Gene annotation
Transcriptome id Sobic.004G268200.2,Sobic.004G268200.1
Synonym Sb04g030610
Functional annotation expressed protein
UniProt C5Y0C1
Pfam -
Panther DB PTHR35490 PTHR35490:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50910 : -
RAP-DB (Rice) LOC_Os02g47580.1 : expressed protein
MaizeGDB (Corn) Zm00025a021712 , Zm00025a032439 , Zm00025a044514
Brachypodium KQK00931 , KQK00930
Barley HORVU6Hr1G068770.1 , HORVU6Hr1G068770.2 , HORVU6Hr1G068770.3
Wheat TraesCS6A02G272000 , TraesCS6D02G252200 , TraesCS6B02G299600
Populus -


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cDNA sequences
Sobic.004G268200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
2 Sobic.001G308700 ATG1, putative, expressed -
3 Sobic.001G513300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein-methionine-S-oxide reductase, putative, expressed -
4 Sobic.008G129000 phosphatidic acid phosphatase-related, putative, expressed -
5 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
6 Sobic.002G386800 protein kinase domain containing protein, expressed -
7 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
9 Sobic.004G339300 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
10 Sobic.010G204300 expressed protein -
11 Sobic.001G095300 prenylated rab acceptor, putative, expressed -
12 Sobic.006G263100 expressed protein -
13 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
14 Sobic.003G310700 mal d 1-associated protein, putative, expressed -
15 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
16 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
17 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
18 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
19 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
20 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -


Gene co-expression network
sample Sobic004G268200 Sobic004G268200 Sobic007G171000 Sobic007G171000 Sobic004G268200--Sobic007G171000 Sobic001G308700 Sobic001G308700 Sobic004G268200--Sobic001G308700 Sobic001G513300 Sobic001G513300 Sobic004G268200--Sobic001G513300 Sobic008G129000 Sobic008G129000 Sobic004G268200--Sobic008G129000 Sobic002G202300 Sobic002G202300 Sobic004G268200--Sobic002G202300 Sobic002G386800 Sobic002G386800 Sobic004G268200--Sobic002G386800 Sobic010G246000 Sobic010G246000 Sobic004G268200--Sobic010G246000 Sobic005G028700 Sobic005G028700 Sobic004G268200--Sobic005G028700 Sobic004G339300 Sobic004G339300 Sobic004G268200--Sobic004G339300 Sobic009G155200 Sobic009G155200 Sobic007G171000--Sobic009G155200 Sobic002G195900 Sobic002G195900 Sobic007G171000--Sobic002G195900 Sobic003G429300 Sobic003G429300 Sobic007G171000--Sobic003G429300 Sobic001G119000 Sobic001G119000 Sobic007G171000--Sobic001G119000 Sobic009G177800 Sobic009G177800 Sobic007G171000--Sobic009G177800 Sobic002G359300 Sobic002G359300 Sobic007G171000--Sobic002G359300 Sobic002G046100 Sobic002G046100 Sobic007G171000--Sobic002G046100 Sobic008G111100 Sobic008G111100 Sobic007G171000--Sobic008G111100 Sobic007G137700 Sobic007G137700 Sobic007G171000--Sobic007G137700 Sobic001G533300 Sobic001G533300 Sobic001G308700--Sobic001G533300 Sobic001G308700--Sobic001G513300 Sobic001G308700--Sobic008G129000 Sobic009G217000 Sobic009G217000 Sobic001G308700--Sobic009G217000 Sobic010G262300 Sobic010G262300 Sobic001G308700--Sobic010G262300 Sobic002G362000 Sobic002G362000 Sobic001G308700--Sobic002G362000 Sobic001G067601 Sobic001G067601 Sobic001G308700--Sobic001G067601 Sobic001G224400 Sobic001G224400 Sobic001G308700--Sobic001G224400 Sobic003G209000 Sobic003G209000 Sobic001G308700--Sobic003G209000 Sobic003G273000 Sobic003G273000 Sobic001G513300--Sobic003G273000 Sobic004G228700 Sobic004G228700 Sobic001G513300--Sobic004G228700 Sobic007G016100 Sobic007G016100 Sobic001G513300--Sobic007G016100 Sobic001G513300--Sobic001G308700 Sobic010G031000 Sobic010G031000 Sobic001G513300--Sobic010G031000 Sobic002G136700 Sobic002G136700 Sobic001G513300--Sobic002G136700 Sobic001G508466 Sobic001G508466 Sobic001G513300--Sobic001G508466 Sobic001G295100 Sobic001G295100 Sobic001G513300--Sobic001G295100 Sobic001G513300--Sobic002G362000 Sobic008G129000--Sobic001G308700 Sobic001G284400 Sobic001G284400 Sobic008G129000--Sobic001G284400 Sobic008G129000--Sobic001G513300 Sobic004G278000 Sobic004G278000 Sobic008G129000--Sobic004G278000 Sobic002G183400 Sobic002G183400 Sobic008G129000--Sobic002G183400 Sobic006G230400 Sobic006G230400 Sobic008G129000--Sobic006G230400 Sobic008G129000--Sobic004G268200 Sobic008G129000--Sobic004G228700 Sobic008G129000--Sobic003G273000 Sobic003G253000 Sobic003G253000 Sobic002G202300--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic002G202300--Sobic003G220600 Sobic006G141500 Sobic006G141500 Sobic002G202300--Sobic006G141500 Sobic006G264300 Sobic006G264300 Sobic002G202300--Sobic006G264300 Sobic002G202300--Sobic002G046100 Sobic003G115800 Sobic003G115800 Sobic002G202300--Sobic003G115800 Sobic010G204300 Sobic010G204300 Sobic002G202300--Sobic010G204300 Sobic006G062800 Sobic006G062800 Sobic002G202300--Sobic006G062800 Sobic006G182100 Sobic006G182100 Sobic002G202300--Sobic006G182100 Sobic002G386800--Sobic006G182100 Sobic010G268400 Sobic010G268400 Sobic002G386800--Sobic010G268400 Sobic001G107400 Sobic001G107400 Sobic002G386800--Sobic001G107400 Sobic006G131400 Sobic006G131400 Sobic002G386800--Sobic006G131400 Sobic003G285800 Sobic003G285800 Sobic002G386800--Sobic003G285800 Sobic002G345300 Sobic002G345300 Sobic002G386800--Sobic002G345300 Sobic001G281400 Sobic001G281400 Sobic002G386800--Sobic001G281400 Sobic008G033600 Sobic008G033600 Sobic002G386800--Sobic008G033600 Sobic002G386800--Sobic007G171000 Sobic002G294700 Sobic002G294700 Sobic010G246000--Sobic002G294700 Sobic002G374100 Sobic002G374100 Sobic010G246000--Sobic002G374100 Sobic003G019200 Sobic003G019200 Sobic010G246000--Sobic003G019200 Sobic001G147200 Sobic001G147200 Sobic010G246000--Sobic001G147200 Sobic010G245800 Sobic010G245800 Sobic010G246000--Sobic010G245800 Sobic008G177800 Sobic008G177800 Sobic010G246000--Sobic008G177800 Sobic002G354900 Sobic002G354900 Sobic010G246000--Sobic002G354900 Sobic010G234600 Sobic010G234600 Sobic010G246000--Sobic010G234600 Sobic004G036600 Sobic004G036600 Sobic010G246000--Sobic004G036600 Sobic003G063200 Sobic003G063200 Sobic005G028700--Sobic003G063200 Sobic009G129000 Sobic009G129000 Sobic005G028700--Sobic009G129000 Sobic010G086200 Sobic010G086200 Sobic005G028700--Sobic010G086200 Sobic004G065500 Sobic004G065500 Sobic005G028700--Sobic004G065500 Sobic004G247200 Sobic004G247200 Sobic005G028700--Sobic004G247200 Sobic007G151100 Sobic007G151100 Sobic005G028700--Sobic007G151100 Sobic002G356101 Sobic002G356101 Sobic005G028700--Sobic002G356101 Sobic001G477300 Sobic001G477300 Sobic005G028700--Sobic001G477300 Sobic004G306300 Sobic004G306300 Sobic005G028700--Sobic004G306300 Sobic003G141700 Sobic003G141700 Sobic004G339300--Sobic003G141700 Sobic004G339300--Sobic001G224400 Sobic003G116600 Sobic003G116600 Sobic004G339300--Sobic003G116600 Sobic001G074700 Sobic001G074700 Sobic004G339300--Sobic001G074700 Sobic003G152900 Sobic003G152900 Sobic004G339300--Sobic003G152900 Sobic001G077000 Sobic001G077000 Sobic004G339300--Sobic001G077000 Sobic002G194100 Sobic002G194100 Sobic004G339300--Sobic002G194100 Sobic004G339300--Sobic002G202300 Sobic004G170400 Sobic004G170400 Sobic004G339300--Sobic004G170400
Octagon: transcription factors


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