Gene annotation
Transcriptome id Sobic.001G206400.1
Synonym Sb01g018250
Functional annotation fiber protein Fb34, putative, expressed
UniProt C5WXB0
Pfam PF06749
Panther DB PTHR31769 PTHR31769:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15480 : Protein of unknown function (DUF1218)
RAP-DB (Rice) LOC_Os10g35294.1 : fiber protein Fb34, putative, expressed
MaizeGDB (Corn) Zm00025a006469
Brachypodium -
Barley -
Wheat TraesCS1B02G185600 , TraesCS1D02G171800 , TraesCS1A02G171400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
2 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
3 Sobic.002G245100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
4 Sobic.003G037800 transferase family protein, putative, expressed -
5 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
6 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
7 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
8 Sobic.010G086200 GRAM domain containing protein, expressed -
9 Sobic.001G281400 expressed protein -
10 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
11 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
12 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
13 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
14 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
15 Sobic.006G131400 expressed protein -
16 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
17 Sobic.003G192100 expressed protein -
18 Sobic.010G228000 Protein kinase domain containing protein, expressed -
19 Sobic.003G430400 OsCML31 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
20 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -


Gene co-expression network
sample Sobic001G206400 Sobic001G206400 Sobic009G033700 Sobic009G033700 Sobic001G206400--Sobic009G033700 Sobic001G516600 Sobic001G516600 Sobic001G206400--Sobic001G516600 Sobic002G245100 Sobic002G245100 Sobic001G206400--Sobic002G245100 Sobic003G037800 Sobic003G037800 Sobic001G206400--Sobic003G037800 Sobic009G200700 Sobic009G200700 Sobic001G206400--Sobic009G200700 Sobic002G374100 Sobic002G374100 Sobic001G206400--Sobic002G374100 Sobic010G268400 Sobic010G268400 Sobic001G206400--Sobic010G268400 Sobic010G086200 Sobic010G086200 Sobic001G206400--Sobic010G086200 Sobic001G281400 Sobic001G281400 Sobic001G206400--Sobic001G281400 Sobic009G033700--Sobic010G086200 Sobic009G033700--Sobic003G037800 Sobic009G033700--Sobic001G281400 Sobic003G249800 Sobic003G249800 Sobic009G033700--Sobic003G249800 Sobic007G198100 Sobic007G198100 Sobic009G033700--Sobic007G198100 Sobic009G129000 Sobic009G129000 Sobic009G033700--Sobic009G129000 Sobic009G033700--Sobic002G245100 Sobic009G143400 Sobic009G143400 Sobic009G033700--Sobic009G143400 Sobic004G065500 Sobic004G065500 Sobic009G033700--Sobic004G065500 Sobic001G173300 Sobic001G173300 Sobic001G516600--Sobic001G173300 Sobic007G151100 Sobic007G151100 Sobic001G516600--Sobic007G151100 Sobic001G516600--Sobic003G037800 Sobic003G296700 Sobic003G296700 Sobic001G516600--Sobic003G296700 Sobic001G516600--Sobic010G268400 Sobic001G532200 Sobic001G532200 Sobic001G516600--Sobic001G532200 Sobic006G131400 Sobic006G131400 Sobic001G516600--Sobic006G131400 Sobic008G177800 Sobic008G177800 Sobic001G516600--Sobic008G177800 Sobic001G516600--Sobic002G245100 Sobic005G018700 Sobic005G018700 Sobic002G245100--Sobic005G018700 Sobic002G245100--Sobic003G037800 Sobic004G237800 Sobic004G237800 Sobic002G245100--Sobic004G237800 Sobic002G202600 Sobic002G202600 Sobic002G245100--Sobic002G202600 Sobic005G196800 Sobic005G196800 Sobic002G245100--Sobic005G196800 Sobic004G340900 Sobic004G340900 Sobic002G245100--Sobic004G340900 Sobic004G321300 Sobic004G321300 Sobic002G245100--Sobic004G321300 Sobic003G158500 Sobic003G158500 Sobic002G245100--Sobic003G158500 Sobic001G107400 Sobic001G107400 Sobic002G245100--Sobic001G107400 Sobic003G429000 Sobic003G429000 Sobic003G037800--Sobic003G429000 Sobic003G037800--Sobic002G245100 Sobic001G389000 Sobic001G389000 Sobic003G037800--Sobic001G389000 Sobic003G037800--Sobic009G033700 Sobic009G159400 Sobic009G159400 Sobic003G037800--Sobic009G159400 Sobic003G037800--Sobic005G018700 Sobic006G183400 Sobic006G183400 Sobic003G037800--Sobic006G183400 Sobic003G037800--Sobic004G321300 Sobic003G037800--Sobic004G340900 Sobic002G140300 Sobic002G140300 Sobic009G200700--Sobic002G140300 Sobic009G036100 Sobic009G036100 Sobic009G200700--Sobic009G036100 Sobic003G324400 Sobic003G324400 Sobic009G200700--Sobic003G324400 Sobic002G356101 Sobic002G356101 Sobic009G200700--Sobic002G356101 Sobic006G165100 Sobic006G165100 Sobic009G200700--Sobic006G165100 Sobic001G040200 Sobic001G040200 Sobic009G200700--Sobic001G040200 Sobic009G200700--Sobic009G129000 Sobic006G230500 Sobic006G230500 Sobic009G200700--Sobic006G230500 Sobic001G258300 Sobic001G258300 Sobic009G200700--Sobic001G258300 Sobic002G294700 Sobic002G294700 Sobic002G374100--Sobic002G294700 Sobic010G246000 Sobic010G246000 Sobic002G374100--Sobic010G246000 Sobic002G374100--Sobic001G516600 Sobic002G354900 Sobic002G354900 Sobic002G374100--Sobic002G354900 Sobic010G228000 Sobic010G228000 Sobic002G374100--Sobic010G228000 Sobic004G036600 Sobic004G036600 Sobic002G374100--Sobic004G036600 Sobic002G353400 Sobic002G353400 Sobic002G374100--Sobic002G353400 Sobic002G374100--Sobic008G177800 Sobic002G118600 Sobic002G118600 Sobic002G374100--Sobic002G118600 Sobic002G329000 Sobic002G329000 Sobic010G268400--Sobic002G329000 Sobic010G268400--Sobic001G516600 Sobic003G192100 Sobic003G192100 Sobic010G268400--Sobic003G192100 Sobic005G093000 Sobic005G093000 Sobic010G268400--Sobic005G093000 Sobic010G268400--Sobic001G107400 Sobic010G268400--Sobic003G037800 Sobic010G268400--Sobic002G245100 Sobic010G268400--Sobic003G429000 Sobic010G195500 Sobic010G195500 Sobic010G268400--Sobic010G195500 Sobic006G267200 Sobic006G267200 Sobic010G086200--Sobic006G267200 Sobic010G086200--Sobic004G065500 Sobic010G086200--Sobic004G321300 Sobic009G141800 Sobic009G141800 Sobic010G086200--Sobic009G141800 Sobic010G086200--Sobic009G129000 Sobic010G086200--Sobic009G143400 Sobic001G459800 Sobic001G459800 Sobic010G086200--Sobic001G459800 Sobic010G086200--Sobic009G033700 Sobic003G393900 Sobic003G393900 Sobic010G086200--Sobic003G393900 Sobic004G187900 Sobic004G187900 Sobic001G281400--Sobic004G187900 Sobic002G267500 Sobic002G267500 Sobic001G281400--Sobic002G267500 Sobic010G149300 Sobic010G149300 Sobic001G281400--Sobic010G149300 Sobic002G190900 Sobic002G190900 Sobic001G281400--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic001G281400--Sobic002G046100 Sobic001G281400--Sobic010G086200 Sobic001G281400--Sobic009G141800 Sobic009G008900 Sobic009G008900 Sobic001G281400--Sobic009G008900 Sobic001G499300 Sobic001G499300 Sobic001G281400--Sobic001G499300
Octagon: transcription factors


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