Gene annotation
Transcriptome id Sobic.001G064800.2
Synonym Sb01g005890
Functional annotation expp1 protein precursor, putative, expressed
UniProt A0A1Z5S4M8
Pfam -
Panther DB PTHR21454 PTHR21454:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G44150 : -
RAP-DB (Rice) LOC_Os03g57320.1 : expp1 protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a016620
Brachypodium KQK12846
Barley -
Wheat TraesCS5A02G425700 , TraesCS5B02G427700 , TraesCSU02G076300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G182100 ORM1, putative, expressed -
2 Sobic.002G261800 snRK1-interacting protein 1, putative, expressed -
3 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
4 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
5 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
6 Sobic.001G445800 expressed protein -
7 Sobic.010G204300 expressed protein -
8 Sobic.004G157800 LITAF-domain-containing protein, putative, expressed K19363: lipopolysaccharide-induced tumor necrosis factor-alpha factor
9 Sobic.001G206400 fiber protein Fb34, putative, expressed -
10 Sobic.005G092800 expressed protein -
11 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
12 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
13 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e
14 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
15 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
16 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
17 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -
18 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
19 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
20 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta


Gene co-expression network
sample Sobic001G064800 Sobic001G064800 Sobic006G182100 Sobic006G182100 Sobic001G064800--Sobic006G182100 Sobic002G261800 Sobic002G261800 Sobic001G064800--Sobic002G261800 Sobic001G067601 Sobic001G067601 Sobic001G064800--Sobic001G067601 Sobic010G153100 Sobic010G153100 Sobic001G064800--Sobic010G153100 Sobic001G019900 Sobic001G019900 Sobic001G064800--Sobic001G019900 Sobic001G445800 Sobic001G445800 Sobic001G064800--Sobic001G445800 Sobic010G204300 Sobic010G204300 Sobic001G064800--Sobic010G204300 Sobic004G157800 Sobic004G157800 Sobic001G064800--Sobic004G157800 Sobic001G206400 Sobic001G206400 Sobic001G064800--Sobic001G206400 Sobic004G284500 Sobic004G284500 Sobic006G182100--Sobic004G284500 Sobic009G033700 Sobic009G033700 Sobic006G182100--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic006G182100--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic006G182100--Sobic010G018400 Sobic004G196300 Sobic004G196300 Sobic006G182100--Sobic004G196300 Sobic001G281400 Sobic001G281400 Sobic006G182100--Sobic001G281400 Sobic008G185400 Sobic008G185400 Sobic006G182100--Sobic008G185400 Sobic003G368500 Sobic003G368500 Sobic006G182100--Sobic003G368500 Sobic006G182100--Sobic001G445800 Sobic002G261800--Sobic001G064800 Sobic006G141500 Sobic006G141500 Sobic002G261800--Sobic006G141500 Sobic002G282400 Sobic002G282400 Sobic002G261800--Sobic002G282400 Sobic006G204300 Sobic006G204300 Sobic002G261800--Sobic006G204300 Sobic002G261800--Sobic010G153100 Sobic004G172700 Sobic004G172700 Sobic002G261800--Sobic004G172700 Sobic002G261800--Sobic001G445800 Sobic009G016201 Sobic009G016201 Sobic002G261800--Sobic009G016201 Sobic002G180600 Sobic002G180600 Sobic002G261800--Sobic002G180600 Sobic001G067601--Sobic001G019900 Sobic009G023200 Sobic009G023200 Sobic001G067601--Sobic009G023200 Sobic001G067601--Sobic002G046100 Sobic010G217900 Sobic010G217900 Sobic001G067601--Sobic010G217900 Sobic003G063200 Sobic003G063200 Sobic001G067601--Sobic003G063200 Sobic001G037000 Sobic001G037000 Sobic001G067601--Sobic001G037000 Sobic005G228000 Sobic005G228000 Sobic001G067601--Sobic005G228000 Sobic003G181500 Sobic003G181500 Sobic001G067601--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic001G067601--Sobic003G162700 Sobic001G084900 Sobic001G084900 Sobic010G153100--Sobic001G084900 Sobic001G224400 Sobic001G224400 Sobic010G153100--Sobic001G224400 Sobic003G155400 Sobic003G155400 Sobic010G153100--Sobic003G155400 Sobic010G153100--Sobic001G445800 Sobic010G154700 Sobic010G154700 Sobic010G153100--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic010G153100--Sobic010G213400 Sobic007G115100 Sobic007G115100 Sobic010G153100--Sobic007G115100 Sobic010G153100--Sobic001G067601 Sobic010G153100--Sobic006G141500 Sobic001G019900--Sobic001G067601 Sobic001G019900--Sobic005G228000 Sobic001G019900--Sobic009G023200 Sobic003G350300 Sobic003G350300 Sobic001G019900--Sobic003G350300 Sobic003G249800 Sobic003G249800 Sobic001G019900--Sobic003G249800 Sobic001G019900--Sobic002G046100 Sobic001G019900--Sobic001G445800 Sobic002G212200 Sobic002G212200 Sobic001G019900--Sobic002G212200 Sobic003G321700 Sobic003G321700 Sobic001G019900--Sobic003G321700 Sobic008G129400 Sobic008G129400 Sobic001G445800--Sobic008G129400 Sobic001G445800--Sobic003G321700 Sobic002G078400 Sobic002G078400 Sobic001G445800--Sobic002G078400 Sobic001G445800--Sobic003G249800 Sobic001G445800--Sobic002G046100 Sobic001G445800--Sobic010G018400 Sobic001G445800--Sobic010G154700 Sobic001G445800--Sobic001G019900 Sobic002G190900 Sobic002G190900 Sobic001G445800--Sobic002G190900 Sobic008G161000 Sobic008G161000 Sobic010G204300--Sobic008G161000 Sobic003G115800 Sobic003G115800 Sobic010G204300--Sobic003G115800 Sobic007G059900 Sobic007G059900 Sobic010G204300--Sobic007G059900 Sobic001G147200 Sobic001G147200 Sobic010G204300--Sobic001G147200 Sobic002G296300 Sobic002G296300 Sobic010G204300--Sobic002G296300 Sobic002G202300 Sobic002G202300 Sobic010G204300--Sobic002G202300 Sobic010G204300--Sobic003G181500 Sobic006G062800 Sobic006G062800 Sobic010G204300--Sobic006G062800 Sobic010G246000 Sobic010G246000 Sobic010G204300--Sobic010G246000 Sobic004G157800--Sobic001G064800 Sobic004G157800--Sobic002G078400 Sobic004G157800--Sobic006G182100 Sobic009G249000 Sobic009G249000 Sobic004G157800--Sobic009G249000 Sobic009G094450 Sobic009G094450 Sobic004G157800--Sobic009G094450 Sobic001G526100 Sobic001G526100 Sobic004G157800--Sobic001G526100 Sobic005G092800 Sobic005G092800 Sobic004G157800--Sobic005G092800 Sobic004G157800--Sobic001G445800 Sobic001G403700 Sobic001G403700 Sobic004G157800--Sobic001G403700 Sobic001G206400--Sobic009G033700 Sobic001G516600 Sobic001G516600 Sobic001G206400--Sobic001G516600 Sobic002G245100 Sobic002G245100 Sobic001G206400--Sobic002G245100 Sobic003G037800 Sobic003G037800 Sobic001G206400--Sobic003G037800 Sobic009G200700 Sobic009G200700 Sobic001G206400--Sobic009G200700 Sobic002G374100 Sobic002G374100 Sobic001G206400--Sobic002G374100 Sobic010G268400 Sobic010G268400 Sobic001G206400--Sobic010G268400 Sobic010G086200 Sobic010G086200 Sobic001G206400--Sobic010G086200 Sobic001G206400--Sobic001G281400
Octagon: transcription factors


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