Gene annotation
Transcriptome id Sobic.002G196350.2,Sobic.002G196350.1
Synonym -
Functional annotation -
UniProt A0A1W0W4Y1
Pfam PF00789
Panther DB PTHR23153 PTHR23153:SF39
NCBI CDD -
KEGG Orthology K14011; UBXN6, UBX domain-containing protein 6
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G01650 : plant UBX domain-containing protein 2
RAP-DB (Rice) LOC_Os09g23690.1 : UBX domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013878 , Zm00025a046910
Brachypodium KQJ90168
Barley HORVU5Hr1G060790.5 , HORVU5Hr1G060790.4 , HORVU5Hr1G060790.1 , HORVU5Hr1G060790.3 , HORVU5Hr1G060790.2 , HORVU5Hr1G060790.6
Wheat TraesCS5A02G204800 , TraesCS5D02G211300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
2 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
3 Sobic.004G026200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
5 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
6 Sobic.008G185400 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
7 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
8 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
9 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
10 Sobic.003G023000 CID11, putative, expressed -
11 Sobic.004G284500 ORM1, putative, expressed -
12 Sobic.010G183201 - -
13 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
14 Sobic.010G086200 GRAM domain containing protein, expressed -
15 Sobic.007G198100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane protein, putative, expressed -
16 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
17 Sobic.003G104700 Rer1 protein, putative, expressed -
18 Sobic.001G095300 prenylated rab acceptor, putative, expressed -
19 Sobic.002G261900 arabinogalactan protein, putative, expressed -
20 Sobic.001G066700 GLTP domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G196350 Sobic002G196350 Sobic010G213400 Sobic010G213400 Sobic002G196350--Sobic010G213400 Sobic006G062800 Sobic006G062800 Sobic002G196350--Sobic006G062800 Sobic004G026200 Sobic004G026200 Sobic002G196350--Sobic004G026200 Sobic003G063200 Sobic003G063200 Sobic002G196350--Sobic003G063200 Sobic005G028700 Sobic005G028700 Sobic002G196350--Sobic005G028700 Sobic008G185400 Sobic008G185400 Sobic002G196350--Sobic008G185400 Sobic009G129000 Sobic009G129000 Sobic002G196350--Sobic009G129000 Sobic002G046100 Sobic002G046100 Sobic002G196350--Sobic002G046100 Sobic009G033700 Sobic009G033700 Sobic002G196350--Sobic009G033700 Sobic003G368500 Sobic003G368500 Sobic010G213400--Sobic003G368500 Sobic003G249800 Sobic003G249800 Sobic010G213400--Sobic003G249800 Sobic010G213400--Sobic009G033700 Sobic004G284500 Sobic004G284500 Sobic010G213400--Sobic004G284500 Sobic010G163600 Sobic010G163600 Sobic010G213400--Sobic010G163600 Sobic001G224400 Sobic001G224400 Sobic010G213400--Sobic001G224400 Sobic010G213400--Sobic006G062800 Sobic001G445800 Sobic001G445800 Sobic010G213400--Sobic001G445800 Sobic010G153100 Sobic010G153100 Sobic010G213400--Sobic010G153100 Sobic006G062800--Sobic010G213400 Sobic006G062800--Sobic003G249800 Sobic003G285800 Sobic003G285800 Sobic006G062800--Sobic003G285800 Sobic007G059900 Sobic007G059900 Sobic006G062800--Sobic007G059900 Sobic006G062800--Sobic009G129000 Sobic002G218000 Sobic002G218000 Sobic006G062800--Sobic002G218000 Sobic002G202300 Sobic002G202300 Sobic006G062800--Sobic002G202300 Sobic006G062800--Sobic009G033700 Sobic002G261900 Sobic002G261900 Sobic006G062800--Sobic002G261900 Sobic004G026200--Sobic010G213400 Sobic004G026200--Sobic006G062800 Sobic004G026200--Sobic002G261900 Sobic004G026200--Sobic002G196350 Sobic004G026200--Sobic004G284500 Sobic001G441000 Sobic001G441000 Sobic004G026200--Sobic001G441000 Sobic006G131400 Sobic006G131400 Sobic004G026200--Sobic006G131400 Sobic001G283500 Sobic001G283500 Sobic004G026200--Sobic001G283500 Sobic001G095300 Sobic001G095300 Sobic004G026200--Sobic001G095300 Sobic003G063200--Sobic005G028700 Sobic010G204600 Sobic010G204600 Sobic003G063200--Sobic010G204600 Sobic004G247200 Sobic004G247200 Sobic003G063200--Sobic004G247200 Sobic001G055600 Sobic001G055600 Sobic003G063200--Sobic001G055600 Sobic001G037000 Sobic001G037000 Sobic003G063200--Sobic001G037000 Sobic009G023200 Sobic009G023200 Sobic003G063200--Sobic009G023200 Sobic001G390300 Sobic001G390300 Sobic003G063200--Sobic001G390300 Sobic004G306300 Sobic004G306300 Sobic003G063200--Sobic004G306300 Sobic002G407900 Sobic002G407900 Sobic003G063200--Sobic002G407900 Sobic005G028700--Sobic003G063200 Sobic005G028700--Sobic009G129000 Sobic010G086200 Sobic010G086200 Sobic005G028700--Sobic010G086200 Sobic004G065500 Sobic004G065500 Sobic005G028700--Sobic004G065500 Sobic005G028700--Sobic004G247200 Sobic007G151100 Sobic007G151100 Sobic005G028700--Sobic007G151100 Sobic002G356101 Sobic002G356101 Sobic005G028700--Sobic002G356101 Sobic001G477300 Sobic001G477300 Sobic005G028700--Sobic001G477300 Sobic005G028700--Sobic004G306300 Sobic008G185400--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic008G185400--Sobic010G041600 Sobic008G185400--Sobic003G285800 Sobic006G143400 Sobic006G143400 Sobic008G185400--Sobic006G143400 Sobic001G034700 Sobic001G034700 Sobic008G185400--Sobic001G034700 Sobic004G272800 Sobic004G272800 Sobic008G185400--Sobic004G272800 Sobic002G187500 Sobic002G187500 Sobic008G185400--Sobic002G187500 Sobic002G190900 Sobic002G190900 Sobic008G185400--Sobic002G190900 Sobic001G281400 Sobic001G281400 Sobic008G185400--Sobic001G281400 Sobic009G129000--Sobic010G086200 Sobic009G129000--Sobic005G028700 Sobic009G183300 Sobic009G183300 Sobic009G129000--Sobic009G183300 Sobic009G129000--Sobic009G033700 Sobic009G200700 Sobic009G200700 Sobic009G129000--Sobic009G200700 Sobic009G129000--Sobic004G065500 Sobic010G217800 Sobic010G217800 Sobic009G129000--Sobic010G217800 Sobic006G267200 Sobic006G267200 Sobic009G129000--Sobic006G267200 Sobic009G129000--Sobic010G204600 Sobic002G046100--Sobic003G285800 Sobic002G046100--Sobic001G281400 Sobic002G345300 Sobic002G345300 Sobic002G046100--Sobic002G345300 Sobic002G046100--Sobic002G187500 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic002G046100--Sobic001G477300 Sobic002G267500 Sobic002G267500 Sobic002G046100--Sobic002G267500 Sobic002G046100--Sobic002G190900 Sobic009G033700--Sobic010G086200 Sobic003G037800 Sobic003G037800 Sobic009G033700--Sobic003G037800 Sobic009G033700--Sobic001G281400 Sobic009G033700--Sobic003G249800 Sobic007G198100 Sobic007G198100 Sobic009G033700--Sobic007G198100 Sobic009G033700--Sobic009G129000 Sobic002G245100 Sobic002G245100 Sobic009G033700--Sobic002G245100 Sobic009G143400 Sobic009G143400 Sobic009G033700--Sobic009G143400 Sobic009G033700--Sobic004G065500
Octagon: transcription factors


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