Gene annotation
Transcriptome id Sobic.002G386800.1
Synonym Sb02g040300, VIK
Functional annotation protein kinase domain containing protein, expressed
UniProt C5X381
Pfam PF07714 PF12796
Panther DB PTHR23257:SF366 PTHR23257
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0004672; protein kinase activity GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT1G14000 : VH1-interacting kinase
RAP-DB (Rice) LOC_Os07g43900.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a048865 , Zm00025a014949
Brachypodium PNT74692 , KQK15061 , KQK15062
Barley HORVU2Hr1G028230.9 , HORVU2Hr1G028230.8 , HORVU2Hr1G028230.5 , HORVU2Hr1G028230.4 , HORVU2Hr1G028230.7 , HORVU2Hr1G028230.6 , HORVU2Hr1G028230.1 , HORVU2Hr1G028230.3 , HORVU2Hr1G028230.2 , HORVU2Hr1G028230.11 , HORVU2Hr1G028230.10 , HORVU2Hr1G028230.13 , HORVU2Hr1G028230.12 , HORVU2Hr1G028230.15 , HORVU2Hr1G028230.14
Wheat TraesCS2B02G180500 , TraesCS2D02G161300 , TraesCS2A02G155500
Populus -


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cDNA sequences
Sobic.002G386800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G182100 ORM1, putative, expressed -
2 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
3 Sobic.001G107400 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.006G131400 expressed protein -
5 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
6 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
7 Sobic.001G281400 expressed protein -
8 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
9 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
10 Sobic.004G144500 aspartic proteinase-like protein 2 precursor, putative, expressed -
11 Sobic.009G155200 ZOS5-08 - C2H2 zinc finger protein, expressed -
12 Sobic.004G308400 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
13 Sobic.004G157800 LITAF-domain-containing protein, putative, expressed K19363: lipopolysaccharide-induced tumor necrosis factor-alpha factor
14 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
15 Sobic.004G269700 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K04708: 3-dehydrosphinganine reductase
16 Sobic.001G064800 expp1 protein precursor, putative, expressed -
17 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
18 Sobic.001G206400 fiber protein Fb34, putative, expressed -
19 Sobic.003G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alanyl-tRNA synthetase, putative, expressed -
20 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II


Gene co-expression network
sample Sobic002G386800 Sobic002G386800 Sobic006G182100 Sobic006G182100 Sobic002G386800--Sobic006G182100 Sobic010G268400 Sobic010G268400 Sobic002G386800--Sobic010G268400 Sobic001G107400 Sobic001G107400 Sobic002G386800--Sobic001G107400 Sobic006G131400 Sobic006G131400 Sobic002G386800--Sobic006G131400 Sobic003G285800 Sobic003G285800 Sobic002G386800--Sobic003G285800 Sobic002G345300 Sobic002G345300 Sobic002G386800--Sobic002G345300 Sobic001G281400 Sobic001G281400 Sobic002G386800--Sobic001G281400 Sobic008G033600 Sobic008G033600 Sobic002G386800--Sobic008G033600 Sobic007G171000 Sobic007G171000 Sobic002G386800--Sobic007G171000 Sobic004G284500 Sobic004G284500 Sobic006G182100--Sobic004G284500 Sobic009G033700 Sobic009G033700 Sobic006G182100--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic006G182100--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic006G182100--Sobic010G018400 Sobic004G196300 Sobic004G196300 Sobic006G182100--Sobic004G196300 Sobic006G182100--Sobic001G281400 Sobic008G185400 Sobic008G185400 Sobic006G182100--Sobic008G185400 Sobic003G368500 Sobic003G368500 Sobic006G182100--Sobic003G368500 Sobic001G445800 Sobic001G445800 Sobic006G182100--Sobic001G445800 Sobic002G329000 Sobic002G329000 Sobic010G268400--Sobic002G329000 Sobic001G516600 Sobic001G516600 Sobic010G268400--Sobic001G516600 Sobic003G192100 Sobic003G192100 Sobic010G268400--Sobic003G192100 Sobic005G093000 Sobic005G093000 Sobic010G268400--Sobic005G093000 Sobic010G268400--Sobic001G107400 Sobic003G037800 Sobic003G037800 Sobic010G268400--Sobic003G037800 Sobic002G245100 Sobic002G245100 Sobic010G268400--Sobic002G245100 Sobic003G429000 Sobic003G429000 Sobic010G268400--Sobic003G429000 Sobic010G195500 Sobic010G195500 Sobic010G268400--Sobic010G195500 Sobic001G107400--Sobic002G245100 Sobic004G187900 Sobic004G187900 Sobic001G107400--Sobic004G187900 Sobic001G107400--Sobic003G037800 Sobic009G141800 Sobic009G141800 Sobic001G107400--Sobic009G141800 Sobic001G107400--Sobic003G429000 Sobic005G018700 Sobic005G018700 Sobic001G107400--Sobic005G018700 Sobic001G107400--Sobic001G281400 Sobic004G321300 Sobic004G321300 Sobic001G107400--Sobic004G321300 Sobic009G159400 Sobic009G159400 Sobic001G107400--Sobic009G159400 Sobic006G131400--Sobic001G516600 Sobic003G094200 Sobic003G094200 Sobic006G131400--Sobic003G094200 Sobic002G343500 Sobic002G343500 Sobic006G131400--Sobic002G343500 Sobic006G131400--Sobic003G285800 Sobic006G131400--Sobic009G033700 Sobic004G318100 Sobic004G318100 Sobic006G131400--Sobic004G318100 Sobic009G129000 Sobic009G129000 Sobic006G131400--Sobic009G129000 Sobic006G131400--Sobic001G107400 Sobic004G036600 Sobic004G036600 Sobic006G131400--Sobic004G036600 Sobic003G285800--Sobic002G046100 Sobic002G187500 Sobic002G187500 Sobic003G285800--Sobic002G187500 Sobic010G178200 Sobic010G178200 Sobic003G285800--Sobic010G178200 Sobic003G350300 Sobic003G350300 Sobic003G285800--Sobic003G350300 Sobic003G285800--Sobic002G345300 Sobic001G477300 Sobic001G477300 Sobic003G285800--Sobic001G477300 Sobic003G285800--Sobic001G281400 Sobic010G086200 Sobic010G086200 Sobic003G285800--Sobic010G086200 Sobic003G285800--Sobic009G129000 Sobic002G345300--Sobic002G046100 Sobic002G345300--Sobic003G350300 Sobic002G345300--Sobic001G281400 Sobic002G345300--Sobic010G178200 Sobic002G267500 Sobic002G267500 Sobic002G345300--Sobic002G267500 Sobic003G253000 Sobic003G253000 Sobic002G345300--Sobic003G253000 Sobic002G345300--Sobic003G285800 Sobic004G272800 Sobic004G272800 Sobic002G345300--Sobic004G272800 Sobic010G149300 Sobic010G149300 Sobic002G345300--Sobic010G149300 Sobic001G281400--Sobic004G187900 Sobic001G281400--Sobic002G267500 Sobic001G281400--Sobic010G149300 Sobic002G190900 Sobic002G190900 Sobic001G281400--Sobic002G190900 Sobic001G281400--Sobic002G046100 Sobic001G281400--Sobic010G086200 Sobic001G281400--Sobic009G141800 Sobic009G008900 Sobic009G008900 Sobic001G281400--Sobic009G008900 Sobic001G499300 Sobic001G499300 Sobic001G281400--Sobic001G499300 Sobic004G055200 Sobic004G055200 Sobic008G033600--Sobic004G055200 Sobic006G173900 Sobic006G173900 Sobic008G033600--Sobic006G173900 Sobic008G033600--Sobic004G187900 Sobic008G033600--Sobic001G281400 Sobic008G033600--Sobic002G267500 Sobic003G377900 Sobic003G377900 Sobic008G033600--Sobic003G377900 Sobic008G033600--Sobic009G008900 Sobic001G459200 Sobic001G459200 Sobic008G033600--Sobic001G459200 Sobic008G033600--Sobic010G149300 Sobic009G155200 Sobic009G155200 Sobic007G171000--Sobic009G155200 Sobic002G195900 Sobic002G195900 Sobic007G171000--Sobic002G195900 Sobic003G429300 Sobic003G429300 Sobic007G171000--Sobic003G429300 Sobic001G119000 Sobic001G119000 Sobic007G171000--Sobic001G119000 Sobic009G177800 Sobic009G177800 Sobic007G171000--Sobic009G177800 Sobic002G359300 Sobic002G359300 Sobic007G171000--Sobic002G359300 Sobic007G171000--Sobic002G046100 Sobic008G111100 Sobic008G111100 Sobic007G171000--Sobic008G111100 Sobic007G137700 Sobic007G137700 Sobic007G171000--Sobic007G137700
Octagon: transcription factors


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