Gene annotation
Transcriptome id Sobic.001G533300.1
Synonym Sb01g049640, TIM23-2, ATTIM23-2
Functional annotation mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
UniProt C5X123
Pfam PF02466
Panther DB PTHR15371 PTHR15371:SF6
NCBI CDD -
KEGG Orthology K17794; mitochondrial import inner membrane translocase subunit TIM23
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72750 : translocase inner membrane subunit 23-2
RAP-DB (Rice) LOC_Os03g02390.1 : mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
MaizeGDB (Corn) Zm00025a053527 , Zm00025a000208
Brachypodium KQK24015
Barley HORVU4Hr1G088870.1
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G533300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
2 Sobic.002G222900 transmembrane protein 50A, putative, expressed -
3 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
4 Sobic.003G368500 Yip1 domain containing protein, expressed -
5 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
6 Sobic.001G308700 ATG1, putative, expressed -
7 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
8 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
9 Sobic.010G225300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
10 Sobic.008G185400 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
11 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
12 Sobic.001G441000 erwinia induced protein 2, putative, expressed -
13 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
14 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
15 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
16 Sobic.003G277000 expressed protein -
17 Sobic.004G103700 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
18 Sobic.001G445800 expressed protein -
19 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
20 Sobic.007G134000 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon


Gene co-expression network
sample Sobic001G533300 Sobic001G533300 Sobic001G067601 Sobic001G067601 Sobic001G533300--Sobic001G067601 Sobic002G222900 Sobic002G222900 Sobic001G533300--Sobic002G222900 Sobic001G224400 Sobic001G224400 Sobic001G533300--Sobic001G224400 Sobic003G368500 Sobic003G368500 Sobic001G533300--Sobic003G368500 Sobic010G217900 Sobic010G217900 Sobic001G533300--Sobic010G217900 Sobic001G308700 Sobic001G308700 Sobic001G533300--Sobic001G308700 Sobic008G189300 Sobic008G189300 Sobic001G533300--Sobic008G189300 Sobic006G010600 Sobic006G010600 Sobic001G533300--Sobic006G010600 Sobic010G225300 Sobic010G225300 Sobic001G533300--Sobic010G225300 Sobic001G019900 Sobic001G019900 Sobic001G067601--Sobic001G019900 Sobic009G023200 Sobic009G023200 Sobic001G067601--Sobic009G023200 Sobic002G046100 Sobic002G046100 Sobic001G067601--Sobic002G046100 Sobic001G067601--Sobic010G217900 Sobic003G063200 Sobic003G063200 Sobic001G067601--Sobic003G063200 Sobic001G037000 Sobic001G037000 Sobic001G067601--Sobic001G037000 Sobic005G228000 Sobic005G228000 Sobic001G067601--Sobic005G228000 Sobic003G181500 Sobic003G181500 Sobic001G067601--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic001G067601--Sobic003G162700 Sobic003G155400 Sobic003G155400 Sobic002G222900--Sobic003G155400 Sobic002G222900--Sobic001G224400 Sobic007G134000 Sobic007G134000 Sobic002G222900--Sobic007G134000 Sobic010G154700 Sobic010G154700 Sobic002G222900--Sobic010G154700 Sobic007G068000 Sobic007G068000 Sobic002G222900--Sobic007G068000 Sobic002G222900--Sobic010G225300 Sobic001G459200 Sobic001G459200 Sobic002G222900--Sobic001G459200 Sobic001G128400 Sobic001G128400 Sobic002G222900--Sobic001G128400 Sobic007G051000 Sobic007G051000 Sobic002G222900--Sobic007G051000 Sobic001G224400--Sobic003G368500 Sobic001G224400--Sobic003G155400 Sobic002G153500 Sobic002G153500 Sobic001G224400--Sobic002G153500 Sobic001G224400--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic001G224400--Sobic010G213400 Sobic001G224400--Sobic008G189300 Sobic010G153100 Sobic010G153100 Sobic001G224400--Sobic010G153100 Sobic001G132100 Sobic001G132100 Sobic001G224400--Sobic001G132100 Sobic001G224400--Sobic002G222900 Sobic003G368500--Sobic010G213400 Sobic010G018400 Sobic010G018400 Sobic003G368500--Sobic010G018400 Sobic003G368500--Sobic001G224400 Sobic003G368500--Sobic003G155400 Sobic004G310300 Sobic004G310300 Sobic003G368500--Sobic004G310300 Sobic004G284500 Sobic004G284500 Sobic003G368500--Sobic004G284500 Sobic005G188100 Sobic005G188100 Sobic003G368500--Sobic005G188100 Sobic003G368500--Sobic007G051000 Sobic001G418900 Sobic001G418900 Sobic003G368500--Sobic001G418900 Sobic010G217900--Sobic001G067601 Sobic010G217900--Sobic001G019900 Sobic010G217900--Sobic005G228000 Sobic010G217900--Sobic001G533300 Sobic004G247200 Sobic004G247200 Sobic010G217900--Sobic004G247200 Sobic010G217900--Sobic001G037000 Sobic010G217900--Sobic003G162700 Sobic004G177700 Sobic004G177700 Sobic010G217900--Sobic004G177700 Sobic005G028700 Sobic005G028700 Sobic010G217900--Sobic005G028700 Sobic001G308700--Sobic001G533300 Sobic001G513300 Sobic001G513300 Sobic001G308700--Sobic001G513300 Sobic008G129000 Sobic008G129000 Sobic001G308700--Sobic008G129000 Sobic009G217000 Sobic009G217000 Sobic001G308700--Sobic009G217000 Sobic010G262300 Sobic010G262300 Sobic001G308700--Sobic010G262300 Sobic002G362000 Sobic002G362000 Sobic001G308700--Sobic002G362000 Sobic001G308700--Sobic001G067601 Sobic001G308700--Sobic001G224400 Sobic003G209000 Sobic003G209000 Sobic001G308700--Sobic003G209000 Sobic004G225500 Sobic004G225500 Sobic008G189300--Sobic004G225500 Sobic004G272800 Sobic004G272800 Sobic008G189300--Sobic004G272800 Sobic008G189300--Sobic001G224400 Sobic008G189300--Sobic002G153500 Sobic008G189300--Sobic010G154700 Sobic008G189300--Sobic001G132100 Sobic002G187500 Sobic002G187500 Sobic008G189300--Sobic002G187500 Sobic001G048832 Sobic001G048832 Sobic008G189300--Sobic001G048832 Sobic001G340500 Sobic001G340500 Sobic008G189300--Sobic001G340500 Sobic004G103700 Sobic004G103700 Sobic006G010600--Sobic004G103700 Sobic001G445800 Sobic001G445800 Sobic006G010600--Sobic001G445800 Sobic004G145801 Sobic004G145801 Sobic006G010600--Sobic004G145801 Sobic001G172000 Sobic001G172000 Sobic006G010600--Sobic001G172000 Sobic010G204600 Sobic010G204600 Sobic006G010600--Sobic010G204600 Sobic006G010600--Sobic003G368500 Sobic006G010600--Sobic003G181500 Sobic002G078400 Sobic002G078400 Sobic006G010600--Sobic002G078400 Sobic006G010600--Sobic004G310300 Sobic010G225300--Sobic002G222900 Sobic010G225300--Sobic001G128400 Sobic001G066700 Sobic001G066700 Sobic010G225300--Sobic001G066700 Sobic005G111100 Sobic005G111100 Sobic010G225300--Sobic005G111100 Sobic010G225300--Sobic003G155400 Sobic002G218000 Sobic002G218000 Sobic010G225300--Sobic002G218000 Sobic010G225300--Sobic001G459200 Sobic007G091000 Sobic007G091000 Sobic010G225300--Sobic007G091000 Sobic010G225300--Sobic001G067601
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.