Gene annotation
Transcriptome id Sobic.002G180600.1
Synonym Sb02g022930
Functional annotation expressed protein
UniProt C5XAN9
Pfam PF05254
Panther DB PTHR21329
NCBI CDD -
KEGG Orthology K17968; TRIAP1, TRIAP1/MDM35 family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33100 : -
RAP-DB (Rice) LOC_Os09g19750.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ89923 , KQJ89951 , KQJ89952
Barley HORVU5Hr1G057100.2 , HORVU5Hr1G057100.1
Wheat TraesCS5A02G194000 , TraesCS5B02G189300 , TraesCS5D02G196400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
2 Sobic.006G264300 GA18008-PA, putative, expressed -
3 Sobic.002G282400 expressed protein -
4 Sobic.010G253800 expressed protein -
5 Sobic.006G141500 expressed protein -
6 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
7 Sobic.003G333400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
9 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
10 Sobic.005G195100 expressed protein -
11 Sobic.002G261800 snRK1-interacting protein 1, putative, expressed -
12 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
13 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
14 Sobic.002G296300 expressed protein -
15 Sobic.006G204300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
16 Sobic.008G107500 WRKY96, expressed -
17 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
18 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
20 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1


Gene co-expression network
sample Sobic002G180600 Sobic002G180600 Sobic002G264400 Sobic002G264400 Sobic002G180600--Sobic002G264400 Sobic006G264300 Sobic006G264300 Sobic002G180600--Sobic006G264300 Sobic002G282400 Sobic002G282400 Sobic002G180600--Sobic002G282400 Sobic010G253800 Sobic010G253800 Sobic002G180600--Sobic010G253800 Sobic006G141500 Sobic006G141500 Sobic002G180600--Sobic006G141500 Sobic002G249000 Sobic002G249000 Sobic002G180600--Sobic002G249000 Sobic003G333400 Sobic003G333400 Sobic002G180600--Sobic003G333400 Sobic001G329100 Sobic001G329100 Sobic002G180600--Sobic001G329100 Sobic010G071900 Sobic010G071900 Sobic002G180600--Sobic010G071900 Sobic002G264400--Sobic006G264300 Sobic004G293700 Sobic004G293700 Sobic002G264400--Sobic004G293700 Sobic002G267500 Sobic002G267500 Sobic002G264400--Sobic002G267500 Sobic002G264400--Sobic002G180600 Sobic003G253000 Sobic003G253000 Sobic002G264400--Sobic003G253000 Sobic002G202300 Sobic002G202300 Sobic002G264400--Sobic002G202300 Sobic002G264400--Sobic010G253800 Sobic005G034400 Sobic005G034400 Sobic002G264400--Sobic005G034400 Sobic003G075500 Sobic003G075500 Sobic002G264400--Sobic003G075500 Sobic006G264300--Sobic002G264400 Sobic002G083266 Sobic002G083266 Sobic006G264300--Sobic002G083266 Sobic006G264300--Sobic002G202300 Sobic006G264300--Sobic002G180600 Sobic006G264300--Sobic002G267500 Sobic006G264300--Sobic001G329100 Sobic009G149400 Sobic009G149400 Sobic006G264300--Sobic009G149400 Sobic006G264300--Sobic005G034400 Sobic006G264300--Sobic003G253000 Sobic003G249800 Sobic003G249800 Sobic002G282400--Sobic003G249800 Sobic010G243200 Sobic010G243200 Sobic002G282400--Sobic010G243200 Sobic009G143400 Sobic009G143400 Sobic002G282400--Sobic009G143400 Sobic002G282400--Sobic006G141500 Sobic003G181500 Sobic003G181500 Sobic002G282400--Sobic003G181500 Sobic001G037000 Sobic001G037000 Sobic002G282400--Sobic001G037000 Sobic001G071100 Sobic001G071100 Sobic002G282400--Sobic001G071100 Sobic002G211900 Sobic002G211900 Sobic002G282400--Sobic002G211900 Sobic002G393000 Sobic002G393000 Sobic002G282400--Sobic002G393000 Sobic009G146100 Sobic009G146100 Sobic010G253800--Sobic009G146100 Sobic010G253800--Sobic004G293700 Sobic010G083700 Sobic010G083700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic002G352700 Sobic002G352700 Sobic010G253800--Sobic002G352700 Sobic001G007200 Sobic001G007200 Sobic010G253800--Sobic001G007200 Sobic006G263900 Sobic006G263900 Sobic010G253800--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic010G253800--Sobic009G171700 Sobic001G054200 Sobic001G054200 Sobic010G253800--Sobic001G054200 Sobic006G141500--Sobic003G253000 Sobic006G141500--Sobic010G243200 Sobic006G141500--Sobic002G282400 Sobic002G218000 Sobic002G218000 Sobic006G141500--Sobic002G218000 Sobic004G300900 Sobic004G300900 Sobic006G141500--Sobic004G300900 Sobic003G350300 Sobic003G350300 Sobic006G141500--Sobic003G350300 Sobic008G161800 Sobic008G161800 Sobic006G141500--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic006G141500--Sobic004G248800 Sobic002G046100 Sobic002G046100 Sobic006G141500--Sobic002G046100 Sobic004G277000 Sobic004G277000 Sobic002G249000--Sobic004G277000 Sobic001G010400 Sobic001G010400 Sobic002G249000--Sobic001G010400 Sobic004G050000 Sobic004G050000 Sobic002G249000--Sobic004G050000 Sobic009G003900 Sobic009G003900 Sobic002G249000--Sobic009G003900 Sobic010G224200 Sobic010G224200 Sobic002G249000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic002G249000--Sobic005G117400 Sobic010G176700 Sobic010G176700 Sobic002G249000--Sobic010G176700 Sobic002G249000--Sobic002G180600 Sobic004G307000 Sobic004G307000 Sobic002G249000--Sobic004G307000 Sobic007G195100 Sobic007G195100 Sobic003G333400--Sobic007G195100 Sobic003G333400--Sobic009G146100 Sobic003G333400--Sobic002G180600 Sobic008G179500 Sobic008G179500 Sobic003G333400--Sobic008G179500 Sobic004G276100 Sobic004G276100 Sobic003G333400--Sobic004G276100 Sobic003G333400--Sobic004G277000 Sobic003G333400--Sobic002G249000 Sobic003G333400--Sobic004G050000 Sobic003G333400--Sobic003G253000 Sobic001G329100--Sobic006G264300 Sobic005G195200 Sobic005G195200 Sobic001G329100--Sobic005G195200 Sobic001G329100--Sobic002G264400 Sobic004G167400 Sobic004G167400 Sobic001G329100--Sobic004G167400 Sobic001G329100--Sobic002G180600 Sobic003G117900 Sobic003G117900 Sobic001G329100--Sobic003G117900 Sobic001G329100--Sobic010G253800 Sobic002G122700 Sobic002G122700 Sobic001G329100--Sobic002G122700 Sobic006G254800 Sobic006G254800 Sobic001G329100--Sobic006G254800 Sobic010G072000 Sobic010G072000 Sobic010G071900--Sobic010G072000 Sobic005G213200 Sobic005G213200 Sobic010G071900--Sobic005G213200 Sobic010G185500 Sobic010G185500 Sobic010G071900--Sobic010G185500 Sobic001G100700 Sobic001G100700 Sobic010G071900--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic010G071900--Sobic009G120000 Sobic009G106800 Sobic009G106800 Sobic010G071900--Sobic009G106800 Sobic001G319500 Sobic001G319500 Sobic010G071900--Sobic001G319500 Sobic003G206900 Sobic003G206900 Sobic010G071900--Sobic003G206900 Sobic005G084600 Sobic005G084600 Sobic010G071900--Sobic005G084600
Octagon: transcription factors


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