Gene annotation
Transcriptome id Sobic.010G072000.1
Synonym CAD;SbCAD4-3;SbCAD4-3, ATCAD1, Sb10g006290, CAD1
Functional annotation "s cinnamyl alcohol dehydrogenases, the MYB transcription factor binding domain AACG element" (PubMedID : 24045932)
Cinnamyl alcohol dehydrogenase (PubMedID : 28606901)
Cinnamyl alcohol dehydrogenase (PubMedID : 19087955)
dehydrogenase, putative, expressed
UniProt C5Z5Y6
Pfam PF00107 PF08240
Panther DB PTHR11695 PTHR11695:SF506
NCBI CDD KOG0023; Alcohol dehydrogenase, class V
KEGG Orthology K00083; cinnamyl-alcohol dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G72680 : cinnamyl-alcohol dehydrogenase
RAP-DB (Rice) LOC_Os10g11810.2 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a049694
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G072000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.004G277000 purine permease, putative, expressed -
3 Sobic.003G075500 mitochondrial carrier protein, putative, expressed -
4 Sobic.006G264300 GA18008-PA, putative, expressed -
5 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
6 Sobic.009G003900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
7 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
8 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
9 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.001G026900 cytidine deaminase, putative, expressed -
11 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
12 Sobic.006G199100 pathogenesis-related Bet v I family protein, putative, expressed -
13 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
14 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
15 Sobic.001G319500 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
17 Sobic.002G057300 expressed protein -
18 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
19 Sobic.009G149400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
20 Sobic.002G090200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytidine deaminase, putative, expressed -


Gene co-expression network
sample Sobic010G072000 Sobic010G072000 Sobic010G071900 Sobic010G071900 Sobic010G072000--Sobic010G071900 Sobic004G277000 Sobic004G277000 Sobic010G072000--Sobic004G277000 Sobic003G075500 Sobic003G075500 Sobic010G072000--Sobic003G075500 Sobic006G264300 Sobic006G264300 Sobic010G072000--Sobic006G264300 Sobic002G180600 Sobic002G180600 Sobic010G072000--Sobic002G180600 Sobic009G003900 Sobic009G003900 Sobic010G072000--Sobic009G003900 Sobic002G264400 Sobic002G264400 Sobic010G072000--Sobic002G264400 Sobic010G185500 Sobic010G185500 Sobic010G072000--Sobic010G185500 Sobic002G267500 Sobic002G267500 Sobic010G072000--Sobic002G267500 Sobic010G071900--Sobic010G072000 Sobic005G213200 Sobic005G213200 Sobic010G071900--Sobic005G213200 Sobic010G071900--Sobic010G185500 Sobic001G100700 Sobic001G100700 Sobic010G071900--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic010G071900--Sobic009G120000 Sobic009G106800 Sobic009G106800 Sobic010G071900--Sobic009G106800 Sobic001G319500 Sobic001G319500 Sobic010G071900--Sobic001G319500 Sobic003G206900 Sobic003G206900 Sobic010G071900--Sobic003G206900 Sobic005G084600 Sobic005G084600 Sobic010G071900--Sobic005G084600 Sobic004G050000 Sobic004G050000 Sobic004G277000--Sobic004G050000 Sobic009G043600 Sobic009G043600 Sobic004G277000--Sobic009G043600 Sobic002G249000 Sobic002G249000 Sobic004G277000--Sobic002G249000 Sobic004G277000--Sobic009G003900 Sobic004G277000--Sobic002G267500 Sobic006G173900 Sobic006G173900 Sobic004G277000--Sobic006G173900 Sobic004G276100 Sobic004G276100 Sobic004G277000--Sobic004G276100 Sobic009G177800 Sobic009G177800 Sobic004G277000--Sobic009G177800 Sobic004G277000--Sobic002G264400 Sobic003G075500--Sobic002G264400 Sobic003G075500--Sobic006G264300 Sobic003G075500--Sobic004G277000 Sobic003G075500--Sobic010G072000 Sobic001G184000 Sobic001G184000 Sobic003G075500--Sobic001G184000 Sobic003G075500--Sobic009G003900 Sobic001G329100 Sobic001G329100 Sobic003G075500--Sobic001G329100 Sobic003G075500--Sobic002G249000 Sobic002G199900 Sobic002G199900 Sobic003G075500--Sobic002G199900 Sobic006G264300--Sobic002G264400 Sobic002G083266 Sobic002G083266 Sobic006G264300--Sobic002G083266 Sobic002G202300 Sobic002G202300 Sobic006G264300--Sobic002G202300 Sobic006G264300--Sobic002G180600 Sobic006G264300--Sobic002G267500 Sobic006G264300--Sobic001G329100 Sobic009G149400 Sobic009G149400 Sobic006G264300--Sobic009G149400 Sobic005G034400 Sobic005G034400 Sobic006G264300--Sobic005G034400 Sobic003G253000 Sobic003G253000 Sobic006G264300--Sobic003G253000 Sobic002G180600--Sobic002G264400 Sobic002G180600--Sobic006G264300 Sobic002G282400 Sobic002G282400 Sobic002G180600--Sobic002G282400 Sobic010G253800 Sobic010G253800 Sobic002G180600--Sobic010G253800 Sobic006G141500 Sobic006G141500 Sobic002G180600--Sobic006G141500 Sobic002G180600--Sobic002G249000 Sobic003G333400 Sobic003G333400 Sobic002G180600--Sobic003G333400 Sobic002G180600--Sobic001G329100 Sobic002G180600--Sobic010G071900 Sobic009G003900--Sobic004G277000 Sobic009G003900--Sobic002G249000 Sobic009G003900--Sobic004G050000 Sobic005G117400 Sobic005G117400 Sobic009G003900--Sobic005G117400 Sobic009G003900--Sobic002G264400 Sobic009G003900--Sobic001G184000 Sobic002G090200 Sobic002G090200 Sobic009G003900--Sobic002G090200 Sobic009G003900--Sobic002G180600 Sobic009G003900--Sobic010G072000 Sobic002G264400--Sobic006G264300 Sobic004G293700 Sobic004G293700 Sobic002G264400--Sobic004G293700 Sobic002G264400--Sobic002G267500 Sobic002G264400--Sobic002G180600 Sobic002G264400--Sobic003G253000 Sobic002G264400--Sobic002G202300 Sobic002G264400--Sobic010G253800 Sobic002G264400--Sobic005G034400 Sobic002G264400--Sobic003G075500 Sobic008G033600 Sobic008G033600 Sobic010G185500--Sobic008G033600 Sobic010G185500--Sobic010G071900 Sobic010G185500--Sobic002G264400 Sobic010G185500--Sobic003G206900 Sobic008G189300 Sobic008G189300 Sobic010G185500--Sobic008G189300 Sobic010G185500--Sobic006G264300 Sobic010G019900 Sobic010G019900 Sobic010G185500--Sobic010G019900 Sobic010G243200 Sobic010G243200 Sobic010G185500--Sobic010G243200 Sobic003G228000 Sobic003G228000 Sobic010G185500--Sobic003G228000 Sobic001G281400 Sobic001G281400 Sobic002G267500--Sobic001G281400 Sobic004G272800 Sobic004G272800 Sobic002G267500--Sobic004G272800 Sobic002G046100 Sobic002G046100 Sobic002G267500--Sobic002G046100 Sobic002G267500--Sobic003G253000 Sobic010G149300 Sobic010G149300 Sobic002G267500--Sobic010G149300 Sobic002G345300 Sobic002G345300 Sobic002G267500--Sobic002G345300 Sobic001G459200 Sobic001G459200 Sobic002G267500--Sobic001G459200 Sobic009G143400 Sobic009G143400 Sobic002G267500--Sobic009G143400 Sobic002G267500--Sobic006G173900
Octagon: transcription factors


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