Gene annotation
Transcriptome id Sobic.001G308700.1
Synonym TG1, Sb01g030110, ATG1
Functional annotation ATG1, putative, expressed
UniProt A0A1B6QM37
Pfam PF03100
Panther DB PTHR34128 PTHR34128:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0017004; cytochrome complex assembly GO:0017003protein-heme linkage GO:0005886plasma membrane


Orthologs (automatic annotation)
TAIR AT3G51790 : transmembrane protein G1P-related 1
RAP-DB (Rice) LOC_Os10g39870.1 : ATG1, putative, expressed
MaizeGDB (Corn) Zm00025a003234 , Zm00025a052287
Brachypodium KQJ97676
Barley HORVU1Hr1G052930.1 , HORVU1Hr1G052930.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G533300 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
2 Sobic.001G513300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein-methionine-S-oxide reductase, putative, expressed -
3 Sobic.008G129000 phosphatidic acid phosphatase-related, putative, expressed -
4 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
5 Sobic.010G262300 coiled-coil domain-containing protein 90A, mitochondrial precursor, putative, expressed -
6 Sobic.002G362000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@vesicle transport protein GOT1B, putative, expressed -
7 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
8 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
9 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
10 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
11 Sobic.003G141700 50S ribosomal protein L15, putative, expressed K02876: RP-L15, MRPL15, large subunit ribosomal protein L15
12 Sobic.010G225300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
13 Sobic.004G268200 expressed protein -
14 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
15 Sobic.003G273000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
16 Sobic.009G063900 expressed protein -
17 Sobic.004G259600 slowmo homolog, putative, expressed -
18 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
19 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
20 Sobic.004G123000 expressed protein -


Gene co-expression network
sample Sobic001G308700 Sobic001G308700 Sobic001G533300 Sobic001G533300 Sobic001G308700--Sobic001G533300 Sobic001G513300 Sobic001G513300 Sobic001G308700--Sobic001G513300 Sobic008G129000 Sobic008G129000 Sobic001G308700--Sobic008G129000 Sobic009G217000 Sobic009G217000 Sobic001G308700--Sobic009G217000 Sobic010G262300 Sobic010G262300 Sobic001G308700--Sobic010G262300 Sobic002G362000 Sobic002G362000 Sobic001G308700--Sobic002G362000 Sobic001G067601 Sobic001G067601 Sobic001G308700--Sobic001G067601 Sobic001G224400 Sobic001G224400 Sobic001G308700--Sobic001G224400 Sobic003G209000 Sobic003G209000 Sobic001G308700--Sobic003G209000 Sobic001G533300--Sobic001G067601 Sobic002G222900 Sobic002G222900 Sobic001G533300--Sobic002G222900 Sobic001G533300--Sobic001G224400 Sobic003G368500 Sobic003G368500 Sobic001G533300--Sobic003G368500 Sobic010G217900 Sobic010G217900 Sobic001G533300--Sobic010G217900 Sobic001G533300--Sobic001G308700 Sobic008G189300 Sobic008G189300 Sobic001G533300--Sobic008G189300 Sobic006G010600 Sobic006G010600 Sobic001G533300--Sobic006G010600 Sobic010G225300 Sobic010G225300 Sobic001G533300--Sobic010G225300 Sobic003G273000 Sobic003G273000 Sobic001G513300--Sobic003G273000 Sobic004G228700 Sobic004G228700 Sobic001G513300--Sobic004G228700 Sobic007G016100 Sobic007G016100 Sobic001G513300--Sobic007G016100 Sobic001G513300--Sobic001G308700 Sobic010G031000 Sobic010G031000 Sobic001G513300--Sobic010G031000 Sobic002G136700 Sobic002G136700 Sobic001G513300--Sobic002G136700 Sobic001G508466 Sobic001G508466 Sobic001G513300--Sobic001G508466 Sobic001G295100 Sobic001G295100 Sobic001G513300--Sobic001G295100 Sobic001G513300--Sobic002G362000 Sobic008G129000--Sobic001G308700 Sobic001G284400 Sobic001G284400 Sobic008G129000--Sobic001G284400 Sobic008G129000--Sobic001G513300 Sobic004G278000 Sobic004G278000 Sobic008G129000--Sobic004G278000 Sobic002G183400 Sobic002G183400 Sobic008G129000--Sobic002G183400 Sobic006G230400 Sobic006G230400 Sobic008G129000--Sobic006G230400 Sobic004G268200 Sobic004G268200 Sobic008G129000--Sobic004G268200 Sobic008G129000--Sobic004G228700 Sobic008G129000--Sobic003G273000 Sobic004G036600 Sobic004G036600 Sobic009G217000--Sobic004G036600 Sobic003G094200 Sobic003G094200 Sobic009G217000--Sobic003G094200 Sobic003G310700 Sobic003G310700 Sobic009G217000--Sobic003G310700 Sobic010G065900 Sobic010G065900 Sobic009G217000--Sobic010G065900 Sobic006G131400 Sobic006G131400 Sobic009G217000--Sobic006G131400 Sobic004G065500 Sobic004G065500 Sobic009G217000--Sobic004G065500 Sobic009G141800 Sobic009G141800 Sobic009G217000--Sobic009G141800 Sobic005G028700 Sobic005G028700 Sobic009G217000--Sobic005G028700 Sobic006G267200 Sobic006G267200 Sobic009G217000--Sobic006G267200 Sobic006G239300 Sobic006G239300 Sobic010G262300--Sobic006G239300 Sobic010G262300--Sobic001G308700 Sobic010G262300--Sobic002G362000 Sobic004G030501 Sobic004G030501 Sobic010G262300--Sobic004G030501 Sobic001G148700 Sobic001G148700 Sobic010G262300--Sobic001G148700 Sobic004G123000 Sobic004G123000 Sobic010G262300--Sobic004G123000 Sobic006G118400 Sobic006G118400 Sobic010G262300--Sobic006G118400 Sobic010G262300--Sobic001G067601 Sobic010G262300--Sobic001G513300 Sobic002G362000--Sobic010G262300 Sobic002G362000--Sobic001G308700 Sobic002G362000--Sobic006G239300 Sobic002G362000--Sobic004G123000 Sobic002G362000--Sobic001G513300 Sobic002G362000--Sobic002G183400 Sobic004G259600 Sobic004G259600 Sobic002G362000--Sobic004G259600 Sobic009G063900 Sobic009G063900 Sobic002G362000--Sobic009G063900 Sobic002G362000--Sobic003G273000 Sobic001G019900 Sobic001G019900 Sobic001G067601--Sobic001G019900 Sobic009G023200 Sobic009G023200 Sobic001G067601--Sobic009G023200 Sobic002G046100 Sobic002G046100 Sobic001G067601--Sobic002G046100 Sobic001G067601--Sobic010G217900 Sobic003G063200 Sobic003G063200 Sobic001G067601--Sobic003G063200 Sobic001G037000 Sobic001G037000 Sobic001G067601--Sobic001G037000 Sobic005G228000 Sobic005G228000 Sobic001G067601--Sobic005G228000 Sobic003G181500 Sobic003G181500 Sobic001G067601--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic001G067601--Sobic003G162700 Sobic001G224400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic001G224400--Sobic003G155400 Sobic002G153500 Sobic002G153500 Sobic001G224400--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic001G224400--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic001G224400--Sobic010G213400 Sobic001G224400--Sobic008G189300 Sobic010G153100 Sobic010G153100 Sobic001G224400--Sobic010G153100 Sobic001G132100 Sobic001G132100 Sobic001G224400--Sobic001G132100 Sobic001G224400--Sobic002G222900 Sobic004G259200 Sobic004G259200 Sobic003G209000--Sobic004G259200 Sobic001G404800 Sobic001G404800 Sobic003G209000--Sobic001G404800 Sobic002G418400 Sobic002G418400 Sobic003G209000--Sobic002G418400 Sobic001G018500 Sobic001G018500 Sobic003G209000--Sobic001G018500 Sobic006G083500 Sobic006G083500 Sobic003G209000--Sobic006G083500 Sobic003G215700 Sobic003G215700 Sobic003G209000--Sobic003G215700 Sobic007G051000 Sobic007G051000 Sobic003G209000--Sobic007G051000 Sobic009G119900 Sobic009G119900 Sobic003G209000--Sobic009G119900 Sobic002G398901 Sobic002G398901 Sobic003G209000--Sobic002G398901
Octagon: transcription factors


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