Gene annotation
Transcriptome id Sobic.003G144900.1
Synonym Sb03g012540
Functional annotation expressed protein
UniProt C5XI70
Pfam PF04667
Panther DB PTHR34804 PTHR34804:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16146 : cAMP-regulated phosphoprotein 19-related protein
RAP-DB (Rice) LOC_Os03g19220.2 : expressed protein
MaizeGDB (Corn) Zm00025a052581
Brachypodium KQK22029
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -
2 Sobic.004G171400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
5 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
6 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
7 Sobic.001G481100 DUF581 domain containing protein, expressed -
8 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
9 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
10 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
13 Sobic.004G259366 - -
14 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
15 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
16 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
17 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
18 Sobic.001G308300 expressed protein -
19 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.010G166500 amino acid transporter, putative, expressed -


Gene co-expression network
sample Sobic003G144900 Sobic003G144900 Sobic001G477300 Sobic001G477300 Sobic003G144900--Sobic001G477300 Sobic004G171400 Sobic004G171400 Sobic003G144900--Sobic004G171400 Sobic001G367600 Sobic001G367600 Sobic003G144900--Sobic001G367600 Sobic002G192000 Sobic002G192000 Sobic003G144900--Sobic002G192000 Sobic009G159400 Sobic009G159400 Sobic003G144900--Sobic009G159400 Sobic009G023200 Sobic009G023200 Sobic003G144900--Sobic009G023200 Sobic001G481100 Sobic001G481100 Sobic003G144900--Sobic001G481100 Sobic007G074000 Sobic007G074000 Sobic003G144900--Sobic007G074000 Sobic003G393700 Sobic003G393700 Sobic003G144900--Sobic003G393700 Sobic001G124600 Sobic001G124600 Sobic001G477300--Sobic001G124600 Sobic004G187900 Sobic004G187900 Sobic001G477300--Sobic004G187900 Sobic002G046100 Sobic002G046100 Sobic001G477300--Sobic002G046100 Sobic001G308300 Sobic001G308300 Sobic001G477300--Sobic001G308300 Sobic010G086200 Sobic010G086200 Sobic001G477300--Sobic010G086200 Sobic006G267200 Sobic006G267200 Sobic001G477300--Sobic006G267200 Sobic009G129000 Sobic009G129000 Sobic001G477300--Sobic009G129000 Sobic001G477300--Sobic009G159400 Sobic004G065500 Sobic004G065500 Sobic001G477300--Sobic004G065500 Sobic005G011300 Sobic005G011300 Sobic004G171400--Sobic005G011300 Sobic003G393900 Sobic003G393900 Sobic004G171400--Sobic003G393900 Sobic004G141200 Sobic004G141200 Sobic004G171400--Sobic004G141200 Sobic001G140900 Sobic001G140900 Sobic004G171400--Sobic001G140900 Sobic004G100700 Sobic004G100700 Sobic004G171400--Sobic004G100700 Sobic003G228900 Sobic003G228900 Sobic004G171400--Sobic003G228900 Sobic001G459800 Sobic001G459800 Sobic004G171400--Sobic001G459800 Sobic002G188900 Sobic002G188900 Sobic004G171400--Sobic002G188900 Sobic003G369100 Sobic003G369100 Sobic004G171400--Sobic003G369100 Sobic001G367600--Sobic002G192000 Sobic001G367600--Sobic001G140900 Sobic001G038900 Sobic001G038900 Sobic001G367600--Sobic001G038900 Sobic001G231700 Sobic001G231700 Sobic001G367600--Sobic001G231700 Sobic002G017800 Sobic002G017800 Sobic001G367600--Sobic002G017800 Sobic001G367600--Sobic004G100700 Sobic006G103000 Sobic006G103000 Sobic001G367600--Sobic006G103000 Sobic002G055700 Sobic002G055700 Sobic001G367600--Sobic002G055700 Sobic002G353900 Sobic002G353900 Sobic001G367600--Sobic002G353900 Sobic001G018300 Sobic001G018300 Sobic002G192000--Sobic001G018300 Sobic002G192000--Sobic001G367600 Sobic001G231400 Sobic001G231400 Sobic002G192000--Sobic001G231400 Sobic004G243100 Sobic004G243100 Sobic002G192000--Sobic004G243100 Sobic006G158600 Sobic006G158600 Sobic002G192000--Sobic006G158600 Sobic001G318700 Sobic001G318700 Sobic002G192000--Sobic001G318700 Sobic002G192000--Sobic001G038900 Sobic002G140400 Sobic002G140400 Sobic002G192000--Sobic002G140400 Sobic001G423800 Sobic001G423800 Sobic002G192000--Sobic001G423800 Sobic009G159400--Sobic001G038900 Sobic001G435000 Sobic001G435000 Sobic009G159400--Sobic001G435000 Sobic004G321300 Sobic004G321300 Sobic009G159400--Sobic004G321300 Sobic003G345100 Sobic003G345100 Sobic009G159400--Sobic003G345100 Sobic004G208700 Sobic004G208700 Sobic009G159400--Sobic004G208700 Sobic009G159400--Sobic001G140900 Sobic008G050600 Sobic008G050600 Sobic009G159400--Sobic008G050600 Sobic010G259600 Sobic010G259600 Sobic009G159400--Sobic010G259600 Sobic004G237800 Sobic004G237800 Sobic009G159400--Sobic004G237800 Sobic009G023200--Sobic004G187900 Sobic010G204600 Sobic010G204600 Sobic009G023200--Sobic010G204600 Sobic003G063200 Sobic003G063200 Sobic009G023200--Sobic003G063200 Sobic001G067601 Sobic001G067601 Sobic009G023200--Sobic001G067601 Sobic009G023200--Sobic002G046100 Sobic002G245800 Sobic002G245800 Sobic009G023200--Sobic002G245800 Sobic003G181500 Sobic003G181500 Sobic009G023200--Sobic003G181500 Sobic003G202200 Sobic003G202200 Sobic009G023200--Sobic003G202200 Sobic005G196800 Sobic005G196800 Sobic009G023200--Sobic005G196800 Sobic001G481100--Sobic003G228900 Sobic006G075400 Sobic006G075400 Sobic001G481100--Sobic006G075400 Sobic001G481100--Sobic001G318700 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic001G481100--Sobic003G202200 Sobic001G079300 Sobic001G079300 Sobic001G481100--Sobic001G079300 Sobic004G301000 Sobic004G301000 Sobic001G481100--Sobic004G301000 Sobic002G251000 Sobic002G251000 Sobic001G481100--Sobic002G251000 Sobic007G074000--Sobic003G369100 Sobic007G074000--Sobic004G141200 Sobic007G074000--Sobic004G237800 Sobic007G074000--Sobic002G140400 Sobic007G074000--Sobic003G228900 Sobic002G336600 Sobic002G336600 Sobic007G074000--Sobic002G336600 Sobic003G364600 Sobic003G364600 Sobic007G074000--Sobic003G364600 Sobic001G138600 Sobic001G138600 Sobic007G074000--Sobic001G138600 Sobic009G247900 Sobic009G247900 Sobic007G074000--Sobic009G247900 Sobic009G077800 Sobic009G077800 Sobic003G393700--Sobic009G077800 Sobic001G070800 Sobic001G070800 Sobic003G393700--Sobic001G070800 Sobic009G234100 Sobic009G234100 Sobic003G393700--Sobic009G234100 Sobic009G139400 Sobic009G139400 Sobic003G393700--Sobic009G139400 Sobic003G393700--Sobic004G321300 Sobic003G297600 Sobic003G297600 Sobic003G393700--Sobic003G297600 Sobic002G393000 Sobic002G393000 Sobic003G393700--Sobic002G393000 Sobic004G061200 Sobic004G061200 Sobic003G393700--Sobic004G061200 Sobic001G177800 Sobic001G177800 Sobic003G393700--Sobic001G177800
Octagon: transcription factors


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