700 Sobic006G062800--Sobic002G261900 Sobic002G261900--Sobic006G062800 Sobic002G261900--Sobic007G059900 Sobic002G083266 Sobic002G083266 Sobic002G261900--Sobic002G083266 Sobic001G311100 Sobic001G311100 Sobic002G261900--Sobic001G311100 Sobic001G066700 Sobic001G066700 Sobic002G261900--Sobic001G066700 Sobic003G043400 Sobic003G043400 Sobic002G261900--Sobic003G043400 Sobic010G204300 Sobic010G204300 Sobic002G261900--Sobic010G204300 Sobic009G070200 Sobic009G070200 Sobic002G261900--Sobic009G070200 Sobic002G261900--Sobic004G026200 Sobic002G196350--Sobic010G213400 Sobic002G196350--Sobic006G062800 Sobic002G196350--Sobic004G026200 Sobic003G063200 Sobic003G063200 Sobic002G196350--Sobic003G063200 Sobic005G028700 Sobic005G028700 Sobic002G196350--Sobic005G028700 Sobic008G185400 Sobic008G185400 Sobic002G196350--Sobic008G185400 Sobic002G196350--Sobic009G129000 Sobic002G046100 Sobic002G046100 Sobic002G196350--Sobic002G046100 Sobic002G196350--Sobic009G033700 Sobic004G284500--Sobic010G213400 Sobic006G182100 Sobic006G182100 Sobic004G284500--Sobic006G182100 Sobic009G111600 Sobic009G111600 Sobic004G284500--Sobic009G111600 Sobic002G153500 Sobic002G153500 Sobic004G284500--Sobic002G153500 Sobic004G272800 Sobic004G272800 Sobic004G284500--Sobic004G272800 Sobic004G284500--Sobic003G368500 Sobic004G284500--Sobic009G033700 Sobic004G284500--Sobic001G445800 Sobic001G281400 Sobic001G281400 Sobic004G284500--Sobic001G281400 Sobic001G441000--Sobic003G368500 Sobic009G171100 Sobic009G171100 Sobic001G441000--Sobic009G171100 Sobic007G091000 Sobic007G091000 Sobic001G441000--Sobic007G091000 Sobic004G247200 Sobic004G247200 Sobic001G441000--Sobic004G247200 Sobic001G441000--Sobic010G213400 Sobic001G533300 Sobic001G533300 Sobic001G441000--Sobic001G533300 Sobic001G441000--Sobic001G224400 Sobic010G217900 Sobic010G217900 Sobic001G441000--Sobic010G217900 Sobic001G441000--Sobic004G026200 Sobic001G516600 Sobic001G516600 Sobic006G131400--Sobic001G516600 Sobic003G094200 Sobic003G094200 Sobic006G131400--Sobic003G094200 Sobic002G343500 Sobic002G343500 Sobic006G131400--Sobic002G343500 Sobic006G131400--Sobic003G285800 Sobic006G131400--Sobic009G033700 Sobic004G318100 Sobic004G318100 Sobic006G131400--Sobic004G318100 Sobic006G131400--Sobic009G129000 Sobic001G107400 Sobic001G107400 Sobic006G131400--Sobic001G107400 Sobic004G036600 Sobic004G036600 Sobic006G131400--Sobic004G036600 Sobic008G016900 Sobic008G016900 Sobic001G283500--Sobic008G016900 Sobic007G195701 Sobic007G195701 Sobic001G283500--Sobic007G195701 Sobic001G403700 Sobic001G403700 Sobic001G283500--Sobic001G403700 Sobic003G115800 Sobic003G115800 Sobic001G283500--Sobic003G115800 Sobic009G160200 Sobic009G160200 Sobic001G283500--Sobic009G160200 Sobic001G283500--Sobic010G204300 Sobic002G296300 Sobic002G296300 Sobic001G283500--Sobic002G296300 Sobic010G062800 Sobic010G062800 Sobic001G283500--Sobic010G062800 Sobic010G188100 Sobic010G188100 Sobic001G283500--Sobic010G188100 Sobic010G204600 Sobic010G204600 Sobic001G095300--Sobic010G204600 Sobic002G140300 Sobic002G140300 Sobic001G095300--Sobic002G140300 Sobic003G092900 Sobic003G092900 Sobic001G095300--Sobic003G092900 Sobic003G324400 Sobic003G324400 Sobic001G095300--Sobic003G324400 Sobic002G405600 Sobic002G405600 Sobic001G095300--Sobic002G405600 Sobic001G538866 Sobic001G538866 Sobic001G095300--Sobic001G538866 Sobic002G245800 Sobic002G245800 Sobic001G095300--Sobic002G245800 Sobic001G095300--Sobic009G129000 Sobic006G179500 Sobic006G179500 Sobic001G095300--Sobic006G179500
Octagon: transcription factors


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