Gene annotation
Transcriptome id Sobic.006G264300.3
Synonym Sb06g032700
Functional annotation GA18008-PA, putative, expressed
UniProt A0A1B6PP24
Pfam PF08241 PF05093
Panther DB PTHR13273
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process GO:0016226iron-sulfur cluster assembly GO:0005737cytoplasm


Orthologs (automatic annotation)
TAIR AT5G18400 : Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
RAP-DB (Rice) LOC_Os04g57810.1 : GA18008-PA, putative, expressed
MaizeGDB (Corn) Zm00025a009330 , Zm00025a009323
Brachypodium KQK15888
Barley HORVU2Hr1G120230.7 , HORVU2Hr1G120230.5 , HORVU2Hr1G120230.8 , HORVU2Hr1G120230.6 , HORVU2Hr1G120230.4 , HORVU2Hr1G120230.2 , HORVU2Hr1G120230.3 , HORVU2Hr1G120230.1
Wheat TraesCS2B02G585100 , TraesCS2B02G585100 , TraesCS2A02G553500 , TraesCS2A02G553500 , TraesCS5A02G262300 , TraesCS3D02G385000 , TraesCS2D02G555000 , TraesCS2D02G555000
Populus -


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cDNA sequences
Sobic.006G264300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
2 Sobic.002G083266 - K00326: cytochrome-b5 reductase
3 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
4 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
5 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
7 Sobic.009G149400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
8 Sobic.005G034400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
9 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
10 Sobic.003G220600 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
11 Sobic.010G204300 expressed protein -
12 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
13 Sobic.003G075500 mitochondrial carrier protein, putative, expressed -
14 Sobic.001G415000 expressed protein -
15 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
16 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
17 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
18 Sobic.010G253800 expressed protein -
19 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
20 Sobic.006G141500 expressed protein -


Gene co-expression network
sample Sobic006G264300 Sobic006G264300 Sobic002G264400 Sobic002G264400 Sobic006G264300--Sobic002G264400 Sobic002G083266 Sobic002G083266 Sobic006G264300--Sobic002G083266 Sobic002G202300 Sobic002G202300 Sobic006G264300--Sobic002G202300 Sobic002G180600 Sobic002G180600 Sobic006G264300--Sobic002G180600 Sobic002G267500 Sobic002G267500 Sobic006G264300--Sobic002G267500 Sobic001G329100 Sobic001G329100 Sobic006G264300--Sobic001G329100 Sobic009G149400 Sobic009G149400 Sobic006G264300--Sobic009G149400 Sobic005G034400 Sobic005G034400 Sobic006G264300--Sobic005G034400 Sobic003G253000 Sobic003G253000 Sobic006G264300--Sobic003G253000 Sobic002G264400--Sobic006G264300 Sobic004G293700 Sobic004G293700 Sobic002G264400--Sobic004G293700 Sobic002G264400--Sobic002G267500 Sobic002G264400--Sobic002G180600 Sobic002G264400--Sobic003G253000 Sobic002G264400--Sobic002G202300 Sobic010G253800 Sobic010G253800 Sobic002G264400--Sobic010G253800 Sobic002G264400--Sobic005G034400 Sobic003G075500 Sobic003G075500 Sobic002G264400--Sobic003G075500 Sobic003G367451 Sobic003G367451 Sobic002G083266--Sobic003G367451 Sobic002G083266--Sobic006G264300 Sobic001G415000 Sobic001G415000 Sobic002G083266--Sobic001G415000 Sobic009G111600 Sobic009G111600 Sobic002G083266--Sobic009G111600 Sobic001G224400 Sobic001G224400 Sobic002G083266--Sobic001G224400 Sobic006G062800 Sobic006G062800 Sobic002G083266--Sobic006G062800 Sobic002G261900 Sobic002G261900 Sobic002G083266--Sobic002G261900 Sobic010G213400 Sobic010G213400 Sobic002G083266--Sobic010G213400 Sobic004G272800 Sobic004G272800 Sobic002G083266--Sobic004G272800 Sobic002G202300--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic002G202300--Sobic003G220600 Sobic006G141500 Sobic006G141500 Sobic002G202300--Sobic006G141500 Sobic002G202300--Sobic006G264300 Sobic002G046100 Sobic002G046100 Sobic002G202300--Sobic002G046100 Sobic003G115800 Sobic003G115800 Sobic002G202300--Sobic003G115800 Sobic010G204300 Sobic010G204300 Sobic002G202300--Sobic010G204300 Sobic002G202300--Sobic006G062800 Sobic006G182100 Sobic006G182100 Sobic002G202300--Sobic006G182100 Sobic002G180600--Sobic002G264400 Sobic002G180600--Sobic006G264300 Sobic002G282400 Sobic002G282400 Sobic002G180600--Sobic002G282400 Sobic002G180600--Sobic010G253800 Sobic002G180600--Sobic006G141500 Sobic002G249000 Sobic002G249000 Sobic002G180600--Sobic002G249000 Sobic003G333400 Sobic003G333400 Sobic002G180600--Sobic003G333400 Sobic002G180600--Sobic001G329100 Sobic010G071900 Sobic010G071900 Sobic002G180600--Sobic010G071900 Sobic001G281400 Sobic001G281400 Sobic002G267500--Sobic001G281400 Sobic002G267500--Sobic004G272800 Sobic002G267500--Sobic002G046100 Sobic002G267500--Sobic003G253000 Sobic010G149300 Sobic010G149300 Sobic002G267500--Sobic010G149300 Sobic002G345300 Sobic002G345300 Sobic002G267500--Sobic002G345300 Sobic001G459200 Sobic001G459200 Sobic002G267500--Sobic001G459200 Sobic009G143400 Sobic009G143400 Sobic002G267500--Sobic009G143400 Sobic006G173900 Sobic006G173900 Sobic002G267500--Sobic006G173900 Sobic001G329100--Sobic006G264300 Sobic005G195200 Sobic005G195200 Sobic001G329100--Sobic005G195200 Sobic001G329100--Sobic002G264400 Sobic004G167400 Sobic004G167400 Sobic001G329100--Sobic004G167400 Sobic001G329100--Sobic002G180600 Sobic003G117900 Sobic003G117900 Sobic001G329100--Sobic003G117900 Sobic001G329100--Sobic010G253800 Sobic002G122700 Sobic002G122700 Sobic001G329100--Sobic002G122700 Sobic006G254800 Sobic006G254800 Sobic001G329100--Sobic006G254800 Sobic002G187500 Sobic002G187500 Sobic009G149400--Sobic002G187500 Sobic009G149400--Sobic001G281400 Sobic003G285800 Sobic003G285800 Sobic009G149400--Sobic003G285800 Sobic009G149400--Sobic002G267500 Sobic009G149400--Sobic004G272800 Sobic010G023800 Sobic010G023800 Sobic009G149400--Sobic010G023800 Sobic001G433700 Sobic001G433700 Sobic009G149400--Sobic001G433700 Sobic004G284500 Sobic004G284500 Sobic009G149400--Sobic004G284500 Sobic007G171000 Sobic007G171000 Sobic009G149400--Sobic007G171000 Sobic008G033600 Sobic008G033600 Sobic005G034400--Sobic008G033600 Sobic004G055200 Sobic004G055200 Sobic005G034400--Sobic004G055200 Sobic005G034400--Sobic001G459200 Sobic004G020000 Sobic004G020000 Sobic005G034400--Sobic004G020000 Sobic005G034400--Sobic003G253000 Sobic005G034400--Sobic002G264400 Sobic005G034400--Sobic001G224400 Sobic005G034400--Sobic002G267500 Sobic001G288800 Sobic001G288800 Sobic005G034400--Sobic001G288800 Sobic003G253000--Sobic006G141500 Sobic004G049900 Sobic004G049900 Sobic003G253000--Sobic004G049900 Sobic003G253000--Sobic002G267500 Sobic003G253000--Sobic004G272800 Sobic003G253000--Sobic001G459200 Sobic003G253000--Sobic002G345300 Sobic003G253000--Sobic002G046100 Sobic009G185800 Sobic009G185800 Sobic003G253000--Sobic009G185800 Sobic006G108400 Sobic006G108400 Sobic003G253000--Sobic006G108400
Octagon: transcription factors


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