Gene annotation
Transcriptome id Sobic.010G183201.1
Synonym -
Functional annotation -
UniProt A0A1W0VTT2
Pfam -
Panther DB PTHR34189 PTHR34189:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
2 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
3 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
4 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -
5 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
6 Sobic.010G086200 GRAM domain containing protein, expressed -
7 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.005G103300 dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
9 Sobic.003G144900 expressed protein -
10 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
11 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
12 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
13 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
14 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
15 Sobic.003G037800 transferase family protein, putative, expressed -
16 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
17 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
18 Sobic.002G082600 DUF567 domain containing protein, putative, expressed -
19 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin


Gene co-expression network
sample Sobic010G183201 Sobic010G183201 Sobic009G129000 Sobic009G129000 Sobic010G183201--Sobic009G129000 Sobic009G183300 Sobic009G183300 Sobic010G183201--Sobic009G183300 Sobic003G285800 Sobic003G285800 Sobic010G183201--Sobic003G285800 Sobic001G477300 Sobic001G477300 Sobic010G183201--Sobic001G477300 Sobic005G028700 Sobic005G028700 Sobic010G183201--Sobic005G028700 Sobic010G086200 Sobic010G086200 Sobic010G183201--Sobic010G086200 Sobic010G217800 Sobic010G217800 Sobic010G183201--Sobic010G217800 Sobic005G103300 Sobic005G103300 Sobic010G183201--Sobic005G103300 Sobic003G144900 Sobic003G144900 Sobic010G183201--Sobic003G144900 Sobic009G129000--Sobic010G086200 Sobic009G129000--Sobic005G028700 Sobic009G129000--Sobic009G183300 Sobic009G033700 Sobic009G033700 Sobic009G129000--Sobic009G033700 Sobic009G200700 Sobic009G200700 Sobic009G129000--Sobic009G200700 Sobic004G065500 Sobic004G065500 Sobic009G129000--Sobic004G065500 Sobic009G129000--Sobic010G217800 Sobic006G267200 Sobic006G267200 Sobic009G129000--Sobic006G267200 Sobic010G204600 Sobic010G204600 Sobic009G129000--Sobic010G204600 Sobic009G183300--Sobic004G065500 Sobic003G387000 Sobic003G387000 Sobic009G183300--Sobic003G387000 Sobic009G183300--Sobic010G086200 Sobic007G107850 Sobic007G107850 Sobic009G183300--Sobic007G107850 Sobic009G183300--Sobic009G129000 Sobic006G231100 Sobic006G231100 Sobic009G183300--Sobic006G231100 Sobic009G183300--Sobic006G267200 Sobic006G231200 Sobic006G231200 Sobic009G183300--Sobic006G231200 Sobic008G177800 Sobic008G177800 Sobic009G183300--Sobic008G177800 Sobic002G046100 Sobic002G046100 Sobic003G285800--Sobic002G046100 Sobic002G187500 Sobic002G187500 Sobic003G285800--Sobic002G187500 Sobic010G178200 Sobic010G178200 Sobic003G285800--Sobic010G178200 Sobic003G350300 Sobic003G350300 Sobic003G285800--Sobic003G350300 Sobic002G345300 Sobic002G345300 Sobic003G285800--Sobic002G345300 Sobic003G285800--Sobic001G477300 Sobic001G281400 Sobic001G281400 Sobic003G285800--Sobic001G281400 Sobic003G285800--Sobic010G086200 Sobic003G285800--Sobic009G129000 Sobic001G124600 Sobic001G124600 Sobic001G477300--Sobic001G124600 Sobic004G187900 Sobic004G187900 Sobic001G477300--Sobic004G187900 Sobic001G477300--Sobic002G046100 Sobic001G308300 Sobic001G308300 Sobic001G477300--Sobic001G308300 Sobic001G477300--Sobic010G086200 Sobic001G477300--Sobic006G267200 Sobic001G477300--Sobic009G129000 Sobic009G159400 Sobic009G159400 Sobic001G477300--Sobic009G159400 Sobic001G477300--Sobic004G065500 Sobic003G063200 Sobic003G063200 Sobic005G028700--Sobic003G063200 Sobic005G028700--Sobic009G129000 Sobic005G028700--Sobic010G086200 Sobic005G028700--Sobic004G065500 Sobic004G247200 Sobic004G247200 Sobic005G028700--Sobic004G247200 Sobic007G151100 Sobic007G151100 Sobic005G028700--Sobic007G151100 Sobic002G356101 Sobic002G356101 Sobic005G028700--Sobic002G356101 Sobic005G028700--Sobic001G477300 Sobic004G306300 Sobic004G306300 Sobic005G028700--Sobic004G306300 Sobic010G086200--Sobic006G267200 Sobic010G086200--Sobic004G065500 Sobic004G321300 Sobic004G321300 Sobic010G086200--Sobic004G321300 Sobic009G141800 Sobic009G141800 Sobic010G086200--Sobic009G141800 Sobic010G086200--Sobic009G129000 Sobic009G143400 Sobic009G143400 Sobic010G086200--Sobic009G143400 Sobic001G459800 Sobic001G459800 Sobic010G086200--Sobic001G459800 Sobic010G086200--Sobic009G033700 Sobic003G393900 Sobic003G393900 Sobic010G086200--Sobic003G393900 Sobic002G415600 Sobic002G415600 Sobic010G217800--Sobic002G415600 Sobic006G230900 Sobic006G230900 Sobic010G217800--Sobic006G230900 Sobic003G144700 Sobic003G144700 Sobic010G217800--Sobic003G144700 Sobic003G123600 Sobic003G123600 Sobic010G217800--Sobic003G123600 Sobic010G217800--Sobic006G231200 Sobic010G217800--Sobic006G231100 Sobic010G217800--Sobic006G267200 Sobic010G220200 Sobic010G220200 Sobic010G217800--Sobic010G220200 Sobic010G217800--Sobic008G177800 Sobic002G414600 Sobic002G414600 Sobic005G103300--Sobic002G414600 Sobic005G103500 Sobic005G103500 Sobic005G103300--Sobic005G103500 Sobic003G334600 Sobic003G334600 Sobic005G103300--Sobic003G334600 Sobic005G103300--Sobic003G387000 Sobic001G252300 Sobic001G252300 Sobic005G103300--Sobic001G252300 Sobic001G097600 Sobic001G097600 Sobic005G103300--Sobic001G097600 Sobic001G119000 Sobic001G119000 Sobic005G103300--Sobic001G119000 Sobic002G082600 Sobic002G082600 Sobic005G103300--Sobic002G082600 Sobic002G359300 Sobic002G359300 Sobic005G103300--Sobic002G359300 Sobic003G144900--Sobic001G477300 Sobic004G171400 Sobic004G171400 Sobic003G144900--Sobic004G171400 Sobic001G367600 Sobic001G367600 Sobic003G144900--Sobic001G367600 Sobic002G192000 Sobic002G192000 Sobic003G144900--Sobic002G192000 Sobic003G144900--Sobic009G159400 Sobic009G023200 Sobic009G023200 Sobic003G144900--Sobic009G023200 Sobic001G481100 Sobic001G481100 Sobic003G144900--Sobic001G481100 Sobic007G074000 Sobic007G074000 Sobic003G144900--Sobic007G074000 Sobic003G393700 Sobic003G393700 Sobic003G144900--Sobic003G393700
Octagon: transcription factors


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