Gene annotation
Transcriptome id Sobic.010G071900.2
Synonym ATCAD1, SbCAD4-4;SbCAD4-4;SbCAD5, Sb10g006280, CAD1
Functional annotation Cinnamyl alcohol dehydrogenase (PubMedID : 28606901)
Cinnamyl alcohol dehydrogenase (PubMedID : 19087955)
a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)
dehydrogenase, putative, expressed
UniProt A0A1W0VRT6
Pfam PF00107 PF08240
Panther DB PTHR11695 PTHR11695:SF506
NCBI CDD KOG0023; Alcohol dehydrogenase, class V
KEGG Orthology K00083; cinnamyl-alcohol dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G72680 : cinnamyl-alcohol dehydrogenase
RAP-DB (Rice) LOC_Os10g11810.2 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a009708 , Zm00025a049694
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G072000 "s cinnamyl alcohol dehydrogenases, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
3 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
4 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
5 Sobic.009G120000 - -
6 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.001G319500 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.003G206900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.005G084600 ARGOS, putative, expressed -
10 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
12 Sobic.010G019900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.008G032100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
15 Sobic.003G228000 cytochrome P450 72A1, putative, expressed -
16 Sobic.010G209900 phospholipase D. Active site motif family protein, expressed K16860: phospholipase D3/4
17 Sobic.006G264300 GA18008-PA, putative, expressed -
18 Sobic.006G199100 pathogenesis-related Bet v I family protein, putative, expressed -
19 Sobic.005G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G149400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase


Gene co-expression network
sample Sobic010G071900 Sobic010G071900 Sobic010G072000 Sobic010G072000 Sobic010G071900--Sobic010G072000 Sobic005G213200 Sobic005G213200 Sobic010G071900--Sobic005G213200 Sobic010G185500 Sobic010G185500 Sobic010G071900--Sobic010G185500 Sobic001G100700 Sobic001G100700 Sobic010G071900--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic010G071900--Sobic009G120000 Sobic009G106800 Sobic009G106800 Sobic010G071900--Sobic009G106800 Sobic001G319500 Sobic001G319500 Sobic010G071900--Sobic001G319500 Sobic003G206900 Sobic003G206900 Sobic010G071900--Sobic003G206900 Sobic005G084600 Sobic005G084600 Sobic010G071900--Sobic005G084600 Sobic010G072000--Sobic010G071900 Sobic004G277000 Sobic004G277000 Sobic010G072000--Sobic004G277000 Sobic003G075500 Sobic003G075500 Sobic010G072000--Sobic003G075500 Sobic006G264300 Sobic006G264300 Sobic010G072000--Sobic006G264300 Sobic002G180600 Sobic002G180600 Sobic010G072000--Sobic002G180600 Sobic009G003900 Sobic009G003900 Sobic010G072000--Sobic009G003900 Sobic002G264400 Sobic002G264400 Sobic010G072000--Sobic002G264400 Sobic010G072000--Sobic010G185500 Sobic002G267500 Sobic002G267500 Sobic010G072000--Sobic002G267500 Sobic005G213200--Sobic001G100700 Sobic001G243600 Sobic001G243600 Sobic005G213200--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic005G213200--Sobic001G243500 Sobic005G213200--Sobic009G120000 Sobic005G213200--Sobic009G106800 Sobic001G444400 Sobic001G444400 Sobic005G213200--Sobic001G444400 Sobic004G273400 Sobic004G273400 Sobic005G213200--Sobic004G273400 Sobic005G213200--Sobic010G071900 Sobic010G209900 Sobic010G209900 Sobic005G213200--Sobic010G209900 Sobic008G033600 Sobic008G033600 Sobic010G185500--Sobic008G033600 Sobic010G185500--Sobic010G071900 Sobic010G185500--Sobic002G264400 Sobic010G185500--Sobic003G206900 Sobic008G189300 Sobic008G189300 Sobic010G185500--Sobic008G189300 Sobic010G185500--Sobic006G264300 Sobic010G019900 Sobic010G019900 Sobic010G185500--Sobic010G019900 Sobic010G243200 Sobic010G243200 Sobic010G185500--Sobic010G243200 Sobic003G228000 Sobic003G228000 Sobic010G185500--Sobic003G228000 Sobic001G100700--Sobic005G213200 Sobic001G100700--Sobic001G243500 Sobic001G100700--Sobic001G444400 Sobic001G100700--Sobic001G243600 Sobic001G100700--Sobic009G106800 Sobic001G100700--Sobic009G120000 Sobic001G100700--Sobic004G273400 Sobic001G100700--Sobic010G209900 Sobic003G129000 Sobic003G129000 Sobic001G100700--Sobic003G129000 Sobic004G166700 Sobic004G166700 Sobic009G120000--Sobic004G166700 Sobic007G141500 Sobic007G141500 Sobic009G120000--Sobic007G141500 Sobic005G051200 Sobic005G051200 Sobic009G120000--Sobic005G051200 Sobic001G317200 Sobic001G317200 Sobic009G120000--Sobic001G317200 Sobic009G120000--Sobic005G084600 Sobic003G117600 Sobic003G117600 Sobic009G120000--Sobic003G117600 Sobic006G092500 Sobic006G092500 Sobic009G120000--Sobic006G092500 Sobic009G120000--Sobic001G243600 Sobic009G120000--Sobic005G213200 Sobic009G106800--Sobic001G444400 Sobic010G084400 Sobic010G084400 Sobic009G106800--Sobic010G084400 Sobic009G196400 Sobic009G196400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic004G111800 Sobic004G111800 Sobic009G106800--Sobic004G111800 Sobic009G106800--Sobic005G213200 Sobic009G106800--Sobic001G243600 Sobic003G252800 Sobic003G252800 Sobic009G106800--Sobic003G252800 Sobic006G153100 Sobic006G153100 Sobic009G106800--Sobic006G153100 Sobic006G173900 Sobic006G173900 Sobic001G319500--Sobic006G173900 Sobic001G319600 Sobic001G319600 Sobic001G319500--Sobic001G319600 Sobic005G101800 Sobic005G101800 Sobic001G319500--Sobic005G101800 Sobic010G099900 Sobic010G099900 Sobic001G319500--Sobic010G099900 Sobic010G117900 Sobic010G117900 Sobic001G319500--Sobic010G117900 Sobic002G393000 Sobic002G393000 Sobic001G319500--Sobic002G393000 Sobic008G136400 Sobic008G136400 Sobic001G319500--Sobic008G136400 Sobic001G400700 Sobic001G400700 Sobic001G319500--Sobic001G400700 Sobic002G183200 Sobic002G183200 Sobic001G319500--Sobic002G183200 Sobic003G206900--Sobic010G071900 Sobic003G240600 Sobic003G240600 Sobic003G206900--Sobic003G240600 Sobic003G206900--Sobic010G019900 Sobic005G038900 Sobic005G038900 Sobic003G206900--Sobic005G038900 Sobic004G304100 Sobic004G304100 Sobic003G206900--Sobic004G304100 Sobic003G206900--Sobic010G185500 Sobic005G092900 Sobic005G092900 Sobic003G206900--Sobic005G092900 Sobic004G107700 Sobic004G107700 Sobic003G206900--Sobic004G107700 Sobic007G148000 Sobic007G148000 Sobic003G206900--Sobic007G148000 Sobic004G176600 Sobic004G176600 Sobic005G084600--Sobic004G176600 Sobic001G339700 Sobic001G339700 Sobic005G084600--Sobic001G339700 Sobic005G084600--Sobic009G120000 Sobic008G032100 Sobic008G032100 Sobic005G084600--Sobic008G032100 Sobic005G206601 Sobic005G206601 Sobic005G084600--Sobic005G206601 Sobic002G375400 Sobic002G375400 Sobic005G084600--Sobic002G375400 Sobic010G009300 Sobic010G009300 Sobic005G084600--Sobic010G009300 Sobic010G185000 Sobic010G185000 Sobic005G084600--Sobic010G185000 Sobic003G417800 Sobic003G417800 Sobic005G084600--Sobic003G417800
Octagon: transcription factors


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