Gene annotation
Transcriptome id Sobic.001G441000.1
Synonym Sb01g041440
Functional annotation erwinia induced protein 2, putative, expressed
UniProt C5WRK5
Pfam PF05529
Panther DB PTHR12701 PTHR12701:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006886intracellular protein transport GO:0005783endoplasmic reticulum


Orthologs (automatic annotation)
TAIR AT1G48440 : B-cell receptor-associated 31-like
RAP-DB (Rice) LOC_Os03g13750.1 : erwinia induced protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a001508
Brachypodium -
Barley -
Wheat TraesCS4A02G072700 , TraesCS4D02G229700 , TraesCS4B02G228600 , TraesCS4B02G228600
Populus -


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cDNA sequences
Sobic.001G441000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G368500 Yip1 domain containing protein, expressed -
2 Sobic.009G171100 prenylated rab acceptor, putative, expressed -
3 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
4 Sobic.004G247200 erwinia induced protein 2, putative, expressed -
5 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
6 Sobic.001G533300 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
7 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
8 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
9 Sobic.004G026200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.007G195701 - -
11 Sobic.002G214900 polygalacturonase, putative, expressed -
12 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
13 Sobic.010G225300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
14 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
15 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
16 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
17 Sobic.001G148700 signal peptidase complex subunit 1, putative, expressed K12946: signal peptidase complex subunit 1
18 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
19 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
20 Sobic.003G141700 50S ribosomal protein L15, putative, expressed K02876: RP-L15, MRPL15, large subunit ribosomal protein L15


Gene co-expression network
sample Sobic001G441000 Sobic001G441000 Sobic003G368500 Sobic003G368500 Sobic001G441000--Sobic003G368500 Sobic009G171100 Sobic009G171100 Sobic001G441000--Sobic009G171100 Sobic007G091000 Sobic007G091000 Sobic001G441000--Sobic007G091000 Sobic004G247200 Sobic004G247200 Sobic001G441000--Sobic004G247200 Sobic010G213400 Sobic010G213400 Sobic001G441000--Sobic010G213400 Sobic001G533300 Sobic001G533300 Sobic001G441000--Sobic001G533300 Sobic001G224400 Sobic001G224400 Sobic001G441000--Sobic001G224400 Sobic010G217900 Sobic010G217900 Sobic001G441000--Sobic010G217900 Sobic004G026200 Sobic004G026200 Sobic001G441000--Sobic004G026200 Sobic003G368500--Sobic010G213400 Sobic010G018400 Sobic010G018400 Sobic003G368500--Sobic010G018400 Sobic003G368500--Sobic001G224400 Sobic003G155400 Sobic003G155400 Sobic003G368500--Sobic003G155400 Sobic004G310300 Sobic004G310300 Sobic003G368500--Sobic004G310300 Sobic004G284500 Sobic004G284500 Sobic003G368500--Sobic004G284500 Sobic005G188100 Sobic005G188100 Sobic003G368500--Sobic005G188100 Sobic007G051000 Sobic007G051000 Sobic003G368500--Sobic007G051000 Sobic001G418900 Sobic001G418900 Sobic003G368500--Sobic001G418900 Sobic001G525400 Sobic001G525400 Sobic009G171100--Sobic001G525400 Sobic009G171100--Sobic001G441000 Sobic003G253500 Sobic003G253500 Sobic009G171100--Sobic003G253500 Sobic004G259500 Sobic004G259500 Sobic009G171100--Sobic004G259500 Sobic001G408100 Sobic001G408100 Sobic009G171100--Sobic001G408100 Sobic007G188100 Sobic007G188100 Sobic009G171100--Sobic007G188100 Sobic002G353400 Sobic002G353400 Sobic009G171100--Sobic002G353400 Sobic003G392200 Sobic003G392200 Sobic009G171100--Sobic003G392200 Sobic009G182200 Sobic009G182200 Sobic009G171100--Sobic009G182200 Sobic002G078400 Sobic002G078400 Sobic007G091000--Sobic002G078400 Sobic003G362400 Sobic003G362400 Sobic007G091000--Sobic003G362400 Sobic001G128400 Sobic001G128400 Sobic007G091000--Sobic001G128400 Sobic005G111100 Sobic005G111100 Sobic007G091000--Sobic005G111100 Sobic007G152400 Sobic007G152400 Sobic007G091000--Sobic007G152400 Sobic003G305100 Sobic003G305100 Sobic007G091000--Sobic003G305100 Sobic007G091000--Sobic003G368500 Sobic001G025600 Sobic001G025600 Sobic007G091000--Sobic001G025600 Sobic003G277000 Sobic003G277000 Sobic007G091000--Sobic003G277000 Sobic003G063200 Sobic003G063200 Sobic004G247200--Sobic003G063200 Sobic005G028700 Sobic005G028700 Sobic004G247200--Sobic005G028700 Sobic004G259600 Sobic004G259600 Sobic004G247200--Sobic004G259600 Sobic001G055600 Sobic001G055600 Sobic004G247200--Sobic001G055600 Sobic010G204600 Sobic010G204600 Sobic004G247200--Sobic010G204600 Sobic004G065500 Sobic004G065500 Sobic004G247200--Sobic004G065500 Sobic009G183300 Sobic009G183300 Sobic004G247200--Sobic009G183300 Sobic001G067601 Sobic001G067601 Sobic004G247200--Sobic001G067601 Sobic002G348100 Sobic002G348100 Sobic004G247200--Sobic002G348100 Sobic010G213400--Sobic003G368500 Sobic003G249800 Sobic003G249800 Sobic010G213400--Sobic003G249800 Sobic009G033700 Sobic009G033700 Sobic010G213400--Sobic009G033700 Sobic010G213400--Sobic004G284500 Sobic010G163600 Sobic010G163600 Sobic010G213400--Sobic010G163600 Sobic010G213400--Sobic001G224400 Sobic006G062800 Sobic006G062800 Sobic010G213400--Sobic006G062800 Sobic001G445800 Sobic001G445800 Sobic010G213400--Sobic001G445800 Sobic010G153100 Sobic010G153100 Sobic010G213400--Sobic010G153100 Sobic001G533300--Sobic001G067601 Sobic002G222900 Sobic002G222900 Sobic001G533300--Sobic002G222900 Sobic001G533300--Sobic001G224400 Sobic001G533300--Sobic003G368500 Sobic001G533300--Sobic010G217900 Sobic001G308700 Sobic001G308700 Sobic001G533300--Sobic001G308700 Sobic008G189300 Sobic008G189300 Sobic001G533300--Sobic008G189300 Sobic006G010600 Sobic006G010600 Sobic001G533300--Sobic006G010600 Sobic010G225300 Sobic010G225300 Sobic001G533300--Sobic010G225300 Sobic001G224400--Sobic003G368500 Sobic001G224400--Sobic003G155400 Sobic002G153500 Sobic002G153500 Sobic001G224400--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic001G224400--Sobic010G154700 Sobic001G224400--Sobic010G213400 Sobic001G224400--Sobic008G189300 Sobic001G224400--Sobic010G153100 Sobic001G132100 Sobic001G132100 Sobic001G224400--Sobic001G132100 Sobic001G224400--Sobic002G222900 Sobic010G217900--Sobic001G067601 Sobic001G019900 Sobic001G019900 Sobic010G217900--Sobic001G019900 Sobic005G228000 Sobic005G228000 Sobic010G217900--Sobic005G228000 Sobic010G217900--Sobic001G533300 Sobic010G217900--Sobic004G247200 Sobic001G037000 Sobic001G037000 Sobic010G217900--Sobic001G037000 Sobic003G162700 Sobic003G162700 Sobic010G217900--Sobic003G162700 Sobic004G177700 Sobic004G177700 Sobic010G217900--Sobic004G177700 Sobic010G217900--Sobic005G028700 Sobic004G026200--Sobic010G213400 Sobic004G026200--Sobic006G062800 Sobic002G261900 Sobic002G261900 Sobic004G026200--Sobic002G261900 Sobic002G196350 Sobic002G196350 Sobic004G026200--Sobic002G196350 Sobic004G026200--Sobic004G284500 Sobic004G026200--Sobic001G441000 Sobic006G131400 Sobic006G131400 Sobic004G026200--Sobic006G131400 Sobic001G283500 Sobic001G283500 Sobic004G026200--Sobic001G283500 Sobic001G095300 Sobic001G095300 Sobic004G026200--Sobic001G095300
Octagon: transcription factors


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