Gene annotation
Transcriptome id Sobic.002G261800.1
Synonym Sb02g029660
Functional annotation snRK1-interacting protein 1, putative, expressed
UniProt C5X5C4
Pfam -
Panther DB PTHR34050 PTHR34050:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47870 : -
RAP-DB (Rice) LOC_Os09g33790.1 : snRK1-interacting protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a047623
Brachypodium KQJ90980
Barley HORVU5Hr1G078090.2 , HORVU5Hr1G078090.1
Wheat TraesCS5D02G303500 , TraesCS5A02G296300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G064800 expp1 protein precursor, putative, expressed -
2 Sobic.006G141500 expressed protein -
3 Sobic.002G282400 expressed protein -
4 Sobic.006G204300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
5 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
6 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
7 Sobic.001G445800 expressed protein -
8 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
9 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
10 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
11 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
12 Sobic.009G180000 OsCam1-3 - Calmodulin, expressed K02183: calmodulin
13 Sobic.001G047700 expressed protein -
14 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
15 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
16 Sobic.005G092800 expressed protein -
17 Sobic.001G037000 PHD finger protein, putative, expressed -
18 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
19 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
20 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -


Gene co-expression network
sample Sobic002G261800 Sobic002G261800 Sobic001G064800 Sobic001G064800 Sobic002G261800--Sobic001G064800 Sobic006G141500 Sobic006G141500 Sobic002G261800--Sobic006G141500 Sobic002G282400 Sobic002G282400 Sobic002G261800--Sobic002G282400 Sobic006G204300 Sobic006G204300 Sobic002G261800--Sobic006G204300 Sobic010G153100 Sobic010G153100 Sobic002G261800--Sobic010G153100 Sobic004G172700 Sobic004G172700 Sobic002G261800--Sobic004G172700 Sobic001G445800 Sobic001G445800 Sobic002G261800--Sobic001G445800 Sobic009G016201 Sobic009G016201 Sobic002G261800--Sobic009G016201 Sobic002G180600 Sobic002G180600 Sobic002G261800--Sobic002G180600 Sobic006G182100 Sobic006G182100 Sobic001G064800--Sobic006G182100 Sobic001G064800--Sobic002G261800 Sobic001G067601 Sobic001G067601 Sobic001G064800--Sobic001G067601 Sobic001G064800--Sobic010G153100 Sobic001G019900 Sobic001G019900 Sobic001G064800--Sobic001G019900 Sobic001G064800--Sobic001G445800 Sobic010G204300 Sobic010G204300 Sobic001G064800--Sobic010G204300 Sobic004G157800 Sobic004G157800 Sobic001G064800--Sobic004G157800 Sobic001G206400 Sobic001G206400 Sobic001G064800--Sobic001G206400 Sobic003G253000 Sobic003G253000 Sobic006G141500--Sobic003G253000 Sobic010G243200 Sobic010G243200 Sobic006G141500--Sobic010G243200 Sobic006G141500--Sobic002G282400 Sobic002G218000 Sobic002G218000 Sobic006G141500--Sobic002G218000 Sobic004G300900 Sobic004G300900 Sobic006G141500--Sobic004G300900 Sobic003G350300 Sobic003G350300 Sobic006G141500--Sobic003G350300 Sobic008G161800 Sobic008G161800 Sobic006G141500--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic006G141500--Sobic004G248800 Sobic002G046100 Sobic002G046100 Sobic006G141500--Sobic002G046100 Sobic003G249800 Sobic003G249800 Sobic002G282400--Sobic003G249800 Sobic002G282400--Sobic010G243200 Sobic009G143400 Sobic009G143400 Sobic002G282400--Sobic009G143400 Sobic002G282400--Sobic006G141500 Sobic003G181500 Sobic003G181500 Sobic002G282400--Sobic003G181500 Sobic001G037000 Sobic001G037000 Sobic002G282400--Sobic001G037000 Sobic001G071100 Sobic001G071100 Sobic002G282400--Sobic001G071100 Sobic002G211900 Sobic002G211900 Sobic002G282400--Sobic002G211900 Sobic002G393000 Sobic002G393000 Sobic002G282400--Sobic002G393000 Sobic006G204300--Sobic002G046100 Sobic001G025300 Sobic001G025300 Sobic006G204300--Sobic001G025300 Sobic002G267500 Sobic002G267500 Sobic006G204300--Sobic002G267500 Sobic002G183200 Sobic002G183200 Sobic006G204300--Sobic002G183200 Sobic006G204300--Sobic002G282400 Sobic007G107000 Sobic007G107000 Sobic006G204300--Sobic007G107000 Sobic006G204300--Sobic009G143400 Sobic004G144500 Sobic004G144500 Sobic006G204300--Sobic004G144500 Sobic002G345300 Sobic002G345300 Sobic006G204300--Sobic002G345300 Sobic001G084900 Sobic001G084900 Sobic010G153100--Sobic001G084900 Sobic001G224400 Sobic001G224400 Sobic010G153100--Sobic001G224400 Sobic003G155400 Sobic003G155400 Sobic010G153100--Sobic003G155400 Sobic010G153100--Sobic001G445800 Sobic010G154700 Sobic010G154700 Sobic010G153100--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic010G153100--Sobic010G213400 Sobic007G115100 Sobic007G115100 Sobic010G153100--Sobic007G115100 Sobic010G153100--Sobic001G067601 Sobic010G153100--Sobic006G141500 Sobic004G172700--Sobic009G016201 Sobic010G144400 Sobic010G144400 Sobic004G172700--Sobic010G144400 Sobic004G172700--Sobic002G282400 Sobic004G172700--Sobic002G261800 Sobic004G172700--Sobic003G249800 Sobic007G126100 Sobic007G126100 Sobic004G172700--Sobic007G126100 Sobic007G095400 Sobic007G095400 Sobic004G172700--Sobic007G095400 Sobic002G328300 Sobic002G328300 Sobic004G172700--Sobic002G328300 Sobic004G172700--Sobic001G064800 Sobic008G129400 Sobic008G129400 Sobic001G445800--Sobic008G129400 Sobic003G321700 Sobic003G321700 Sobic001G445800--Sobic003G321700 Sobic002G078400 Sobic002G078400 Sobic001G445800--Sobic002G078400 Sobic001G445800--Sobic003G249800 Sobic001G445800--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic001G445800--Sobic010G018400 Sobic001G445800--Sobic010G154700 Sobic001G445800--Sobic001G019900 Sobic002G190900 Sobic002G190900 Sobic001G445800--Sobic002G190900 Sobic002G263800 Sobic002G263800 Sobic009G016201--Sobic002G263800 Sobic009G016201--Sobic007G095400 Sobic008G132800 Sobic008G132800 Sobic009G016201--Sobic008G132800 Sobic009G016201--Sobic004G172700 Sobic009G016201--Sobic003G249800 Sobic009G016201--Sobic001G037000 Sobic008G161000 Sobic008G161000 Sobic009G016201--Sobic008G161000 Sobic010G237000 Sobic010G237000 Sobic009G016201--Sobic010G237000 Sobic010G029400 Sobic010G029400 Sobic009G016201--Sobic010G029400 Sobic002G264400 Sobic002G264400 Sobic002G180600--Sobic002G264400 Sobic006G264300 Sobic006G264300 Sobic002G180600--Sobic006G264300 Sobic002G180600--Sobic002G282400 Sobic010G253800 Sobic010G253800 Sobic002G180600--Sobic010G253800 Sobic002G180600--Sobic006G141500 Sobic002G249000 Sobic002G249000 Sobic002G180600--Sobic002G249000 Sobic003G333400 Sobic003G333400 Sobic002G180600--Sobic003G333400 Sobic001G329100 Sobic001G329100 Sobic002G180600--Sobic001G329100 Sobic010G071900 Sobic010G071900 Sobic002G180600--Sobic010G071900
Octagon: transcription factors


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